Conserved Protein Domain Family
PRK09643

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PRK09643: PRK09643 
RNA polymerase sigma factor SigM; Reviewed
Statistics
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PSSM-Id: 236604
Aligned: 28 rows
Threshold Bit Score: 258.486
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
54027634   10 DSRGGssrpvtarersfalhELSDVELLQAHAAGRGHAFAELLRRHNDHLWQTALRTSYTREDAADSLQDALLSAHRTAG 89 
226362877   6 GDSEG---------------EPSDVDLLAAHVAGDRHAFETLLGRHYDHLWHVAKRTSYTTEDAADALQEALLSAHRNAG 70 
111020634   6 GDSEG---------------EPSDVDLLAAHVAGDRHAFETLLARHYDHLWHVAKRTSYTTEDAADALQEALLSAHRNAG 70 
226309501   6 GGTGGgagnfesrsfenknlEPTDFELLTAHVAGDRHAFRELLVRHQDHLWHVARRTSYSDEDAADALQEGLLSAHRKAA 85 
119718902   6 AGPGD---------------QATDQDLLRAHVDGDPDAFGLLFARHRDRLWAVAVRTMGNREDAADGLQDGLVAAYRRAG 70 
21222299    4 GASHD---------------GVSDQELLARHVEGDPDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALVSAYRAAH 68 
290959017   4 SADHS---------------DVSDQDLLARHVAGDPDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALVSAYRAAH 68 
182437480   3 SVPPE---------------APSDSDLLAQHVAGDPDAFGELVHRHRDRLWAVALRTLGDREEAADAVQDALVNAFRAAH 67 
29830846    4 EAAYG---------------TASDQDLLSRHVAGDPEAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALVSAYRAAH 68 
297563770   1 MDAVQ---------------ELPDRELLTRHAQGDDQAFAVLVRRHRERLWAVAVRMMGDREEASDALQDAFLSAFRAAD 65 
54027634   90 TFRAEAEVRSWLHAIVVNACLDRIRRNKTRRAVSFaPESLPE----Rte--------erDAFAELEMSLVVDRALFSLPP 157
226362877  71 SFRRDAAVRSWLHTIVVNACLDRIRRNKARPAVSLsADEDDE----Prd--------trDYVSEVELSLVVERALAQLPP 138
111020634  71 SFRRDAAVRSWLHTIVVNACLDRIRRNKARPAVSLsADEDDE----Prd--------arDYVSEVELSLVVERALAQLPA 138
226309501  86 KFRGDAAVRSWLHTIVVNACLDRIRRNKSRAAFSLsSENAEE----Prd--------hrDYAAGVDMSLTVEQALASLPP 153
119718902  71 TFRGDAAVTTWLHRVVVNACLDRLRAAKVRRAEALpDDLEEYrdrgStasstpatedpaDLAVRDERRRLVLAALATLPD 150
21222299   69 TFRGQAAVTTWLHRITVNACLDRARKAASRKTAPV-DDTERL----Eqllep--hesasAPAERNDLHRQLLEALGTLPA 141
290959017  69 TFRGQAAVTTWLHRITVNACLDRARKAASRKTSPV-DDTERL----Eqllep--hesasAPAERNDLHRQLLEALGTLPK 141
182437480  68 TFRGQSAVTTWLHRITVNACLDRVRKAASRKTSPV-DDAERL----Dqllep--hesaeAPAVRQDLHRQLQEALATLPA 140
29830846   69 TFRGQSAVTTWLHRITVNACLDRARKAASRKTSPV-DDTERL----Eqllep--hesasAPAERNDLHRELMEALGTLPA 141
297563770  66 RFRGEAQVSTWLHRIVVNACHDRLRRRKVRPATPTeDETLDV----MsnerlgrsgggpDHASQTETRLDVNAALDLLPL 141
54027634  158 DQRTALVAVDLEGYSVADAAAMLGVPEGTIKSRCARARQRLQERLEFLRDPGNRK 212
226362877 139 DQRTAIVAVDLEGRSTSEAAVLLGVPEGTVKSRCARGRKKLAASLEYFRVEGNRS 193
111020634 139 DQRTAIVAVDLEGRSTSEAAILLGVPEGTVKSRCARGRKKLAASLEYFRVEGNRS 193
226309501 154 EQRAAVVAVDVEGYPVAEAAERLGVPVGTVKSRCARARKRLAAQLEDFREGGNHS 208
119718902 151 EQRAALVLVDMEGYPVAEAAQVLDCAVGTVKSRCSRGRARLAEVLAPLLADPAGD 205
21222299  142 DQRAALVLVDMQGYPVAEAARILDVPAGTIKSRCARGRARLLPLLTHLRPDGSGE 196
290959017 142 DQRAALVLVDMQGYPVAEAARILDVPTGTVKSRCARGRARLLPLLTHLRADAEGG 196
182437480 141 EQRAALVLVDMQGYPVAEAASILEVPTGTVKSRCARGRARLAPLVRHLRAGTGGR 195
29830846  142 DQRAALVLVDMQGYPVAEAARILDVPTGTVKSRCARGRARLLPLLTHLRAESGGE 196
297563770 142 DQRMALTLVDMLGYRVEEAAQILDVASGTVKSRCARGRARLLPSLAHLRNPRQAG 196
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