Conserved Protein Domain Family
PRK12516

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PRK12516: PRK12516 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 183568
Aligned: 21 rows
Threshold Bit Score: 378.539
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
82700449    4 TTGPSVEGAPPFKRELLASLPSLRAFAVSLIGQHDRADDLVQDTIMKAWAKQESFEVGTNMKAWLFTILRNEFYTQMRKR 83 
163845242   4 TTGPSVEGTPPFKRELLASLPSLRAFAVSLIGQHDRADDLVQDTIMKAWAKQESFEVGTNMKAWLFTILRNEFYTQMRKR 83 
222086785   1 -----MEQQPSFKRELLAALPSLRAFAISLTGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKS 75 
227823002   1 -----MSENEEFKREMLAALPSLRAFAMSLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKR 75 
241205966   1 ---MEDKSQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKS 77 
209550600   1 ---MEDKAQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKS 77 
116253443   1 ---MEDKSQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKS 77 
86358872    1 ---MEEKLQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKS 77 
190893101   1 ---MEDKVQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAWLFTILRNELYSQMRKS 77 
15966188    1 ----MSSENQEFKREMLAALPSLRAFAMSLIGRHDRADDLVQDTIMKAWAKQDHFEIGTNMKAWLFTILRNELYSQMRKR 76 
82700449   84 GREVQDTDGMFSEQLAVHPSQYGTLDLQDFRAALDQLPDDQREAIILIGASGFAYEEAAEICGCAVGTIKSRVSRARARL 163
163845242  84 GREVQDTDGMFSEQLAVHPSQYGTLDLQDFRAALDQLPDDQREAIILIGASGFAYEEAAEICGCAVGTIKSRVSRARARL 163
222086785  76 GREVQDSDGLFTESMATHPSQYGALDLQDFRKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARQRL 155
227823002  76 GREIQDSDGHFTETLAHHPEQYGSLDLQDFRRALDQLPPDQREAIILVGASGFSYEEAATICGCALGTIKSRVNRARQRL 155
241205966  78 GREVQDSDGLFTESMAMHPSQYGALDLQDFKKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARQRL 157
209550600  78 GREIQDSDGLFTESMAMHPSQYGALDLQDFKKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARQRL 157
116253443  78 GREVQDSDGLFTESMAMHPSQYGALDLQDFKKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARQRL 157
86358872   78 GREVQDSDGLFTESMAMHPSQYGALDLQDFKKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARQRL 157
190893101  78 GREVQDSDGLFTESMAMHPSQYGALDLQDFKKALDQLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARQRL 157
15966188   77 GREVQDSDGHLTETLAHHPEQYGSLDLQDFRRALEQLPPDQREAIILVGASGFSYEEAATICGCALGTIKSRVNRARQRL 156
82700449  164 QEILQIEGEADYGPDADSSRATLRSFA 190
163845242 164 QEILQIEGEADYGPDADSSRATLRSFA 190
222086785 156 QEVLQISGEADFGPDATSAPLTSKAFA 182
227823002 156 QEILQVQGENDYGPDETSAPITSRAFV 182
241205966 158 QELLQISGEADFGPDATSAPLTSKAFA 184
209550600 158 QELLQISGEADFGPDATSAPLTSKAFA 184
116253443 158 QELLQISGEADFGPDATSAPLTSKAFA 184
86358872  158 QELLQISGEADFGPDATSAPLTSKAFA 184
190893101 158 QELLQISGEADFGPDATSAPLTSKAFA 184
15966188  157 QEILQVRGENDYGPDETSAPITSRAFV 183
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