Conserved Protein Domain Family
PRK12427

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PRK12427: PRK12427 
FliA/WhiG family RNA polymerase sigma factor
Statistics
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PSSM-Id: 183523
Aligned: 15 rows
Threshold Bit Score: 376.894
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
51597620    1 MENREFEACLTLTAAEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEALRRYGHPDGQFAAYAVHRIRG 80 
45442811    1 MENREFEACLTLTAEEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEALRRYGHPDGQFAAYAVHRIRG 80 
162420360   1 MENREFEACLTLTAEEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEALRRYGHPDGQFAAYAVHRIRG 80 
157147079   1 --MMDFIASETLTPADEARYVSTYLPLVNKVVKQLAYQTSSVIDRDDMEQIALMGLLTSLRRYGHPDEQFAAYAIQRVRG 78 
170682912   7 FESEEFAAAPVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMGLLNAIRRYGLPDEGFAGYAVHRIRG 86 
170021344   6 FESEEFAAAPVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMGLLNAIRRYGLPDEGFAGYAVHRIRG 85 
218703543   6 FESEEFAAAPVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMGLLNAIRRYGLPDEGFAGYAVHRIRG 85 
218927931   1 MENREFEACLTLTAEEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEALRRYGHPDGQFAAYAVHRIRG 80 
260866428   1 --------------------MQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMGLLNAIRRYGLPDEGFAGYAVHRIRG 60 
260853482   6 FESEEFAAAPVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMGLLNAIRRYGLPDEGFAGYAVHRIRG 85 
51597620   81 SILDQLREHDWRPRRLRQKTHKTNEAIRQIAKRLGHEPNFEEISAELNLTADEYQEYLLLENAGAMESLDEILALDAHND 160
45442811   81 SILDQLREHDWRPRRLRQKTHKTNEAIRQIAKRLGHEPNFEEISAELNLTADEYQEYLLLENAGAMESLDEILALEAHND 160
162420360  81 SILDQLREHDWRPRRLRQKTHKTNEAIRQIAKRLGHEPNFEEISAELNLTADEYQEYLLLENAGAMESLDEILALEAHND 160
157147079  79 AVLDELRLLDWRPRRLRQKTHKLNDAIREIARQLGRTPSFEDISHHLSITAEEYQEYLLLDCAKTLESLDDLLGNDVYAG 158
170682912  87 AILDELRALDWRPRQLRQKYHQMKDLIRETRKKLGHEPEWSELAVE-GISHEDYLEYQQLEGAETLASLDELLNGEGPGI 165
170021344  86 AILDELRALDWRPRQLRQKYHQMKDLIRETRKKLGHEPEWSELAVE-GISHEDYLEYQQLEGAETLASLDELLNSEGPGI 164
218703543  86 AILDELRALDWRPRQLRQKYHQMKDLIRETRKKLGHEPEWSELAVE-GISHEDYLEYQQLEGAETLASLDELLNGEGPGI 164
218927931  81 SILDQLREHDWRPRRLRQKTHKTNEAIRQIAKRLGHEPNFEEISAELNLTADEYQEYLLLENAGAMESLDEILALEAHND 160
260866428  61 AILDELRALDWRPRQLRQKYHQMKDLIRETRKKLGHEPEWSELAVE-GISHEDYLEYQQLEGAETLASLDELLNGEGPGI 139
260853482  86 AILDELRALDWRPRQLRQKYHQMKDLIRETRKKLGHEPEWSELAVE-GISHEDYLEYQQLEGAETLASLDELLNGEGPGI 164
51597620  161 ILQSRDLEENIIIEDNLKQAISALDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKSFF 231
45442811  161 ILQSRDLEENIIIEDNLKQAISTLDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKSFF 231
162420360 161 ILQSRDLEENIIIEDNLKQAISTLDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKSFF 231
157147079 159 ALDSRPLEEEIIVSRTLRNALASLDEREQLILTLYYQHEMSLKEIALVLNLTEARVCQLNKIIAQKIQSFF 229
170682912 166 PLAGRELEDQFVTQQMLQHALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFV 236
170021344 165 PLAGRELEDQFVTQQMLQQALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFV 235
218703543 165 PLAGRELEDQFVTQQMLQYALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFV 235
218927931 161 ILQSRDLEENIIIEDNLKQAISTLDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKSFF 231
260866428 140 PLVGRELEDQFVTQQMLQQALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFV 210
260853482 165 PLVGRELEDQFVTQQMLQQALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFV 235
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