Conserved Protein Domain Family
PRK12519

?
PRK12519: PRK12519 
RNA polymerase sigma factor; Provisional
Statistics
?
PSSM-Id: 237125
Aligned: 11 rows
Threshold Bit Score: 271.549
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
56752100   2 SLGFSSPTGTSNSDDQDLWSELQQGQVAALARLYDRHAGLVYGIAMQVLGNPQEAEDLTQDIFIRLVdrQHSHYDS---- 77 
37523926   1 MATTELSESMAQPSDAQLFYALRSGERTAMVSLYRRYASVVYGLALSILKNPQEAEDLSQEIFLSLW--RGGGYNP---- 74 
86608654   3 IEGDKAEGSLQEKTDAEVFAALKAGRSQALAILYDRHAGLVYGIACKMLGSTAEAEDLTQDIFLNL---ARSSFDP---- 75 
86606871   1 MGEQPPLRDWPSRSDGELMEAIRERQGAALGVLYDRYAGLVYGLALQILGHVAEAEDLTQAVFVELW--RKASYDP---- 74 
86604793   3 IEDDKAEGSLQERSDAEVFSALKAGQSQALAILYDRHAGLVYGIACKMLGNSAEAEDLTQDIFLSL---ARSSFDP---- 75 
16331536   1 -------MQVVVQDDGEIMAAVQRGDSFALGVLYNRYGAVVYRLALRILQRSQDAEDLTQEIFLSLE--TTTPYNS---- 67 
37520727  33 SAAEHQRNAMDPPSDAEVYVDLKRGNPAVLGVLYDRHGKMVFRLAMRILANSQEAEDLTQEVFLTLW--QKKAYDP---- 106
86608074   1 ------MRDWSSRADWELMEALKAGQPAALAALYDRYAGLVYGLAFKILGHVAEAEDLTQEVFVELW--RKVGCDPrtps 72 
37521333   5 DSSDSRPANLRAGGDVELFRSIKGGQLAALGTLYDRFGGLVHGLALAILTNPQEAEDLTQEVFLSLF--RNCTYDP---- 78 
17229685   4 KQSQSTLTGLTDVTDEALFVGLKNGDSAALSVLFNRHGRLVYGLALKILADSQEAEDLTQEIFLTLW--RKASSNP---- 77 
81300813   2 SLGFSSPTGTSNSDDQDLWSELQQGQVAALARLYDRHAGLVYGIAMQVLGNPQEAEDLTQDIFIRLVdrQHSHYDS---- 77 
56752100  78 ----KRGSLRTYLAVLTRSRAIDRLRSRRTQASAIERVQNQVKQE--------ATEDPPIASLGAAETSAEVQKALAQLP 145
37523926  75 ----ERGSLSSYLMLLTRSRALDKLRARGRKLKMIERVGQVNLGE--------PSGVTPLERATVDECSERVREAVASLP 142
86608654  76 ----RRGSLRTYLSILARSRCLDRLRSWRNRQRPLERGRVELQGS--------PAADPTLEQLAQAERVAEVQTALAELS 143
86606871  75 ----QRGSVSSFLCLLTRSRAIDRLRSQDSSQRLLKHWQSLLAAE--------NRAPAPFEQLSLEERRQAVQEALGQLP 142
86604793  76 ----KRGSLRTYLGILARSRCLDRLRSWRNRQRSLERGRVELQGD--------AAEDPALEQLAGAEQAVEVQTALAQLS 143
16331536  68 ----QRGNLLNFLLTLTRSRALNRIRQGRSRGRLLKACQHNHLTN---------VPNLPMENAALSELSQRVASALETLP 134
37520727 107 ----ARGSLSNYLLTLTRSRAIDRVRSRGSNLRFLQKWTQELGTGt-------APGPSPFERVANAEVAHQVKTALEQLP 175
86608074  73 esreRRGSLSSFLCILTRSRAIDRLRSQGSHQLLLKRWQTILSADrvsgtesfSKTRFPFEQVSIEERRQAVQAALSQLP 152
37521333  79 ----TRGAPSSYLITLTRSRAIDRLRAKGRAAKLMQRWGQSRVVE--------TSPVTPMESASINECSQAVRDALEKLS 146
17229685  78 ----DCRFFVRYLVTITRSRAIDKIRARTRQLKLVEKWGQTMTNEa-------APEPTPVEQASFAERSGRIHNALAQLP 146
81300813  78 ----KRGSLRTYLAVLTRSRAIDRLRSRRTQASAIERVQNQVKQE--------ATEDPPIASLGAAETSAEVQKALAQLP 145
56752100 146 ESQQQVLRLAYYEGLSQSDIAERLSEPLGTIKARARRGLLKLRQMLQDDLS 196
37523926 143 LKERQVLELSVFSGLSYPQIAARTGTPLGTIKRWARKGMLQLKEDLKALIE 193
86608654 144 ESQRQVLKMAYYEGMSQTEIAKQLDLPLGTVKARARRALLRLRELLGGPS- 193
86606871 143 ESQRQVLELIYYQGLSQADVARHLGIPPATVKARARQALCKLRGSLRALLE 193
86604793 144 EHQRQILKMAYYEGMSQTEIAKQLNLPLGTVKARARRGLLRLRELLGGAP- 193
16331536 135 PNQRQVLELAYYEGLSQSEITQKLAIPLGTVKTRSRQGLLKLKNLLQDLVE 185
37520727 176 EAQRQALELAYYEGLSQSEIASRLDTPLGTVKTRSRQGLLKLRNLLRGLVG 226
86608074 153 ENQRQILELLYYQGLSQADIARQLGIPLGTVKTRSRQALCKLRGSLRALLG 203
37521333 147 PNHRRVLEMSYFKELSQREIAEKLGTPLGTVKSWVRRGLSELKETLQEYVG 197
17229685 147 EKQRQVIELAYHQGLSQSEIAKQIDIPLGTVKTSTRQGLLKLKRILLDSDL 197
81300813 146 ESQQQVLRLAYYEGLSQSDIAERLSEPLGTIKARARRGLLKLRQMLQDDLS 196
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap