Conserved Protein Domain Family
PRK09636

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PRK09636: PRK09636 
RNA polymerase sigma factor SigJ; Provisional
Statistics
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PSSM-Id: 236600
Aligned: 77 rows
Threshold Bit Score: 348.449
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
226308144   4 PTTAQDFEQHRGHLTSVAYRLTGSFSDAQDAVQEAWIRLQVAQSRQgsdleIRELRGWLTTVVGRICLDHLKSAAVRRES 83 
30020517    1 METEQLYEAYQPLLFSLSYRILGSVMDAEDIVQDVFISLNNIEDPQs----IENMKAYLCKMATNRSIDKLRSAAHKRNV 76 
218897390   1 -------------------------------------------------------------MATNRSIDKLRSVAHKRNV 19 
218233483   1 METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIEDPQs----IENMKAYLCKMATNRSIDKLRSAAHKRNV 76 
218903588   1 METEQLYEVYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIEDFQs----IENMKAYLCKMATNRSIDKLRSAAYKRNV 76 
225864413   1 METEQLYEVYQPLLFLLAYRILGSVMDAEDIVQDVFISLNNIEDLQs----IENMKAYLCKMATNRSIDKLRSAAYKRNV 76 
118477845   1 METEQLYEVYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIEDLQs----IENMKAYLCKMATNRSIDKLRSAAYKRNV 76 
296502978   1 METEQLYEAYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIEDPQs----IENMKAYLCKMATNRSIDKLRSAAHKRNV 76 
163940227   1 METEQLYEAYQPLLFSLAYRILGSVMDAEDIVHDVFISFNNMEDVQs----IENMRAYLCKMVTNRSIDKLRSAAHKRNV 76 
49477707    1 METEQLYEVYQPLLFSLAYRILGSVMDAEDIVQDVFISLNNIEDFQs----IENMKAYLCKMATNRSIDKLRSAAYKRNV 76 
226308144  84 YVGQWLPEPIVTPVDatagtpsatpdPLEYVVTQEQNRFAALVVLDTLTPAQRVAFVLHDGFDVPFAEVARILDIEVATA 163
30020517   77 YVGMWLPEPLVEESDe----------PSKSFIMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
218897390  20 YVGMWLPEPLVEESDe----------PSKSFIMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 89 
218233483  77 YVGMWLPEPIVEESDe----------PSKSFIMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
218903588  77 YVGMWLPEPLVEESDe----------PSESFAMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
225864413  77 YVGMWLPEPLVEESDe----------PSESFAMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
118477845  77 YVGMWLPEPLVEESDe----------PSESFAMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
296502978  77 YVGMWLPEPLVDESDe----------PSKSFIMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
163940227  77 YVGMWLPEPFVEEIDd----------PSESFVMKESISTAYLLLLQQLTEVERVVFILREVFSYDYEEIASIVEKSSVNC 146
49477707   77 YVGMWLPEPLVEESDe----------PSESFAMKESLSTAYLLLLQQLSEVERIVFILREVFSYEYEEIASIVDKSSVNC 146
226308144 164 RQLASRARKAAASAP--VPVSSEEHAAAVERLVTAIASGDLNAVIDALDPDAVLIGDAGGTTRTAVNIVRGSDRVARFYL 241
30020517  147 RKIFQRARKSMLEKPkqSKLSTEKMASYVEKFVASLQCGDTEGMLEVLKTDAILKADGGGKVTTAINPIYSADRIIRLFF 226
218897390  90 RKIFQRARKSILEKPkqSKLSTEKMASYVEKFVSSLQCGDEEGMLEVLKTDAILKADGGGKVTTAINPIYSADRIMRLFF 169
218233483 147 RKIFQRARKSMLEKPkqSKLSTEKMASYVEKFVSSLQCGDAEGMLEVLKTDAILKADGGGKVTTAINPIYSADRIIRLFF 226
218903588 147 RKIFQRARKSILDKPkqSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFF 226
225864413 147 RKIFQRARKSILDKPkqSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFF 226
118477845 147 RKIFQRARKSILDKPkqSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFF 226
296502978 147 RKIFQRARKSMLEKPkqSKLSTEKMASYVEKFVASLQCGDTEGMLEVLKTDAILKADGGGKVTTAINPIYSADRIIRLFF 226
163940227 147 RKIFQRARKSILDKPkqSTLSTKKMAAYVEKFVSSLQCGDTQGMLEVLKTDAIFKADGGGKVTTAINPIYSADKIIRLFF 226
49477707  147 RKIFQRARKSILDKPkqSTLSTKKMAAYVEKFVSSLQCGDAQGMLEVLKTDAILKADGGGKVTTAIHPIYSADRIIRLFF 226
226308144 242 GLARKYGPaaVFSMSPVLVNGRLGGVFAGSPGDdqypqfaARVAGFTVRDGVVCAAYDIANPAKFSAVPM 311
30020517  227 GIAQRLTE--EYTVDFKMVNGIPGVIVTINNKV-------TYVLSFAFEDEKISNIYMMVNPEKLMHLNV 287
218897390 170 GIAQRLTE--EYTVDFKMVNGMPGVIVTINNKV-------TYVLSFAFEDEKISNIYMMVNPEKLMHLNV 230
218233483 227 GIAQRLTE--EYTVDFKMVNGIPGVIVTINNKV-------TYVLSFAFEDEKISNIYMMVNPEKLMHLNV 287
218903588 227 GVAQRLTE--AYTVDFKMVNGMPGVIVTINNKI-------TYVLSFAFEDEKISNIYMVVNPEKLMHLNV 287
225864413 227 GVAQRLTE--EYTVDFKMVNGMPGVIVTINNKI-------TYVLSFAFEDEKISNIYMVVNPEKLMHLNV 287
118477845 227 GVAQRLTE--EYTVDFKMVNGMPGVIVTINNKI-------TYVLSFAFEDEKISNIYMVVNPEKLMHLNV 287
296502978 227 GIAQRLTE--EYTVDFKMVNGIPGVIVTINNKV-------TYVLSFAFEDEKISNIYMMVNPEKLMHLNV 287
163940227 227 GIAKRLPE--KYSVDFKIVNGAPGVIVTINNKV-------TYVLSFIFEDEKISNIYMMVNPEKLMHLNV 287
49477707  227 GVAQRLTE--AYTVDFKMVNGMPGVIVTINNKI-------TYVLSFAFEDEKISNIYMVVNPEKLMHLNV 287
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