Conserved Protein Domain Family
PRK11924

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PRK11924: PRK11924 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 183384
Aligned: 31 rows
Threshold Bit Score: 138.565
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
103488180   1 MAHPPQRHSIASSIDPAFVARVRGDLLRFARLQLGSDDEAEDAVQEALAAALRNGDQFR-GEAALKTWMIAILKNKIADL 79 
17549070    1 ---MQQACLPATEVASDWFRQHYAWLAGRMGRKTGCRFGAEDLASEAFAQLLQMPDWQG--TREPRALLTTIAQRLLYDI 75 
50120213    1 ---MYTEAVKKPDLLSLIFRSDYRWLTDKLRRRIAYGCEAEDVASEAFLRLASLPNLAN--VQEPRAMLTTLAKRVLYEN 75 
59713949   30 SWLRKVGETQDKVAFAELFKWFAPKIKMYGLKRFNDQSLAMDLVQETMTLVWRKATLFNrSKGNASGWIFTIMRNHSFDM 109
56460499   27 ELLAKIAENRNRAAFSELFRLFAPKLQSYATRQFGNEQTAMDLVQETMTNVWHKAHLFKpDRGSPSTWIFTIARNIRFDL 106
119944753  31 LWLKLVATKQDKEAFSELFKWFAPRIRAHGMQRFKQEALAMDLVQETMLLVWRKAVLFNvDKGKASTWIYTIMRNYCFDM 110
197337078  30 SWLRKVGETQDKVAFAELFKWFAPKIKMYGLKRFNDPSLAMDLVQETMTLVWRKATLFNrSKGNASGWIFTIMRNHSFDM 109
253687545   1 ---MYTEAVKKPDLLSLIFRSDYRWLTEKLRRRIAYGCEAEDVASEAFLRLASLPNLAN--VQEPRAMLTTLAKRVLYEN 75 
300693795   1 ---MPQACLPATEVASDWFRQHYAWLAGRMGRKTGCRFGAEDLASEAFAQLLQMPDWQG--AREPRALLTTIAQRLLYDI 75 
300697450   1 ---MPQACLLATDVASDWFRQHYAWLAGRMGRKTGCRFGAEDLASEAFAQLLQMPDWQG--VREPRALLTTIAQRLLYDI 75 
103488180  80 LRQRRRRPLGASQMAAEEEDGgtlpalfdergmwreaarpaAWENPEAGLHSDQFLAIFDACLNRLPAQQGQVFMMREVV 159
17549070   76 WRRRDLELAYQAWAAAQPEA---------------------TLPSPEERALVLEALATIDRLLDGLPVKARTAFLYSQLD 134
50120213   76 WRRRDLEKAYLTALASKPEF---------------------HHPSPEEQQLLMEALLTIDQALDGLSTKARQAFLFSQLD 134
59713949  110 LRKIQTNKEDTISEDLWPL----------------------YDKQVETNSVDFLENKNLEKALMLLPLPQRIVIEGLYVQ 167
56460499  107 LRKNKKRKDDISADELWPILSeq-----------------nDSLDDGYALDHDVLMQEISFYYAQLPDAQRVVIEKIYIE 169
119944753 111 LRKKQTQKEDTISDDLWPV----------------------IEQQVPDDKDDHLQNRLLLSHLGSLPLEQKQVVEAIYLQ 168
197337078 110 LRKIQTNKEDTISEDLWPL----------------------YDKQVETNSVDFLENKNLEKALMLLPLPQRIVIEGLYVQ 167
253687545  76 WRRRDLEKAYLTALASKPEF---------------------HHPSPEEQQLLMEALLTIDQALDGLSIKARQAFLFSQLD 134
300693795  76 WRRRDLELAYQVWAAAQPEA---------------------TLPSPEERALVLEALATIDRLLDGLPVKARTAFLYSQLD 134
300697450  76 WRRRDLELAYQAWAAAQPEA---------------------TLPSPEERALVLEALATIDRLLDGLPVKARTAFLYSQLD 134
103488180 160 ELATDEICDELGLTSGNIHVILHRARLALRACLQHHWFA 198
17549070  135 GLTYPEIAGRLNVSVRMVQKYMTQAMRLCYLAGVS---- 169
50120213  135 GMTYADIAVQLDVSASMVRKYIAKALTNCYLATQDSSDL 173
59713949  168 GLTQQELSEQLAEPIGTIKSRLRLALTKLRQEYEHE--- 203
56460499  170 GKSQQEVSDALGVPLGTIKSRTRLALKKLKELIVDDD-- 206
119944753 169 EMTQQELATHLDLPLGTVKSRLRLAISKLKSKLEADLD- 206
197337078 168 GLTQQELSEQLAEPIGTIKSRLRLALTKLRQEYEHE--- 203
253687545 135 GMTYADIAVQLDVSVSMVRKYIAKALTNCYLATQDSSDL 173
300693795 135 GLTYPEIAERLNVSVRMVQKYMTQAMRLCYLAGVS---- 169
300697450 135 GLTYPEIAERLNVSVRMVQKYMTQAMRLCYLAGVS---- 169
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