Conserved Protein Domain Family
PRK08780

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PRK08780: PRK08780 
DNA topoisomerase I; Provisional
Statistics
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PSSM-Id: 181555
Aligned: 23 rows
Threshold Bit Score: 1429.16
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
121999104   1 MGKSLVIVESPAKARTINKYLGSDYEVMASYGHVRDLVPKEGAVDPSSGFAMKYAPIDKNQKHVDAIAKAARKADALYLA 80 
21233183    1 MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKNEKHVEAIARAAKSADDIYLA 80 
66770123    1 MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKNEKHVEAIARAAKSADDIYLA 80 
188993331   1 MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKNEKHVEAIARAAKSADDIYLA 80 
188574927   1 MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNSFAMRYDLIEKNEKHVEAIARAAKGADDIFLA 80 
300115532   1 MSKNVVVVESPAKAKTIKKYLGKNFEVLASYGHVRDLMPKEGAVDPEHGFKMKYQAIEKNGRHVNAIAKALKSADSLLLA 80 
292493775   1 MSKNLVVVESPAKAKTIKKYLGKDFEVMASYGHVRDLMPKEGAVDPEHGFAMKYQVIEKNSRHVDAIAKALKKADALLLA 80 
77166457    1 MSKNVVVVESPAKAKTIKKYLGKNFEVLASYGHVRDLMPKEGAVDPEHGFKMKYQAIEKNGRHVNAIAKALKSADFLLLA 80 
220933378   1 MSKHLVIVESPAKAKTIKKYLGPDFEVMASYGHVRDLVPKEGAVDPDHGFRMNYQVIDRNERHVESIVKALRKADSLLLA 80 
289209437   1 MSKHLVIVESPAKGKTIEKYLGPDYQVMASYGHVRDLVPKEGAVDPENGFRMKYDVIERSEKQIEAIAKALKKSDDLILA 80 
121999104  81 TDPDREGEAISWHLVELLRDKGTLDDKPVYRVVFHEITKGAIQEAMNNPRDISEELVNAQQARRALDYLVGFNLSPLLWR 160
21233183   81 TDPDREGEAISWHIAEILKERGLLKDKTMQRVVFTEITPRAIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWR 160
66770123   81 TDPDREGEAISWHIAEILKERGLLKDKTMQRVVFTEITPRAIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWR 160
188993331  81 TDPDREGEAISWHIAEILKERGLLKDKTMQRVVFTEITPRAIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWR 160
188574927  81 TDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPRAIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWR 160
300115532  81 TDPDREGEAISWHLLELLKEEGVLEDKAIQRVVFYEITSQAVNEAVAHPRDISLDLVNAQQARRALDYLVGFNLSPLLWK 160
292493775  81 TDPDREGEAISWHLLELLKERGALEGKSIKRVVFYEITQQAVNEAIAHPRDISSDLVNAQQARRALDYLVGFNLSPLLWK 160
77166457   81 TDPDREGEAISWHLLELLKEEGVLEDKAIQRVVFYEITSQAVNEAVAHPRDISLDLVNAQQARRALDYLVGFNLSPLLWK 160
220933378  81 TDPDREGEAISWHLYELLRERGVLDAKTVQRVVFYEITQRAVKEAIEQPRGLSFDLINAQQARRALDYLVGFKLSPLLWK 160
289209437  81 TDPDREGEAISWHLYEVLRDRGLLDDRGVHRVVFHEITKKAIQQAIEEPRDLAKPLIDAQQARRALDYLVGFNLSPLLWR 160
121999104 161 KITSGLSAGRVQSPALRMICERETEIEQFEPQEYWSVEADAAKAQQPFMAKLSQLHGEKVRQFTITDETHAQEVDRTLRE 240
21233183  161 KVQRGLSAGRVQSPALRMIVEREEEIEAFIAREYWSIDAHCRHPSQPFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ 240
66770123  161 KVQRGLSAGRVQSPALRMIVEREEEIEAFIAREYWSIDAHCRHPSQPFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ 240
188993331 161 KVQRGLSAGRVQSPALRMIVEREEEIEAFIAREYWSIDAHCRHPSQPFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ 240
188574927 161 KVQRGLSAGRVQSPALRMIVEREEEIEAFIAREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ 240
300115532 161 KIRRGLSAGRVQSPALRLICEREKEIDAFKVREYWTLEADAAAAKQPFVAKLTHLDGRKLTQFDIENKDQALALVERLTK 240
292493775 161 KIRRGLSAGRVQSPALRLICEREKEIEAFKIQEYWTLEADAAASKHPFVAKLTHLDGHKLGQFDIDNGDRAQALVEQLTK 240
77166457  161 KIRRGLSAGRVQSPALRLICEREKEIDAFKVREYWTLEADAAASKQEFVAKLTHLDGKKLAQFDIESKDQALALVDRLTK 240
220933378 161 KIKRGLSAGRVQSPALRMIVEREEEIERFQTREYWTLEADLDKSGQAFNAKLHTLDGKKLDQFDIADEVTASAARNTLLS 240
289209437 161 KIKRGLSAGRVQSPALRMICERENEIEAFVPREYWTLDAKVERQEQPFTARLTYLDGNKLDQFDLNSAELAHDAQKRLTE 240
121999104 241 AARaqpdparigptgdgeteviGTLRVASVERKQRRRNPAAPFITSTLQQEASRKLGFTASRTMRIAQQLYEGIDVGEGS 320
21233183  241 AAQ-------------------GVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDEG 301
66770123  241 AAQ-------------------GVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDEG 301
188993331 241 AAQ-------------------GVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDEG 301
188574927 241 AAQ-------------------GVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDEG 301
300115532 241 AAA-------------------GELWVIKVERKQRRRNPAAPFITSTLQQEASRKLGFSAKRTMSVAQQLYEGVDIG-DG 300
292493775 241 AAS-------------------GELLVIKVERKQRRRNPAAPFITSTLQQEASRKLGFSTKRTMSVAQQLYEGVDIG-DG 300
77166457  241 AAS-------------------GELRVIKVERKQRRRNPAAPFITSTLQQEASRKLGFSTKRTMSVAQQLYEGVDIG-DG 300
220933378 241 AAD-------------------GRLRVARIEKKQRRRNPAPPFTTSTLQQEAVRKLGFSASRAMRVAQQLYEGIDLG-AG 300
289209437 241 AAN-------------------GELRVAKVEKKQRRRNPAAPFTTSTLQQEASRKLGFTASRTMRTAQQLYEGIDLG-SG 300
121999104 321 AVGLITYMRTDSVNLSGEAITEMRQAITDRYGADKLPGQAQVYKTRSKNAQEAHEAIRPTSASRHPDDVRAYLNEEQRKL 400
21233183  302 SVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRPTSALRTPAQVARFLSDDERRL 381
66770123  302 SVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRPTSALRTPAQVARFLSDDERRL 381
188993331 302 SVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRPTSALRTPAQVARFLSDDERRL 381
188574927 302 SVGLISYMRTDSVNLSQDALSEIRDVIARDYGTASLPDQPNAYTTKSKNAQEAHEAVRPTSALRTPAQVARFLSDDERRL 381
300115532 301 AMGLITYMRTDSVNLANEAVGEIRNFIAERFGQNSLPVKSRTFKTRAKNAQEAHEAVRPTSVYRVPEALKPYLKPEQFKL 380
292493775 301 AVGLITYMRTDSVNLANEAVKELRDFIAGHFGEKSLPAKPKTFKTRAKNAQEAHEAIRPTSVYRTPEELKPHLKPEQFKL 380
77166457  301 AIGLITYMRTDSVNLANEAVGEIRNFITERFGQSGLPAKPRTFKTRAKNAQEAHEAVRPTSVYRVPEALKPHLKPEQFKL 380
220933378 301 PIGLITYMRTDSVTLAGEAIAEIRRLIEQRYGRNTLPEHPRQYKTKAKNAQEAHEAVRPTSVMRAPEEVKRHLTTDQFKL 380
289209437 301 AIGLITYMRTDSVALAGEAIGEIRGLIEERYGANNVPDSPRQYKTKSKNAQEAHEAIRPTSVRRLPNEVRARLSSDQARL 380
121999104 401 YDLIWKRAVASQMKHATIHTVAVDLAADADa---------rHLLRATGSTVADPGFMVVYREGNDEGKDDSGE--KFLPE 469
21233183  382 YELIWRRAVACQMIPATLNTVSVDLSAGSE-----------HVFRASGTTVVVAGFLAVYEEGKDTKSSEDEDegRKLPL 450
66770123  382 YELIWRRAVACQMIPATLNTVSVDLSAGSE-----------HVFRASGTTVVVAGFLAVYEEGKDTKSSEDEDegRKLPL 450
188993331 382 YELIWRRAVACQMIPATLNTVSVDLSAGSE-----------HVFRASGTTVVVAGFLAVYEEGKDTKSSEDEDegRKLPL 450
188574927 382 YELIWRRAVACQMIPATLNTVSVDLSAGSE-----------HVFRASGTTVVVPGFLAVYEEGKDTKSSEDEDegRKLPL 450
300115532 381 YQLIWRRTIACQMNHATIDAVAVDLDTQKAaperg-edargNIFRATGSTVVDPGFMAVYQEGRDDAKGEEEQ--RKLPP 457
292493775 381 YQLIWRRTIACQMNHATIETVAVDLDTRKSvpekgvsntgsNIFRATGSTVVDPGFMAVYQEGRDDTKAEEEQ--RILPP 458
77166457  381 YQLIWRRTIACQMKHATIDTVAVDLNTQKLapegg-nsasgHIFRATGSTVVDPGFMAVYQEGRDDIKGEEEQ--RKLPP 457
220933378 381 YDLIWKRTVACQMQHATLDTVSADLAAGSEr----------HLFRASGSSVRDPGFMAVYQEGKDDAKEESDE--RILPP 448
289209437 381 YDLIWKRTVACQMIHATFDTVAADLVPGDSr----------HQFRATGSTLVDPGFIAVYQEGRDDAQDDDED--KRLPE 448
121999104 470 LEEGEQVDLHAIRAEQHFTEPPPRYTEASLVRALEEYGIGRPSTYASIISTLQNRNYVEMDGKRFIPTDIGRTVNKFLTE 549
21233183  451 MKAGDNIPLDRIVTDQHFTQPPPRFTEAALVKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSG 530
66770123  451 MKAGDNIPLDRIVTDQHFTQPPPRFTEAALVKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSG 530
188993331 451 MKAGDNIPLDRIVTDQHFTQPPPRFTEAALVKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSG 530
188574927 451 MKAGDNIPLDRIVTDQHFTQPPPRFTEAALVKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSG 530
300115532 458 MKEGDRVALLQIRPEQHFTEPPPRYTEASLVRALEEFGIGRPSTYATIISTLQQRDYTVLESKRFQPTDVGRVVNRFLTE 537
292493775 459 MKEGDRVELVRIRPEQHFTEPPPRYTEASLVRALEEFGIGRPSTYATIISTLQQRSYALLENKRFHPTDVGRVVNRFLTE 538
77166457  458 MKEGDRVTLLQIRPEQHFTEPPPRYTEASLVRALEEFGIGRPSTYATIISTLQQRDYAVLENKRFQPTDVGRVVNRFLTE 537
220933378 449 LEEGDIVKLEALRAEQHFTEPPPRYTEASLVKALEEYGIGRPSTYASIISTLQQREYVEMDSRRFIPTDIGRIVNAFLTQ 528
289209437 449 MAEGDTVQLEEVTADQHFTEPPPRYTEASLVKTLEEYGIGRPSTYASIISTLQSREYVEMDGKRFIPTDTGRIVNSFLTQ 528
121999104 550 HFDRYVDYDFTARLEDDLDAISRGEQDWVPVLEAFWEPFRERVEEKK-NVSRQEAVQARELGTDPKTGKPVTVRIGRYGP 628
21233183  531 HFTRYVDYDFTANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKdSLDKTDAGSVRVLGADPVSGKEVSARIGRFGP 610
66770123  531 HFTRYVDYDFTANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKdSLDKTDAGSVRVLGADPVSGKEVSARIGRFGP 610
188993331 531 HFTRYVDYDFTANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKdSLDKTDAGSVRVLGADPVSGKEVSARIGRFGP 610
188574927 531 HFTRYVDYDFTAKLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKdSLDKTDAGSVRVLGTDPVSGKEVSARIGRFGP 610
300115532 538 HFNPYVDYDFTARLEDELDAISRGEKVWIPVLEEFWGPFSARIQEKEqNVSREEAVQARELGVDPQSSRPVSVRMGRYGP 617
292493775 539 HFNPYVDYDFTARLEDQLDAISRGEKVWIPVLEEFWEPFLGRIQEKEqSVSREEAVQARELGIDPKSGRPVSVRIGRYGP 618
77166457  538 HFNSYVDYDFTARLEDELDAVSRGEKVWIPVLEEFWGPFSARIQEKEqNVSREEAVQARELGIDPQSSRPVSVRMGRYGP 617
220933378 529 HFTQYVDYDFTARLEDELDEISRGEKEWVPVMEGFWSSFKEQIEEKEaTVTRAEAVQSRELGIDPKSGRPVSVRMGRYGP 608
289209437 529 HFDRYVDYDFTAKLEDELDAISRGEKDWVPVLEDFWGDFRDRVKEKEeNVTRAEAVQSRELGPDPQSGRPVSVRLGRFGP 608
121999104 629 FAQLGSRDDDEKPRFAGLRPGQSIDTITLDEALQLFKLPRDMGEtDEGEDVQVSIGRFGPYVRYGKKFVSIPKDEDPYTI 708
21233183  611 MVQIGTVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQ-DKDQDVSVGIGRFGPFARRGSVYASLKKEDDPYTI 689
66770123  611 MVQIGTVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQ-DKDQDVSVGIGRFGPFARRGSVYASLKKEDDPYTI 689
188993331 611 MVQIGTVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQ-DKDQDVSVGIGRFGPFARRGSVYASLKKEDDPYTI 689
188574927 611 MVQIGSVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQ-DKDQDVSVGIGRFGPFARRGSVYASLKKEDDPYTI 689
300115532 618 YIQIGSKEDEEKPRFAGLQPGQKMDAITLEEALALFKLPRELGFtPGGERVSVNIGRFGPYVKYDNKYVSLRGE-DPHTI 696
292493775 619 YVQIGSKEDEEKPRFAGLRPGQKMDTITLEEGLALFELPRELGFsPEGEKVSVNIGRFGPYVKYDNKYVSLRGE-DPYTI 697
77166457  618 YIQIGSKEDEEKPRFAGLQPGQKMDAITLEEALTLFKLPRELGFtPGGEQVSVNVGRFGPYVKYDNKYVSLRGE-DPHTI 696
220933378 609 VVQIGTKDDEEKPRFAGLPPGKKMDAVTLEEALELFKLPRELGEtPEGEPVSVNIGRFGPYVKFGSRYASLKPEDDPFSI 688
289209437 609 IVQIGTKDDEEKPRFAGLLPGQKMDKITLDEALELFKLPRDLGEtPEGEPVMVNIGRFGPYVKYGSKYASLGPDDDVWTI 688
121999104 709 TKERAHELVREKKQADANRIIHDF-GDGIQILRGRYGPYITNGEKNAKVPKDREPDSLTHEECQDLIAKA--PARKGRRG 785
21233183  690 DLARAVFLIEEKEEIARNRVIKEFdGSDIQVLNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTgkPVRKGFGA 769
66770123  690 DLARAVFLIEEKEEIARNRVIKEFdGSDIQVLNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTgkPVRKGFGA 769
188993331 690 DLARAVFLIEEKEEIARNRVIKEFdGSDIQVLNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTgkPVRKGFGA 769
188574927 690 DLARAVFLIEEKEEIARNRVIKDFeGSDIQVLNGRFGPYISDGKLNGKIPRDREPASLTFEEVQQLLADTgkPVRKGFGA 769
300115532 697 PLERALVLIEEKRQADANRVIKVFpDSGIQVLNGRYGPYVTDGERNVRVPKEQAPEELSLEQAQTLIHEA--PVKRARR- 773
292493775 698 ALERALELIQEKKQADANRVIKVFpDSGIQILNGRYGPYVTDGERNARVPKDQAPEKLSLEQAQTLINEA--PAKRARR- 774
77166457  697 SLERALALIEEKKQADANRVIKVFpDSGIQVLNGRYGPYVTDGERNARVPKEQAPEALSLEQAQALINEA--PVKRARR- 773
220933378 689 ELPRALELVAEKKEADANKYIRVFdEAGVQVVNGRYGPYITDGNKNARIPKDRDPKSLTLEECQALLAAA--PERKGRRG 766
289209437 689 ELPRALEIVAEKKKKDAERFIKSFdEEGIQVLNGRYGPYVTDGNKNAKIPKETDPKSLTLEQCQELIAAA--PERKGRGR 766
121999104 786 GAAKGGRGRSk------aTS 799
21233183  770 KKATLKKNAVk------dSA 783
66770123  770 KKATLKKNAVkdsakeakda 789
188993331 770 KKATLKKNAVk------dSA 783
188574927 770 KKATLKKNAVk------dSA 783
300115532 774 KAGSRKKAKG---------- 783
292493775 775 KTGTRKKAKG---------- 784
77166457  774 KAGTRKKAKG---------- 783
220933378 767 VKKAAPKKKAaapkkaapkk 786
289209437 767 KGAAKSTGKSsgktasksST 786
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