Conserved Protein Domain Family
PRK11922

?
PRK11922: PRK11922 
RNA polymerase sigma factor; Provisional
Statistics
?
PSSM-Id: 237024
Aligned: 40 rows
Threshold Bit Score: 255.274
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
89902892    6 TMLPAPLDVSSDAELVDLAIAGHDAAFSQIMRRHNRLLFRTARGILKND-DDTQDALQEAYLRAWRALASFRSDARLSTW 84 
94968814    6 VLDKTRLSEWSDQEIIERVLAGDSPAYELLMRRYNQRLYRLIRSVLRDD-AEAEDVMQEAYLRAFRNLSQYEGRSTFSTW 84 
86156894    7 SVRGVPARAPSDSDVVARVLEGDVALFEVLMRRHNPRLYRAIRSVLRNE-AEVEDAMQQAYLQAYAHLGDFQGHAAFSTW 85 
110633596  11 AHPKLDLERLSDEELVHLARQGGESAIRLLIKRNNRSLFRVARAVVRDD-AEAEDIVQETYVSAFTKLDSFRGHSRFSTW 89 
153003363   7 SARGFQAGGAPDEAVVHRVLAGDTASFELLMRRHNQRVYRTIRAVLRRDsADVEDAMQQTYLHAYRALAAFEGASSFGTW 86 
190894949   9 TRHRPLLSALADADLLPLAKIGDEVAIRAIIQRHNQRLFRTARAVIRND-AEAEDVVQASYIKAFASLSAFRGEAELSTW 87 
197120916   7 RTRVVPTLAPADDEVVARVLDGDAALFEVLMRRHNPRLYRAIRSVLRDE-AEVEDAMQQAYLQAYAHLGDFQGQAAFPTW 85 
209546937   9 ARHQLLLSALADADLVPLAKMGDEPAIRAIVKRHNQRLFRTARAVIRND-AEAEDVVQAAYIKAFTNLATFRGEAELSTW 87 
220915613   7 RTRVVPTLAPADDEVVARVLEGDVALFEVLMRRHNPRLYRAIRSVLRDE-AEVEDAMQQAYLQAYAHLGDFQGQAAFSTW 85 
241113145   9 ERHRQQMSILSDTDLVLLAKAGDELAIRAIVQRHNQRLFRTARAVIRND-AEAEDIVQAAYIKAFTSLATFRGEAQLSTW 87 
89902892   85 LVRIVVNEALGRLRRSGVQPAQVLPLNAAIDpdgetpemqMQANPDDQPEPTAVRAQIRQQIEARIDSLPDSFRSVFMLR 164
94968814   85 IGHIAVNEALARLSKASRLEYKDLNDPAATP---------DIADVAPTPEAQSASGETQRLLERAIMTLPLRYRSVLMMH 155
86156894   86 LVRIGVNEALMRLRGRERLVPLLDEREDGGIgr------eEERVADPSPEDAAAAREARVLLEQAVDRLPLHLRTVYVLR 159
110633596  90 LTRIALNEALGRARKRWPAAELAELDMAEGCnggs-vimfPTSLKPPGADAELARKQVRDLLETAVDELPDPFRLVFILR 168
153003363  87 LTRIALNVALGFVRRQRVAGVELSVEVDEM----------TRGARDEGPEDGAARSEAAALLERAVAQLRDEHRIVFVLR 156
190894949  88 LTRITLNEALGRVRAQKNTTGLEEIDMQATSaggq-vvqfPSSLSATDPETELSRSQARQLLEQAVDELPDDFRAIFVLR 166
197120916  86 LVRIGVNEALMRLRGRGRLVLAAEPPEGGSVg-------eEEHVADPSPEDQAATHEARALLEQAVDRLPLHLRTVYVLR 158
209546937  88 LTRITLNEALGRMRTRKNTTGLDEIDMQATSagge-vvqfPSSLSATDPETELSRSQARQLLEQAVDELPDDFRAIFVLR 166
220915613  86 LVRIGVNEALMRLRGRGRLVLAAEPPEGGRVg-------eEEHVADPSPEDQAATHEARALLEQAVDRLPLHLRTVYVLR 158
241113145  88 LTRITLNEALSRVRARRNTTGLEEIDMQTTApgge-vlqfPSSLSATDPETELSRSQARHLLENAVDELPDDFRAVFVLR 166
89902892  165 GVEELSVEETALALDIPEATVRSRFFRARGILREGLSRDIDMAIGDAFSFAGPRCDRIVEGVLARIAHER 234
94968814  156 DVEDMTTADTAAMLELTEATVRVRLHRARALVRRKLFALVGATSTSAFQIQAPRCDRVVANVLRRIAE-- 223
86156894  160 EIEQLSTAEVAAALDLGEEAVKVRLHRARLALRGLIAERVGQGAPEAFGFLAPRCDRVVAAVLAAIAARS 229
110633596 169 DVEEMSIEETAHQLSLKPETVKTRLHRARRLMRLAVEKQLAGTFSELFPFDGARCERMADRVIDRLHGLE 238
153003363 157 EVEQLSTAETAEALELSEENVKVRLHRARLALREILAGEVGQSAPQAFAFLAPRCDRVVHSVLSSIGARP 226
190894949 167 DVEGMSTDEAASYLGIRPETAKTRLHRARKMMRQSIEKRLSGAFSALFPFDGARCAFMADRVVAALRQTS 236
197120916 159 EIEQLSTAEVAAALELGEEAVKVRLHRARLALRELIAERVGQSAPEAFGFLAPRCDRVVAAVLAAIPARR 228
209546937 167 DVEGMSTDEAASYLGIRPETAKTRLHRARKMMRQSIEKRLSGAFSALFPFDGARCAFMADRVVAALSEPS 236
220915613 159 EIEQLSTAEVAAALELGEEAVKVRLHRARLALRELIAARVGQSAPKAFGFLAPRCDRVVAAVLAAIPARR 228
241113145 167 DIEGMSTEEAASYLGIRPETAKTRLHRARRMMRQSIEKQLSGAFSALFPFDGVRCAFMADRVIAALGNEM 236
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap