Conserved Protein Domain Family
PRK12366

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PRK12366: PRK12366 
replication factor A; Reviewed
Statistics
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PSSM-Id: 237078
Aligned: 16 rows
Threshold Bit Score: 518.834
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
288559372  21 QTIVEGWEKVQD--QMSKEEFITKFNEHKAEFkdASFFSDIDFLNMIVNPLVgggDDEPGPAIVEGEFQKISDVEPGNEG 98 
15669348    6 ERFKQLKKKVAEalNISEEELDRMIDKKIEEN--GGIILKDAALMMIAKEHG---V---YGEEKNDEEFLISDIEEGQIG 77 
150400778   1 MNIDKIKQKILE--KISEEELAKEIDSIIQEH--GGLIGEDAAINTIARDIG---INIEEEYDEEECKFLIKDISEGQSN 73 
148643392   3 NEILELYEQVKD--KLTIEEFQAKINDISKENedLGFVDDYYAAEQVVNNII---GASEDDQKSNGEILNIGDLEQGPQ- 76 
150399109   1 MNIEKLKQKILT--KLSKKELEKRVNEKIEEN--SGLLGEESAVMLVAQEFG---IEITYD-DDEEYDFSIKDIQDGQKN 72 
256810698  20 EKFKKLKKKVAEalNISEEELDEMIKEKIKEF--GGILLKDAALMMIAKEHG---VDID---KKEVEEFLIKDIEEGQIN 91 
261403319   8 EQFKDLKRKIAEelNISEDELDKLIEKKIEES--GGIILKDAALMMIANEKG---L---LKKEDKSEKFQIKDIKEGQIG 79 
289192269  10 ERFKKLKKKVAEalNISEEELDRMIDKKIEEN--GGIILKDAALMMIAKEHG---I---YGEEKDDEEFLISDIEEGQIS 81 
296109213   1 MNYEYVKKILSKklNLTEDEIEERVKGLINEY--GGIITKEAAILMLAKEEG---IDIE---EEPEEEFKIKDLEDGMI- 71 
297619538   1 MNIEKLKNSILQ--KMSQEELDSKISQKIDDA--SGLIDEKGALMLVAQELK---IDIPYE-EDEDFDYKISDILEGQRD 72 
288559372  99 FNVVARIMSIGNSRIFTSRKGKQGKLCNLQIADDTGELRLVLWTENIKHLKHVTEGDIVEITNIECKEgfrggkefslrp 178
15669348   78 VEITGVITDISEIKTFKRRDGSLGKYKRITIADKSGTIRMTLWDDLAEL--DVKVGDVIKIERARARK------------ 143
150400778  74 VEITAKIIDMTDLREFNKKDGTTGTVRSIVIADNTGSIRLTLWNDKANIVDNLEIRDVIEITGAFSRQ------------ 141
148643392  77 AAIVGRIMGISNPKSFKTRKGKSGQVCNMELKDSTGDIRVVLWTENIKLLKNFKEGNIVKITDVDIKEgfrgdneanlrp 156
150399109  73 VEVSGKIIEVSNTKEFSKKDGSTGKLASITIGDNTGTTRLTLWNDKTELIEGLKKGDVIKIENAFSRK------------ 140
256810698  92 VEITGVVTDVSDVKTFKRKDGSEGKYRRIVIADKSGTIAMTLWDDLAEM--DINIGDILKITRARARK------------ 157
261403319  80 VEIVGVVVETSDLKTFTRKDGSVGKYKRIRVADASGAIRITLWDDLAET--EVEKGDVIKVERARARK------------ 145
289192269  82 VEITGVVTDVSDIKTFKRRDGSLGKYRRITIADKSGTIRMTLWDDLAEL--DVKVGDVIKIERARARK------------ 147
296109213  72 VSIKGKVYDVRESSTESQR------VINLVIGDETGYVPVTLWNINIEL----EEGDIIELKKVRVKR------------ 129
297619538  73 VEITGRIIEISNIKEFNKKDGSTGKLASLRIADNSGAIRLTLWNDKADLIIGLKKGDVIKIENAFARN------------ 140
288559372 179 rsslrpieegsenypeniaafpvyeekitqiadikpdetvsiigrlirvpkphayesngkkgkvtsleiqdasgktsytl 258
15669348      --------------------------------------------------------------------------------    
150400778     --------------------------------------------------------------------------------    
148643392 157 rstithfkeadlskfpeyeekitdiedlvpe------tkaniiarivriptprtyekngkegkvtslelkdatgeisytl 230
150399109     --------------------------------------------------------------------------------    
256810698     --------------------------------------------------------------------------------    
261403319     --------------------------------------------------------------------------------    
289192269     --------------------------------------------------------------------------------    
296109213     --------------------------------------------------------------------------------    
297619538     --------------------------------------------------------------------------------    
288559372 259 WNNDVKLidilelkegdivkilNEQSRERNGEISlsHW-DGRIVKAEGDYDIPEYEENIikiadaqemqDVSIIGLVTKV 337
15669348  144 WRNNLEL---------------SSTSETKIKKLE--NY-EGELPEIKDTYNIGELSPGM----------TATFEGEVISA 195
150400778 142 WNNRIEL---------------NSGSDTKIEKIEigDYdESMYPIVKDYYKIGELQANN----------PATIKGEITIC 196
148643392 231 WNKNVDLidelgldagdsvkilGAQVRERNGELSltHWdG---RIIKGDFDVPEFTQEFikigditeqnNIAIKGVISKL 307
150399109 141 WNDKVEL---------------NSGSELSIEKLK--KYdESRYPILKENYSISELLPNL----------LAKINAEVILA 193
256810698 158 WGNRLEL---------------SSTSETNIKKLE--KY-EGELPEIKEIYDIGELSPGM----------TATFEGEVISA 209
261403319 146 WKNNIEL---------------SSTSETKIKKLE---NhEEELPEIKDKYKIEELIPGT----------NAVIEGEVISV 197
289192269 148 WRNNLEL---------------SSTSETKIEKLE--NY-EGELPEIKDIYDIGELNPGM----------TATFEGEVISA 199
296109213 130 -KKRLSL---------------VSTDETEVIKLG---------KEEVETKKIKDLNIGD----------FAIIEGSVFSS 174
297619538 141 WNNKMEL---------------NSGSELSIEKLD--EFdESNYPKIKENYNISELVENL----------PASIEATVKLA 193
288559372 338 QDVIQFTRN-DGSEGFVKSIELSDDEGSIRVTLWGDDTKIPISKGDIVKVIGgnieyddF-SNGYrvnTNWNTELkinpe 415
15669348  196 LPIKEFKRA-DGSIGKLKSFIVRDETGSIRVTLWDNLTDIDVGRGDYVRVRG-------YiREGYy--GGLECTA----- 260
150400778 197 YAVREFPKR-NGETGRVKSFILKDETGTIRGTLWDDNTEINLNKGDIVEVKG-------MvKEGFr--EGLDINV----- 261
148643392 308 QDIRTFTRKsDGSEGKLRNFDVSDDTGSIRTTIWGNDTDILLTKGDIVKIIGadarfddYtDSGYslnTNFNTQLsinpe 387
150399109 194 YPKKEFSKK-DGTTGQLKSLTLKDSTGSIRVTLWNELADFEVKKGDYVEVKG-------YaKQGY---SGLELSA----- 257
256810698 210 LPIKEFKKS-DGSLGRLKSFIVKDETGSIRVTLWDELTEIDVNKGDYVRVRG-------YiREGYy--GGLECTA----- 274
261403319 198 FPIKEFKKS-DGSFGKLKSITVKDDSGTVRITLWDDLAETEVEKGDIVRVEG-------YvKEGYy--GGVECSA----- 262
289192269 200 LPIKEFKRA-DGSVGKLKSFIVKDETGSIRVTLWDNLTDIDVGRGDYVRVKG-------YiRDGYy--GGLECTA----- 264
296109213 175 LPIKRFEK------GKFRSFILSDGEDSIRVVLWHDLADTEIRVGDLVRVKG-------WiVPNYynpNQLECSA----- 236
297619538 194 YPLKEFNKK-DGSTGFLKSLILEDETGTIRATLWNDLAKMDVNAFDKVLING-------FvKQGY---SGLEISI----- 257
288559372 416 E----HSDLIETLKGQAENL--GPIPISEVQSIeeDGEEVDIIGRIITLNDTHTFPRDDGTeGVVRSGEMADGSspdGLV 489
15669348  261 N----YVEILKKGEKIES----EEVNIEDLTKYe-DGELVSVKGRVIAISNKKSVDLDGEI-AKVQDIILDNGT---GRV 327
150400778 262 N----NIKIIGKAEVEEIEA--KDETIENLPNC--NGEIVNVKGRIINISNPKTVNFGDRD-VEVQEITITDST---GTI 329
148643392 388 NlsaeELDIFD--EIKQKVS--QIKRLSEVEEFdeDGIEVDVIGRMFAIGEINEFQRDDGSvGYARSAKFSDGE---GRV 460
150399109 258 D----NITIIREGQLEESLS--ENLKISELTDF--KGEFVNVSGNILTISPSREVSFNDRT-SEVQDLYISDDT---GRV 325
256810698 275 S----SVEILKKGEKIES----EEVNVEDLPKHe-DGELVTVRGRVVAISSKRSVNLDGDI-AKVQEVLLDNGT---GRV 341
261403319 263 N----NIEILEKGERKDV----DEVDIEKLSEYn-DGDMVDVKGRVIAISNKKRVNLGGRE-AEVQDIILQNGT---GKV 329
289192269 265 N----YVEILKKGEKKEA----EEVNIEDLTEY--EDELVSVKGRVIAISSKKSVDLDGEI-ARVQDIILDNGT---GRV 330
296109213 237 T----NIEILE---RADGEI--EVVPIEDLKYRd-EGERVSIRGKVLAKSLKRTVEL-EKP-IKVQDLIVEDET---GRV 301
297619538 258 N----TIETTEKADSSETKEvdNVISIEDLIHY--DKELVSVKGKVLNKSIVREVEFPDRV-AKVQEIKVSDGT---GNV 327
288559372 490 RVSFWDDKAKVPEI-----GKAYKVENARTR------MGMYAVEVNVGKTTRFIEipESEAgdl--psFEELEESIYISK 556
15669348  328 RVSFWRGKTALLENik--eGDLVRITNCRVKtfy-drEGNKRTDLVATLETEVIK--DENIe------APEYELKYCKIE 396
150400778 330 GVAFWGNAMNKIKEasikeGDGVKITNCKVKtye-nyEGKIIASLSAQYGTEIIK--DETVg------APEYSENIIKIK 400
148643392 461 GLTFWDQKAKQEyk----tGGAYKIENAKVR------LGMYEVELNIGGSARIMElpEDSDqarflpsFKTIETMLYSHK 530
150399109 326 KIAFWGLNKDVLKEln--nGDYVKISNCKLRnyn-dnSGEKRADLTYSYLSELKK--DKKL-------SKEIEEIVTPIS 393
256810698 342 RVSFWRGKTALLENik--eGDLVRITNCRVKtyy-drEGNKKADLVATAETEVIK--DESIe------APEYEINYCKIE 410
261403319 330 RVSFWGDKTSLLDNir--eGDAVKIKNCRIKtyy-drEGNKKVDLVATFGTEVIK--DKNIe------VPEYKLDYCKIG 398
289192269 331 RISFWRGKTALLENik--eGDLVRITNCRVKtfy-drEGNKRADLVATVETEIIK--DESIe------APEYELKYCKIE 399
296109213 302 KITFWGMGCSHLDNvs--eGDIVLIKNCKVKkyv-gmDGEEVISLNAGIDSEVII--EKKG-----------EVKFNKIK 365
297619538 328 RAVFWGNNIVKLDGid--eGDEISLINCKTKkymnrmTDSEVVDLTFTFASSLNL--IEKSk------TEIKLNSVSDLV 397
288559372 557 KIE-ELDEDDMNIKVLARILEVHEPREFPRDDGTKGLVGNMEVADITGSIRVTLWDDKNNLPYGVGDAIKIQNPRVRYNS 635
15669348  397 DIY-NRDVDWNDINLIAQVVEDYGVNEIE-FEDKVRKVRNLLLEDGTGRIRLSLWDDLAEIEIKEGDIVEILHAYAKERG 474
150400778 401 DIFsLDEEKRNDISVIGKVSDLYDLRTFERRNGSTGKVRSLMLEDETGKIRLTLWDSDAELEIKEGDVIKVVRGYVKENG 480
148643392 531 SIA-DVEEDDEGIIVTGRIIESSDVREFDRTDGSKGYVKSLEIADNSGSINVTLWNENAKKEWNVGDAIKFQDPQISFRN 609
150399109 394 EIL-SGKANKNDVTVVGMVVSAYPINEFKRSNGSTGKVKNITIDDNSGSIRMSLWDNYAEMAILEGDILKIVHGYVKESG 472
256810698 411 DIY-NREVDWNDINLIAQVVEDYGINEIE-FDDNIRKVRNLMLEDGTGRIRLSLWDDLAEMDIKEGDIVEVLHAYAKERG 488
261403319 399 DIY-KRNVDWDDINLIARVLEDYGINELE-IDGKIRKVRNLMLDDGSGTIRLTLWDDLAEMDIKEGDILEINHAYVKEKG 476
289192269 400 DIY-NRDVDWNDINLIAQVVEDYGVNEIE-FEDRVRKVRNLLLEDGTGRIRLSLWDDLAELDVKEGDIVEILHAYAKERG 477
296109213 366 EIL----EENLDIANVFGVVTDVKDNIVE-VDGVKKRVKNVIIDDGT-PIRLTLWEEAANIELEEGDVIKVYNASVKKNE 439
297619538 398 EKFeNKELDADDVSFGAKVYSSYPAKEFSRYDGSKGLVKSIELSDGDKTVRMTLWDDNTNLEITEGDTLKVLHAKIKENN 477
288559372 636 nmDYLELSVGNGTNILTPSDSEIndIPDilelqntlyQTKEIANLSDDDTkIRVTGRFVDIYGQKMIIPKCPQCNNTLEp 715
15669348  475 --DYIDLVIGKYGRIIINPEGVE--IKT---------NRKFIADIEDGET-VEVRGAVVKILSDTLFLYLCPNCRKRVV- 539
150400778 481 --DYYDLNIGRIGKLIINPEGISvdIKT---------SRKFIKELQEEDT-TEIRGAVVDYRKQNLVLYLCPNCNKRVA- 547
148643392 610 --DSLEINVSRSTSILEPDESEIddLPTydelkesiyVPKTIEALEDDDRnVRITGTLKEVFGNKILITKCPSCGNTVD- 686
150399109 473 --EYMDLSVGRFGQILVNPKGIS--VKS---------NRSFIVDIEEGKS-TEIRGTVVDFRKQDLILNLCPNCRKKLN- 537
256810698 489 --DYIDLAVGRYGRIIVNPEGVE--IKS---------NRKFIADVEDGET-VEVRGAVVKILSDSLFLYLCPNCKKRVV- 553
261403319 477 --DYIDLVLGKYAKITINPQGVE--IKT---------KRKFIADIEDNET-VEVRGAIVKILSEGVFLYLCPHCRRKIE- 541
289192269 478 --DYIDLVIGKYGRIIINPEGVE--IKS---------NRKFIADIEDGET-VEIRGAVVKILSDTLFLYLCPNCRKKVV- 542
296109213 440 ------LVLTRYGRIEkvr----------------fyNKKFIIELIEDEL-SEVRGTIVKKEEDEI--ELCPICRRRVI- 493
297619538 478 --GYYDINTNKYTNIEINPKDLN--LVS---------VRKHIVDINEESK-VELQATVVDYRKQDLILNLCPTCRKRLS- 542
288559372 716 EDI---DAEECSFCGNYidEPKYLLMLPGKLEDDTGDIQVTFFNELVGELLGMKQDEIFELYEgeggdlgpleGKIDD-L 791
15669348  540 EID---GIYNCPICGDV--EPEEILRLNFVVDDGTGTLLCRAYDRRVEKMLKMNREELKNLTI----------EMVEDeI 604
150400778 548 LVE---GVYDCEECGEV--SPKELITATITVDDGTSNISCKLYGSAVAKLTNTPLNELKDANL----------DILEN-I 611
148643392 687 QSS---DDFVCSFCGEPidEPRYLLMVPARLEDDTGEISITFFDNLAEELLDMKKEEIINLTDngsdl-gpmeGRIDD-L 761
150399109 538 ASG---KEYVCETCGTV--TPNELLVSTVAIDDGTSVINCRIYGQNVEKITGMSKNELKSSNL----------DALSK-I 601
256810698 554 EID---GVYNCPICGDV--EPDEILRLNFVLDDGTGTLLCRTYDKRVERMLKMNREELKNLNM----------EMVEDeI 618
261403319 542 --E---GENICPNCGEI--VPDEIIRLNFVVDDGTGTLICRVYDKKVERMLKMSKEELKNIPF----------EMIESeL 604
289192269 543 EID---GIYNCPICGDV--EPEEVLRLNFVVDDGTGTLLCRAYDRRVEKMLKMGREELKNLTI----------EMVEDeI 607
296109213 494 NGE-------CPNCGIV--EAEKVKLLRVMLDDGTGVLECRAYGKRAEKLNR---------------------------E 537
297619538 543 VVDsnsGVGVCETCGEV--EPNEVLTATIVLDDGTGTINARVYDANISKLTGLSIDELKEKNI----------EALNL-A 609
288559372 792 EGITLEILADVTFNeyDEENRLRPRKIFNMEW 823
15669348  605 LGEEFVLYGNVRVE--NDELIMVVRRVNDVDV 634
150400778 612 LGSEFVFSGLAKTG--YNDLEFSVRNVKSVDL 641
148643392 762 NGLTVEVITNVSFDdyNEEIRLNPKRILSKYY 793
150399109 602 LGRDFIFYGSPNIR--NDELEFSVKSVSNIDI 631
256810698 619 LGEEFVLYGNVREE--NDELIMVVRRVSDVDV 648
261403319 605 LGEEFVFYGNVRKE--EEDLIMIVKRVEDVDV 634
289192269 608 LGEEFVLYGNVRVE--NDELIMVVRRVSDVDV 637
296109213 538 LGDEIVIYGILKNK------IFNVKAIKRFDI 563
297619538 610 IGNEYVFYGNVVMR--NDDYEMNIRGIQEFDI 639
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