Conserved Protein Domain Family
PRK09638

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PRK09638: PRK09638 
RNA polymerase sigma factor SigY; Reviewed
Statistics
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PSSM-Id: 182010
Aligned: 15 rows
Threshold Bit Score: 249.937
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
52787786    2 DQADEKELIIRAKDGEDAAFTKLFQLHYPFVYQYVLKLTLNPDLTEDLVQETMLKAYVSLHQFQGNAKFSTWLISIASRL 81 
294499631   1 MEQDDFILVQKALQGDDDAFSLLFQRYHSFLYKYLLKLTLDEDLCSELCQEAMMKCYVNLSSYKNEAKFSTWMISIASRL 80 
295705020   1 MEQDDFILVQKALQGDDDAFSLLFQRYHSFLYKYLLKLTLDEDLCSELCQEAMMKCYVNLSSYKNEAKFSTWMISIASRL 80 
157694260   2 EQAEETLLIQRAKQGDDAAFTALYRHHYSFLYRYIMKLTLQQELAEEIMQETMLKAYMKLSSFRGDSLFSTWLISIASRQ 81 
56963737    1 --MDETALIRKAQKGDQVALATLLHENYLFLRRYALKITLKPSLADDLTQETMTKAIEKIHLYKGRSKFSTWLISIASNL 78 
167039303   1 --MEEKELIYKAKNGNKYALNELLSQNYNTLLGYCIKMTGNPMLAQDIVQETMLKAILNIKNFTPEVKFSTWLLKIATNT 78 
51892879    2 RPLHETELIRRAQRGDSAALATLLQQHYLPVKKYLVTITFDRALAEDLTQETMIRAIERVGQFQGRSRFSTWLMSIATRQ 81 
222529687   1 --MDEKRLIEEAKKGNKEALYKLIENNLNILSGFVTKMTQDYHFAQDVVQETLLRAIMNIDKFSPDAKFSTWLIKISINV 78 
302871542   1 --MDEKSLIEEAKKGNKEALYTLIENNLNILSGFVMKMTQDYHFAQDVVQETLLKAIMNIDKFSPDAKFSTWLIKISINV 78 
261409306   5 MIPGEEDLIRQAQLGDAAAMALLFKQHYSFLYKYLLKVTMDPMLAEDTAQDTIVRCMENMNRYNGTSSFSSWMITIATRL 84 
52787786   82 FIDHQRRKKRENRKTQAAGEEALRKMKWNSALHGHEWSEYLEMFAALEPEFRMPILLRHYYGFTYPEVANMLKIKEGTVK 161
294499631  81 YMDYLRKQKREKSSLQRIKQSLSHQLQWKAKYKGVEWSEMFSDFNELDSRFRIPVLLRHYYGYTYDEIAHMLNMRAGTVK 160
295705020  81 YMDYLRKQKREKSSLQRIKQSLSHQLQWKAKYKGVEWSEMFSDFNELDSRFRIPVLLRHYYGYTYDEIAHMLNMRAGTVK 160
157694260  82 FLDHQKKRKREQLREGKANQETMRRFKWEIQQKGHTWHEMWDALNELKAQERAPIILHYYYGFTYPEIASMLGMREGTVK 161
56963737   79 YIDMCRKQSKEELMAD--TETPLHQLKWEFAHRQLDWMDVVDELGKLSEGYRLPLILKHYYSYRYEEIGKMLGIPEGTVK 156
167039303  79 FKDYLRKHKNIELVEEIFSNSEEDVE--ETAMTNIQYSELMNILMKLPYEKRAVFILKHYYGYKYQEIAKIMDCPVGTVR 156
51892879   82 YLDWLRRERRERQAAERAADERPPAQ----PGPSAEGRTALELLQTLPPEVALPVVLKHYYGYTYEEIAEWMEIPVGTVK 157
222529687  79 YKDFLRKNKRYTYLDDSYKDYMQDVE--HAAISNSEYKDICSAILSLDYKFRAVFILKHFYGYKYKEIAKILNCPVGTVR 156
302871542  79 YKDFLKKNKRYAYLDDSYKDYVQDVE--HVAISNSEYKDICSAVLSLDYKFRAVFILKHFYGYKYKEIAKILNCPVGTVR 156
261409306  85 FIDNTRRKKREKKWLEQEAVQSARRMRWQMERRGEDWTDMLDGLSRLSEDHRIAILLKHYYGYSYEEIGTMLGIPEGTVK 164
52787786  162 SRVHHGLKKIRKEWGQ 177
294499631 161 SRVNKGVNILRKEWKE 176
295705020 161 SRVNKGVNILRKEWKE 176
157694260 162 SRVHHGLKKIRKEWS- 176
56963737  157 SRVHHALSLLRKELNV 172
167039303 157 SRLHNAIKEIMSEMGR 172
51892879  158 SRVFNGVRALRRGLVQ 173
222529687 157 SRLHFAIKFLIKELEK 172
302871542 157 SRLHFAIKFLIKELEK 172
261409306 165 SRTAYGIKQLRKEMGD 180
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