Conserved Protein Domain Family
PRK12511

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PRK12511: PRK12511 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 237123
Aligned: 21 rows
Threshold Bit Score: 233.139
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
170750325   2 ASDKNKRPDLLDLLVPLRRYARSLTRDTLRADDLVHDTLVRALEMQGSLRPNTNLRTWMMTVLHNAFIDEQRRRQVEARH 81 
170742672   1 -MTSRKRLDVVDLIVPLRRYARALTRDPAQADDLVHDALVRALEHQSSLKSGTNLRTWLMTVLHNAFIDGQRRRQVEARY 79 
240137930   1 --MRSKRSEIVDLLVPLRRYARSLTRDSLKADDLVHDTMVRALESRANLRPDTNLRTWMMTVLHNVFIDEQRRKRVEARH 78 
163850805   1 --MRSKRSEIVDLLVPLRRYARSLTRDSLKADDLVHDTMVRALESRATLRPDTNLRTWMMTVLHNVFIDEQRRKRVEARH 78 
254560489   1 --MRSKRSEIVDLLVPLRRYARSLTRDSLKADDLVHDTMVRALESRANLRPDTNLRTWMMTVLHNVFIDEQRRKRVEARH 78 
218529625   1 --MRSKRSEIVDLLVPLRRYARSLTRDSLKADDLVHDTMVRALESRANLRPDTNLRTWMMTVLHNVFIDEQRRKRVEARH 78 
220924353   1 MMRPRKRLDVVDLIVPLRRYARALTRDATQADDLVHDALLRALEHQGALKSGTNLRTWLMTVLHNAFIDGQRRRQVEARY 80 
188580627   4 DRTRSKRSDIVDLLVPLRRYARSLTRDSLKADDLVHDTMVRALESRANLRSDTNLRTWMMTVLHNVFIDEQRRKRVEARH 83 
33601638    1 MTSDSPTFPVAAQLPALRAYARTLTRNPHDAEDLLQEALTRAYERRHTLRADGNLRAWLMAIVHNVFASEWRRRQAAPAQ 80 
146279686   1 ---MRETDEILAELTPLRRYARSLTRNEAEAEDLVQEALLRAHERRASFRRGKGLRVWLMSILHNSFIDGLRSRRARERR 77 
170750325  82 ADTLVRMTE-DMAPPAQEGQVRLAQIRQAFLKLPEEQRAALHLVTLEGMAYADAAAVLGIPIGTLMSRLGRGRAALRAFE 160
170742672  80 AETLEHIAD-AAVPAGQDSHVRLAQIREAFARLPEEQRAALHLVTIEGMAYQEAADVLGIPIGTLMSRLGRGRAALRSFE 158
240137930  79 ADVLVQLSD-DVAPPAQEGQVRLMQIRKAFEGLPEEQRAALHLVTLEGMAYADAAAVLGIPIGTLMSRLGRGRAALRAFE 157
163850805  79 ADVLVQLSD-DVAPPAQEGQVRLMQIRKAFEGLPEEQRAALHLVTLEGMAYADAAAVLGIPIGTLMSRLGRGRAALRAFE 157
254560489  79 ADVLVQLSD-DVAPPAQEGQVRLMQIRKAFEGLPEEQRAALHLVTLEGMAYADAAAVLGIPIGTLMSRLGRGRAALRAFE 157
218529625  79 ADVLVQLSD-DVAPPAQEGQVRLMQIRKAFEGLPEEQRAALHLVTLEGMAYADAAAVLGIPIGTLMSRLGRGRAALRAFE 157
220924353  81 ADTLEHLAD-EAVPPAQDSHVRLAQIREAFSRLPEEQRAALHLVTIEGMAYQEAADVLGIPIGTLMSRLGRGRAALRNFE 159
188580627  84 ADVLVQLSE-EVAPPAQEGQVRLMQIRKAFEDLPEEQRAALHLVTLEGMAYADAAAVLGIPIGTLMSRLGRGRAALRAFE 162
33601638   81 AAPLHDMEDaAAVAPPQEHSVRLAQIERAFMQLPDDQRAALHLVTIEGMAYQEAADALQIPIGTLMSRLGRARAALRRFE 160
146279686  78 EAAVMEAAP-ASHPASQESAVRLAQIRVAFAQLPEEQRAALHLVAIEGLSYNEAALVLGVPQGTLMSRIARARAALREFE 156
170750325 161 EGTrtdrgaddaetakAPetRrgppSTLRLVVSDEPRER 199
170742672 159 SGEnrlap---paappPPevS----PRLRVVQGGRPSVE 190
240137930 158 EGGrkgkatagssddgPDrgR----AHLRVVGGN----- 187
163850805 158 EGGrkgkatagssddgPDrgR----AHLRVVGGN----- 187
254560489 158 EGGrkgkatagssddgPDrgR----AHLRVVGGN----- 187
218529625 158 EGGrkgkanagssddgPDrgR----AHLRVVGGN----- 187
220924353 160 NGQgrlpsaepetprsP--------PRLRVVQGGSPSVE 190
188580627 163 EGGrkgkaaagstddgPErgR----SHLRVVGGN----- 192
33601638  161 DGMge----------aAAdrR----ARFRIVGGRDAA-- 183
146279686 157 DGTg------------AA--R----QPLRVVGGRDADDA 177
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