Conserved Protein Domain Family
PRK12523

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PRK12523: PRK12523 
RNA polymerase sigma factor; Reviewed
Statistics
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PSSM-Id: 183572
Aligned: 16 rows
Threshold Bit Score: 305.622
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
116054201   1 MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAA 80 
15595669    1 MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAA 80 
152987247   1 MAAGEVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLLIDHFRRAA 80 
218889212   1 MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAA 80 
77461408    1 MSSAQSPHSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGRDELLTPREPRAFLVAIAKGLLFDYFRRAA 80 
229593002   1 MSSIQNPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDELREPREPRAFLIAIAKGLLFDYFRRAA 80 
70732989    1 MSSVQSPHNELVGALYRDHRGWLLAWLRRNVACSQRAEDLSQDTFVRLLGRDELKAPREPRAFLVAIAKGLLFDYFRRAA 80 
71733678    1 MSSVPSTHSEIVGALYRDHRGWLLAWLRRNVACPQRAQDLSQDTFVRLLGRQELLTPREPRAFLAAVAKGLMFDYFRRAA 80 
66047955    1 MSSVPSTHSEIVGALYRDHRGWLLAWLRRNVACPQRAQDLSQDTFVRLLGRHELLAPREPRAFLATVAKGLMFDHFRRAA 80 
28867674    1 MSSVPSAHSEIVGALYRDHRGWLLAWLRRNVACPQRAQDLSQDTFVRLLGRDELQLPREPRAFLATIAKGLMFDYFRRAA 80 
116054201  81 LEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGL 160
15595669   81 LEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGL 160
152987247  81 LEQAYLAELALVPEAEQPSAEERYLILEDLREIDRLLGTLSLKARSAFLYNRLDGMPHAEIAERLGVSVPRVRQYLAQGL 160
218889212  81 LEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGL 160
77461408   81 LEQAYLTELMLIPEGEQPSVEEQQLILEDLKAIDRMLDKLSTKARAAFLYNRLDGLTHAEIADKLGVSVPRVRQYLAQGI 160
229593002  81 LEQAYLTELMLIPESEHPSPEAQQLILEDLKAIDRLLGKLSSKARAAFLYNRLDGMGHADIAQRLGVSVPRVRQYLAQGI 160
70732989   81 LEQAYLSELMLIPEGEQPSPEEQQMILEDLKAIDRLLGKLSSKARMAFLYNRLDGLSHAEIAERLGVSVPRVRQYLAQGI 160
71733678   81 LEQAYLGELMQVPEAEQPSPEEQMLILEDLKAIDRMLGSLSSKARAAFLYSRLDGLSHGEIAERLGVSVSRVRQYLAQAM 160
66047955   81 LEQAYLGELMQVPEAEQPSPEEQLLIVEDLKAIDRMLGTLSSKARAAFLYSRLDGMSHAEIAEQLGVSVSRVRQYLAQAM 160
28867674   81 LEQAYLGELLQVPEAEQPSPEEQLLILEDLKAIDRMLGTLSSKARAAFLYNRLDGLSHGEIAERLGVSVSRVRQYLAQAV 160
116054201 161 RQCYIALYGEPR 172
15595669  161 RQCYIALYGEPR 172
152987247 161 RQCYIALYGEPR 172
218889212 161 RQCYIALYGEPR 172
77461408  161 RQCYIALYGEPT 172
229593002 161 RQCYIALYGEPQ 172
70732989  161 RQCYIALYGEPL 172
71733678  161 RQCYVALYGEPT 172
66047955  161 RQCYVALYGEPT 172
28867674  161 RQCYVALYGEPT 172
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