Conserved Protein Domain Family
PRK12520

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PRK12520: PRK12520 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 237126
Aligned: 13 rows
Threshold Bit Score: 282.39
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17544753    1 MTIAPEQ----LDALRPHLLRFAQLQLRDPALAEDVVADTVLAVLEHPERFAGNASLKTYVIGILKHKIIDAIRSGRREV 76 
171059216   1 MTDLASQ----LQGLREPLMRYARKQLRNEAWAEDAVSETLLAALEKPQQFAGQSQLKTWLVGILKHKLVDQIRRHGREI 76 
152981894   6 SSAPPTEltrgLESLRPALLRFALLQLRDQALAEDVVQDALIAVLEKPDSFAGQSSLRTYVTAIMKYKIIDALRAGQRTR 85 
300705561   1 MAIAPEQ----LDALRPHLLRFAQLQLRDPALAEDVVADSLLAVLEHPERFAGNASLKTYVIGILKHKIVDAIRSGRREV 76 
300692958   1 MAIAPEQ----LDALRPHLLRFAQLQLRDPALAEDVVADTVLAVLEHPERFAGNASLKTYVIGILKHKIIDAIRSGRREV 76 
187930779   1 MAIAPDQ----LDALRPHLLRFAQLQLRDTALAEDTVADTILAVLEHPERFAGNASLKTYVIGILKHKIIDAIRSGRREV 76 
241664969   1 MAIAPDQ----LDALRPHLLRFAQLQLRDTALAEDTVADTILAVLEHPERFAGNASLKTYVIGILKHKIIDAIRSGRREV 76 
91790714    1 MPTFEEQ----LVEHRVYLMRFARLQLRSDDWAEDAVSETLLAALSKPQSFGNRSQLKTWLVGILKHKVIDLIRSNARLV 76 
121605255   6 PGAFEQQ----IASHRDYLLRFARLQLRNDTWAEDAVSETVLAALARPQAFERRSQLKTWLVGILKHKVIDALRLQGREV 81 
73539885    1 MPHDTAD----LETLRPHLLRFARLQLRDEALAEDAVSDTLLAVLEHPERFAGQSALKTYLVGILKHKIIDLLRSGRREV 76 
194292899   1 MSLDHAE----LHALRPYLLRFARLQLRDEAVAEDAVSETLLAVLEHPERFAGQSALRTYLVGILKHKIIDALRSGKREV 76 
116696349   1 MSLDPAE----LQAIRPYLLRFARLQLRDQALAEDAVSETLLAALEHPERFAGQSTLRTYLVGILKHKIIDTLRSGKREV 76 
124268145   1 MTDVSAL----LETLRPQLLRYAQLQLRNPAWAEDAVSETILAALEKPEAFAGRAAPKTWLIGILKHKLVDQVRRHAREC 76 
17544753   77 RVSLlaggasdetdqrTDEAVFDAL-FAADGHYLTPPSDWGNPDAALSRREFFDILQMCVDRLPPRVGRVFMMREWLELE 155
171059216  77 SATP------------DDDQDIDDLlFKADGHWREAPHEWGNPEASLGQRQFIEVLDACVEHLPGQQGQVFMMREWLELE 144
152981894  86 QFegh--------deqSDDDLIDAL-FTADGHARETPQAWSDPVATVQEQDFFRVLEICLEKLPAKTARIFMMREWLELE 156
300705561  77 RVSLlaggasdegdlrADEAVFDTL-FAADGHYVTPPSDWGDPDAVLSRREFFDILQMCVDRLPPRVGRVFMMREWLELE 155
300692958  77 RVSLlaggasddadlrSDEAVFDTL-FAVDGHYLTPPSDWGNPDAVLSRREFFDILQMCVDRLPPRVGRVFMMREWLELE 155
187930779  77 RVSLlaggesdeagmrSDEAVFDSL-FAADGHYTSPPSDWGDPDAALSRREFFDVLQMCVDRLPPRVGRVFMMREWLELE 155
241664969  77 RVSLlaggesdeagmrSDEAVFDSL-FAADGHYTSPPSDWGDPDAALSRREFFDVLQMCVDRLPPRVGRVFMMREWLELE 155
91790714   77 AMpda--------qtdEDGDELDRLaFKADGHFAEMPNDWGDPHQTLQQVQFFEVLDACMERLPPALGRLFLMREWLELS 148
121605255  82 SLSPqgd------dagADDLLDQAL-FAPDGHFAELPADWGNPEQELGSRQFFAVLEACAGKLPAAQGRLFLMREWLELS 154
73539885   77 RLALatded---getqSEQDAFDAL-FTRNGHYQDMPSDWGSPDRTLERREFFEILQACVDRLPAKTARVFMMREWLELE 152
194292899  77 RLALaagdd---gqpqSDDDAFDAL-FTRNGHYQDPPSDWGDPERAFERREFFEILQLCVDRLPARTGRIFMMREWLELD 152
116696349  77 RLALatdae---gqrqSDDDAFDAL-FTRNGHYQDPPSDWGNPERAFERREFFEILQLCVDRLPERTGRIFMMREWLELD 152
124268145  77 SMTSde---------dDGATLEEQL-FDETGHFRDAPIEWGDPQAIVAQDQFIKVLDACIEKLPNQLGRVFLMREWMELE 146
17544753  156 TDEICQELEITATNAWALLYRARMRLRACLDLHWFGNQGAAA 197
171059216 145 TTEICNQLGLSSTNLFVLLHRARLRLRDCLQLRWFNHPNPSK 186
152981894 157 TEEICKELDISSSNAWVMLYRARLHLRACLDLNWFGNQPAPR 198
300705561 156 TDEICQELEITATNAWALLYRARMRLRECLDLHWFGNPPTAA 197
300692958 156 TDEICQELEITATNAWALLYRARMRLRECLDLHWFGNPPAAA 197
187930779 156 TDEICQELQITATNAWALLYRARMRLRECLDLHWFGNQPAAA 197
241664969 156 TDEICQELQITATNAWALLYRARMRLRECLDLHWFGNQPTAA 197
91790714  149 SQEVCKELSLTPTNLYVQLHRARLRLQECLNIHWFGKHST-- 188
121605255 155 SEEICKELGLTPTNLYVQLHRARQRLRECLELNWFANPQAL- 195
73539885  153 TEEICQDLEVSATNVWVILYRARMRLRECLELNWFGHQPGLT 194
194292899 153 TEEICQHLQISATNAWAMLYRARMRLRECLELHWFGQRGRPG 194
116696349 153 TEEICQHLQISATNAWAMLYRARMRLRECLELHWFGQRGRPG 194
124268145 147 TDEICKELSVTPTNLWVMLHRARLRLRECLQLNWFGEPALAL 188
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