Conserved Protein Domain Family
vmrA

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PRK09575: vmrA 
MATE family efflux transporter
Statistics
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PSSM-Id: 236576
Aligned: 20 rows
Threshold Bit Score: 633.185
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
294138925   8 SISGSSKQSINRTFWRYAIPSVAAMLVNGFYQIVDGIFIGQYLGYEGLAGINMAWPIIYIFAGIGLMIGMGSGSLLSINR 87 
170724510   6 SPSDQTSSSISRTFWRYAIPSVAAMLVNGLYQIVDGIFIGQYVGYQGLAGINMAWPIIYIFAGIGLMIGMGSGSLLSINR 85 
157963864   5 SIENTQTQSISRTFWRYTLPAIAAMLVNGLYQIVDGIFIGHYIGFEGLAAINMAWPVIYFMVGFGIMVGMGSGSLLSIQR 84 
157373301   5 IQDITSDRSIQRTFWRYAIPSIAAMLVSGLYQIIDGMFIGHYLGYQGLAGINVAWPIIYVIAGVGLMIGMGAGSLISGSR 84 
167622147   5 SIENNSNDSISRTFWRYTLPAIAAMLVNGLYQIVDGIFIGHYIGYEGLAAINMAWPVIYFMVGFGIMIGMGSGSLLSIQR 84 
54303594    5 TIAIDSNESITRTFWRYAIPSIAAMVVNGLYQVIDGIFVGHYVGYEGLAGINIAWPIIGIIAGLGIMIGMGAGSLLSIYR 84 
37680877    1 ----MMNTSIYRQFWRYTIPTIAAMLVNGLYQVVDGIFIGHYVGAAGLAGINVAWPLIGSILGIGLMVGVGTGALASIRL 76 
27365071    1 -----MNTSIYRQFWRYTIPTIAAMLVNGLYQVVDGIFIGHYVGAAGLAGINVAWPLIGSILGIGLMVGVGTGALASIRL 75 
152996986   4 APQVQPLQSVAGTFWRFAIPSIVAMLVSGLYQIIDGFFVGHFVGADGLAGINMAIPLLGLIMGFGLLVGMGGGSVLSNYR 83 
59714099    1 MTTFHADSSITRTFWRYAIPSIAAMVVSGLYQIIDGIFVGHYIGFEGLAGINMAWPAICILGAIGVMVGMGTGSVMSIYR 80 
294138925  88 GQeqgsastgtgeetlAQSLKTNHTLATAAVLIIGFGLLGSLVLFMSGTSLLLAQGGTGNTLILAQQYIAPFSWSVTFTI 167
170724510  86 GEnsltg-----ddkkLVSTKVNNTLASALLLVIGFGLIGSIVLNLSVDTLLLMQGGSGQTLLMAQQYTTPFTWSLVFTI 160
157963864  85 GK--------------GDTRAAPTILTSSLVLMLSLAIISTSILVICSDFFLEAQGGAGNTLVMAQEYISVFTWGTAITV 150
157373301  85 GRsstsqr--gpieagNADKGVATILYTAMGLSIGFGAIFSYLLFLNGTDLLLAQGAEDQALVLAQQYISPFVWTAVITI 162
167622147  85 GK--------------GDTSAAPTILTTSLLSMLALAVASSAILSILSTFFLEAQGGAGTTLVMAQDYISVFSWGTAITI 150
54303594   85 GE--------------GNNAKAQQTLSSSLWLIALFGALTMLFIHYFGPALLTAQGAIGNTLNFSLDYINVFTWGAGFTI 150
37680877   77 GE--------------KQPQKAQAVLSTGLVLLLLMSPVVSILLWCFADDFLRLQGAQGEVFQLGLQYLDVLVFSCLFTL 142
27365071   76 GE--------------KQPQKAQAVLSTGLVLLLLMSPVVSILLWCFADDFLRLQGAQGEVFQLGLQYLDVLVFSCLFTL 141
152996986  84 GE--------------NNLPATQATLVTSLCLIILIGLLATVVFIAFGQTLLNLQGATGVTLELSWSYVQTMSFGALISI 149
59714099   81 GE--------------NKLEKTKVALTTGFWLLAILSIIAISCIVLLAKDILLAQGAEGQNFAYAMDYINVLMFGGFFTA 146
294138925 168 LASAIPILIRNDESPNLATGLMVMGACLNILLDYIFIVQLNMALHGAAIATVSAQIAVASCGVIYFLSSFTKMKisnltL 247
170724510 161 LAAAIPILVRNDESPNIATGLMVMGACLNIVLDYLLIVQFNMALQGAAIATISAQISVSILGIGYFISSKTDFK-----F 235
157963864 151 IASALPLLIRNDESPNIATGLMVLGAFINIALDYLLIGVFDFGLLGASIATISAQATVCVLGLIYFCSRFSSIN-----W 225
157373301 163 LASALPMLVRNDESPNIATALMVTGACMNIVLDYLLIVQFDMGLKGAALATVSAQLSVCVGGFAYFLSTKTQLK-----L 237
167622147 151 IASALPLLIRNDESPNIATGLMVLGAFINIALDYLLIGVFEFGLLGAAIATITAQLTVCILGLVYFCSRISNIS-----W 225
54303594  151 AAGALPMLIRNDDSPNFATGLMILGAVMNIILDYLFIGLFYLGLKGAAIATVISQLTVLIIGVGYFFSARSQIK------ 224
37680877  143 GSIAMPILLRNDGSPNLATMLMVLGAITNIVLDYLFIGLLQWQLTGAAIATALAQMVVLLVGLSYFFSRKAKLR-----L 217
27365071  142 GSIAMPILLRNDGSPNLATMLMVLGAITNIVLDYLFIGLLQWQLTGAAIATALAQMVVLLVGLSYFFSRKAKLR-----L 216
152996986 150 GASAMPMLVRNDDSPNRATVFIVAGALTNIVLDYIFLGYLDMGLRGAAIATLIAQSITCILCLRYFTSSKAKTK------ 223
59714099  147 CATALPMLVRNDESPNVATFLLVIGALINIVLDYVFIGVMGLGLSGAALATLMAQACVTVLGIGYFFTQRSSIQ-----I 221
294138925 248 NFANIRFDIKLARQILLLGSSSFVMYLYTSFVFALHNRLFMEYGSPVTVGAFAIVGYLMVLYYFVAEGLGEGMQPPVSYF 327
170724510 236 NASAFIFSPKLAGKIMILGASSFVMYLYTSFVFALHNRLFMEYGSSLTVGAFAIVGYLMVLYYFVAEGLGEGMQPPVSFF 315
157963864 226 SAKFSWFNASFAQQITLLGSSSLFMYLYTSFVFALHNRLFTEYGTPLTVGAFAIVGYLMVLYYLVAEGVAEGMQPPVSYY 305
157373301 238 SEYRPSFHTKLAGKILLLGSSSFVMYIYTSFVFALHNRLFMEYGTSLTVAAFTIVGYLMVLYYFIAEGIGEGMQPPVSFF 317
167622147 226 PSKFRYFNASFAKQIVLLGSSSLFMYLYTSFVFALHNRLFIEYGTPLTVGAFAIVGYLMVLYYLVSEGIAEGLQPPVSYY 305
54303594  225 -INKLTFNFAIASKAVTLGASSLCMFLYFSFIVALHNKLFMVYGTSVHVGAFAIIGYLGTMYYLIAEGIASGMQPPVSYY 303
37680877  218 SKHNFSFQWRLLPQIFAIGTSSFFMYAYGSMMVALHNSLLLSYGSPVLVGAYAILGYIIVVYYLIAEGIANGMQPLASFY 297
27365071  217 SKHNFSFQWRLLPQIFAIGTSSFFMYAYGSMMVALHNSLLLSYGSPVLVGAYAILGYIIVVYYLIAEGIANGMQPLASFY 296
152996986 224 -LALKQLDKAIAIRIVQLGSSNLVMFIYFSFVMAFHNLQFMTYGNTTQLAAFAIVGYLASCYYFFAEGLVSGLQPPVSYY 302
59714099  222 TLQEVLFSWNKAKQSLSLGASALVMYLYGSFVVAMHNALMMYYGSATTVGAYAIVGYLFMLYYLLAQGIAEGAQPPISYY 301
294138925 328 FGAKQTENIKKVLVLATKVTITAGIAWLLVLNLFPSTIIGLFNAEDTSLIQEATSGIRLHLFAMFLDGYLVLAIMFFMAV 407
170724510 316 FGAREPKNIKRMFQLAAKVSISAGLLWVLILNLFPEAIIGLFNSEDRALMTETIVGIQLHLFAMFLDGFVVLAIMYFMAV 395
157963864 306 YGAEQHENINKMLKLSVKVTLIAGTSWVLLLNLMPETMVGLFNNDDPLLIATAIDGIKMHLFAMPLDGFIALSSVYFMAT 385
157373301 318 LGAAQPHNIKKMVLLAATVSLTIGISWTAILNLFPETMIGLFNSDDPELIRETITGIHLHLFGMFLDGLVVLAIMYFMAV 397
167622147 306 YGAEQHANINKMLKLSIKVTLIAGTSWILLLNAIPETMVKLFNSSDSELIATAVDGIRMHLFAMPLDGFIVLSSVYFMAT 385
54303594  304 FGSKQIDKIKATVVLALKIILISGVVSVVLLNMYPETVISLFSKNDPLLLAETQNGLRLHLFALYLDGFIFLASVYFMAV 383
37680877  298 HGAGHSDNIKKLLKIAMSSAVLTGMVFIGLLNIFPEQVVAVFNANDAELTQHTITGIRLHMFAMFLDGFLVVTAAYYQSV 377
27365071  297 HGAGHSDNIKKLLKIAMSSAVLTGMVFIGLLNLFPEQVVAVFNANDAELTQHTITGIRLHMFAMFLDGFLVVTAAYYQSV 376
152996986 303 LGAKQYNRIIKTVKLAFSVTVGSGIALIILLNLFPEFFISAFASGDSALVAASKNGIRLHLMALFLDGFLFMASIYFVAV 382
59714099  302 FGARENKKVYQIFKIALKWVIITGIGWVTILNISPELTTALFTNGDKALIAETIVGIRYHLFAMFLDGMIVLITIYFLSV 381
294138925 408 NQGKKALGISIGNMLIQLPFLYFLPPWLGVKGVWLAMPISNVLMFIIVAPMVWHYLKTDK--------DRKVNQFLE 476
170724510 396 NQGGRSLWISVGNMVVQLPFLFILPKVFGINGVWLAMPVSNLVIFAVVAPMVWRHLNSAI--------ESGRELSTA 464
157963864 386 NQGVKALVIACGNMLIQLPFLYFLPKVMGVEGVWMAMPLSNIALCLIVAPMVWFDVKSRKkqsraqqdNPLTIDTAA 462
157373301 398 DQGGKSLAISLGNMLIQLPFLYILPKWLGIYGVWIAMPLSNVVMFIIVAPMVWRHMNAAT--------SHKQIASLA 466
167622147 386 NQGVKALVIACGNMLIQLPFLMILPKFFGVDGVWMAMPISNIALCLIVVPLVWLDVKARArk-----fGPTTTEAVI 457
54303594  384 NQGGKALTISIGNMLIQLPFLYFLPQWLGVDGIWLSVPISNIVLTLIVAPLLWRDIQRSS--------QKHSELITN 452
37680877  378 NRGGKALFVSIGNMMVQLPFLFIMPKLLGITGVWLAFPLSNIALTLVVAIMLWRDIKRMP--------KNQWVEA-- 444
27365071  377 NRGGKALFVSIGNMMVQLPFLFIMPKLLGITGVWLAFPLSNIALTLVVAVMLWRDIKRMP--------KNQWVEA-- 443
152996986 383 GKSAQALFVSVGNILIQIPFLFVLPKYLGIDGVWLAVPLSNIAFVLIVLPMLLINLKGLKkmh---nqQSDIAARAV 456
59714099  382 NEGKKAMVISISNIVIQLPFLLILPKWFGIDGVWLAMPVSNIALIICIAPMVWNHLKTQKii-----kPLPLTSTSV 453
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