Conserved Protein Domain Family
PRK09646

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PRK09646: PRK09646 
ECF RNA polymerase sigma factor SigK
Statistics
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PSSM-Id: 182015
Aligned: 33 rows
Threshold Bit Score: 266.921
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
170781002   7 SSIERPHLPGPADPESKEALLGRVAQGDRRAFSELYDQLAPRVLGLVRRLLVDHAQSEEVTQEIFLEIWQSASRFDPAKG 86 
148273694   3 SSIERPDLPGPADPESKESLLGRVAQGDRRAFSELYDQLAPRVLGLVRRLLVDHAQSEEVTQEIFLEIWQSASRFDPAKG 82 
119718754   7 VGAGAPSPEDGAPGADLVELLRRSARGDEQAFARLYDATGSRVHGLALRVVRDPAQAEEVTQEAFLEIWRTATRFDPDRG 86 
158315989  10 ALRALPGTGDGVCGPTPETLLARTGRGDTDAFGALYDQLAARVYGLVRRVVRDPAQAEEVTQEVFVGVWQEAPRFDPARG 89 
111223042  14 VRGGQDVPRGVPPAPTLEALLIGVARGDRDGFAALYDRLAPLVFGLARRVLRDPAQAEEVAQEVFVAVWRDACRFDPDRG 93 
21220217    1 ---------MAGDRVAADELLVLVADGDQQAFEELYGLVSGPVFGLVRRVVRDPAQSEEVAQEVLLELWRSAARFDPRRG 71 
21219164    1 MKEAVHIGRNPSSQPDLQQLIREVALGDQDSFAAVYDAVAGSVLGVVRAVLRDQAQSEEVAQEVLVEVWRTAPRYRPERG 80 
290955645   9 VKEAVHIGRNPSTEPDLQDLVAQVALGDEDAFTHVYDTVAGPVLGVVRAVLRDHAQSEEVAQEVLVEVWRTAPRYRPDRG 88 
290961588   1 --------------MEADRLLVRVAGGDQRAFEDLYAVVSGPVFGLVRRVVRDPAQSEEVAQEVLLELWRSAGRFDPARG 66 
29833124    1 ------------MLVHADELLVLVAEGDQRAFEELYGLVSGPVFGLVRRVVRDPAQSEEVAQEVLLELWRSAARFDPGRG 68 
170781002  87 AATTWVLTMAHRRAVDRVRASQSSRDRDVRIGIRDHEHGYDQVSETVEISIEHERVTKAMTKLTEIQRQAVSLAYYGGYS 166
148273694  83 AATTWVLTMAHRRAVDRVRASQSSRDRDVRIGIRDHENGYDQVSETVEISIEHERVKKAMTKLTEIQRQAVSLAYYGGYS 162
119718754  87 SPLAWLLTITHRKAVDRVRSAQAATRRDTTYHEQNQPVEHDETAEAAHASLEAHRVRGALAALTEVQREAVGLAYFGGYT 166
158315989  90 SVTGWVSTMAHRRAVDRVRSVEAQRARDVRVAARSTARPHDQVAEQVETRLEHERIRGCLGDLTATQRESITLAYYSGYT 169
111223042  94 SVTGWVSTMTHRRAVDRVRSVEAEKAREHRAAGMYAARAHDQVAEQVELHLEHERVRGCLDSLTPRQRESITLAYYSGFT 173
21220217   72 SALSWILTVAHRRAVDRVRSARAAGERDRREAHRSHHPAFDQVSEEVEAELEREWVRGCLDRLTALQRQSVTLAYYDGYT 151
21219164   81 TVINWVLTLAHRRAVDRVRSVEAAAARDHRAALLDRTPEYDEVTEQVETRLEREQVRRCLRTLTDIQRQSVSLAYYRGLT 160
290955645  89 TAVNWILTLAHRRAVDRVRSVEAAVVRDHKAALLERTPEFDDVTEQVEARLEREQVRRCLRTLTEIQRQAVTLAYYRGLT 168
290961588  67 SALSWILTLAHRRAVDRVRSARAATEREQREGRRNHHPAFDQVAEEVEAGLERQWVRHCLDKLTTLQRESVTLAYYDGYT 146
29833124   69 SALSWILTLAHRRAVDRVRSARAAGEREQREALRAHHPAFDQVAEEVEAGLEREWVRRCLDRLTALQRQSVTLAYYDGYT 148
170781002 167 HSEVASMLDVPIGTVKTRLRDGMIRLRDEMGVAS 200
148273694 163 HSEVASMLDVPIGTVKTRLRDGMIRLRDEMGVAS 196
119718754 167 HTEVATMLDLPVGTAKTRIRDGLIRLRDAMGVGS 200
158315989 170 YREVAELLELPVGTVKTRMRDGLSRLSDCMGGRS 203
111223042 174 YREVAELLTVPVGTVKTRMRDGLSRLSDCLGMDS 207
21220217  152 YREVAERLSLPLGTVKTRMRDGLGRLRECLGGVA 185
21219164  161 YRQVAEALALPLGTVKTRLRDGLIRLRDCLGVSA 194
290955645 169 YRQAAEALSLPLGTVKTRLRDGLIRLRDCLGVTA 202
290961588 147 YREVAERLSCPLGTVKTRMRDGLTRLRECLGGVA 180
29833124  149 YREVAERLSLPLGTVKTRMRDGLTRLRNCLGGAA 182
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