Conserved Protein Domain Family
secD

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PRK08343: secD 
preprotein translocase subunit SecD; Reviewed
Statistics
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PSSM-Id: 236245
Aligned: 48 rows
Threshold Bit Score: 416.198
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
91773924    5 EVPKGLKNDMRVWLLIAAVVLSVVMIGpgysa----------------------------------------------ee 38 
76801904    1 -MNLQLKKHWRIWLLVVFVLISTVALFgplgddaadeptgdaapeiegeqqgdemeaaqpdgdpdgeqpvgqvngdvata 79 
110668983   1 --MIDFRENWRIILLVIVVIVSLFALVsptlasgpds------------------------------------nsavvqq 42 
55379774    1 --MSTLKENWRVVALVTLLLLSAVALFipgvppgtsd------------------------------------tegagaa 42 
257053750   1 ---MNIRENWRIVLLVVFVLGSGIALFapvtgg--------------------------------------------add 33 
257387377   1 --MSGLRDNWRIILLVVLALGSTVTLLvpgatvatgdnat------------------------------aqtdganasa 48 
284164035   3 GPVAFVKNHWRLLLLVVFITGSMVSLFvpggvmggn-------------------------------------dyvetqd 45 
289582359   4 NPIGFVKEYWRILLLAIFIAFALVALFipggimaddslagd----------------------------leedeenqtie 55 
292656105   1 --MSTLRDNWRVIFLVAAILLSTFALFsptmgnqs----------------------------------------piged 38 
300710294   2 SGLSTLRKHWRIALLIVLVAVSAAVLFapqfgpddg--------------------------------------ggpvad 43 
91773924   39 glNTDLNYGLDLEGGSWIQIKLQGAVtqldadismlvteivesaidapihiisvtgntgegysnagntvtfttsayvsdl 118
76801904   80 sqITNLQFGLELSGGTQVRAPFIGMTvsnlefgpdeqgdieqtlqdeldlgtgdvradaedgt----------------- 142
110668983  43 ssQTNLQYGLELAGGTRVRAPLVGVTaeevefepanareveqriataidgagpadviarpvt------------------ 104
55379774   43 nqSTNLQYGIQLSGGTRIQAPIVGTTaegvdvapadeadlaqatadrlgldpidvrvsnq-------------------- 102
257053750  34 ggITNLQYGIQLDGGTSIQAPAVGITaedvnvrfqqetaleqnlseslsldladirvsne-------------------- 93 
257387377  49 agITNLQYGIQLDGGSRIRAPIVGITaenvdiqpvgrgdetnetiaiedelvsqlgvdpvdvnarap------------- 115
284164035  46 sgATNLEYGLDLEGGTRISAPVTGMTaenidagavsddgsvdqerlteiertlydetgletgnvrvsv------------ 113
289582359  56 esMSNIEYGIGLDGGTRVSAPPTGMMvdnidleseqhselesslytelgletadatvrhhede----------------- 118
292656105  39 dsATNLQFGLQLDGGTRIRAPLVGVTaedvefegdservverqvaaqiagadaadiivrtga------------------ 100
300710294  44 tgpTNLQFGLELSGGTRVRAPLAGLTaegvdvdagqeaqiesevatelgisgrnvnaypgeta----------------- 106
91773924  119 qidllglgesdisysddisnivlftdkqtlimqylskalntevvplfigddveyeirtgvsleelqalmvpvggnvltgs 198
76801904  143 -----------------------------------------------------vevfqdeyvggiersdfaaamqeagys 169
110668983 105 ------------------------------------------------------ettgtvevtvegvsttelqsilestg 130
55379774  103 --------------------------------------------------------tetvevfsnnvstgeveaaleaeg 126
257053750  94 --------------------------------------------------------sstvevfvrnvthdqlrnalnaeg 117
257387377 116 -------------------------------------------------nepnadgtvevytenvtqaelaaalqeqgyd 146
284164035 114 -------------------------------------------------dddgnahaelftenvseeefaaalaeagvev 144
289582359 119 -----------------------------------------------------drytaevfvddvsaadfaaviaeydad 145
292656105 101 -------------------------------------------------------esstveatienvtaddlsaaldaag 125
300710294 107 -----------------------------------------------------edgtveittdavseedflaalrvvevs 133
91773924  199 dgdaifregvRTETRDMTRDILSEKLNSLGLKDIPVRTV-----GDE------YILIDFAGTDLTTAKDIVEKPGKFEIR 267
76801904  170 vdtgdvgmgvTGDTRDGVEDVLNDRLRERGLGGGSAAQVsa--pGQQ------FMVVEVPGADRETVVDLIGERGQVEIW 241
110668983 131 ytastvrtgvTETTRQEVVRILENKINEAGLSGGTVQEV-----TTAgg--ghFILIEVPNEDAASVRSLVSERGTVVVQ 203
55379774  127 yepsevrpgvTRDTRENMVSVINDKLRESALTGGSVQQV-----SSPgg--rsFISVTAPDRGREELIGLLEERGVVRVY 199
257053750 118 yqpgtvrdgvTGQTREDMVDVIRDKITESALSGGSVSRL-----NAIeg---nLISITAPDRDREELRSLLNERGIVRVY 189
257387377 147 vsesdvrdgvTRATRDEMVEVIDEKLSQSALSGGSVQSA-----QSAtg--qnFVVIEAPGRDIDELRSIVANRGIVRVY 219
284164035 145 dpdddirtgvTPETRQQMVDTIQSRINAAGLSGGNVYESarlggGY-------YIVTEAPDMDADELRSLLGERGIVEVQ 217
289582359 146 vseddvengvTQETRDRMVQTIEQRVNEAGLSGGQVY-------QEAtvegsyYIVTEVPGMSPEELRELLADRGDVQVQ 218
292656105 126 yahgevrdgvTGTTRAETVRVLQSKINEAGLSGGTVQQV-----TTAtg--ehFILVEVPNRDQSDVVDLVGERGTVQID 198
300710294 134 gedteirqgvTERTVNEAVEVLDEKIRESPFATGDARKS-----TSStg--eqFVVVEVPGEDRGTVIDLIEDRGFVEVY 206
91773924  268 Mqtt-gnE---------SVH-VLYGDSIEKVGIVTQMDGY----WNTPFTLDE-------DGAFALQKIAIESGain--- 322
76801904  242 AlfpgddGdy------eTRS-LLDQDDLADIGQARQDDG-----YYVPIRLDE-------QAGPRFGQAMRDHGfdqdgg 302
110668983 204 Ahypqd-------diytQQT-VLQQDNFQSIGSAQEGQSGg---AYVPVTVRE-------SAANEFQQATVDTTlarpgg 265
55379774  200 AvhdnteNgs-----yvREQ-VLSQGDFAGIGAAQRSETQg---THVPVTVKQ-------SVAERYANDMVEAGfgsgst 263
257053750 190 Avhp-deNgs-----fvPSQ-VLGQDEFGRIGTAQEREVAdgteAFVPVTIND-------DVAERFQQDMVEYGfnqdrn 255
257387377 220 Ggya-adNgt-----fvRQQ-IVSREDIDGIGNARKVDGRq--gYRVSVTIRE-------DAVDQFLDGVRATGldepnt 283
284164035 218 AyypengTq-------eNET-ILSGDDIENVDPPTTDRNGn---DIVPVQVDS-------NAAPEFQSRLNELGftdegv 279
289582359 219 AyypdedGnq------tNETvLHGEDDFSRIGVASYNDEQg--yNYVPVTVDDtedadgnSAASEYQAAMNEYGftsegi 290
292656105 199 Iyyp-tgTdngsrtyetREA-VLTQADFTSIGTAQESQTGs--gAFVPVSVRD-------DPAAEFQTAIQDTGlaqpgg 267
300710294 207 Ahhp-teEgy------tNTT-AIQPDDINSIGSPQD-EPPy--gPHIGITLTE-------EGAEDFSGVMQETGftqegv 268
91773924  323 -----------------dpnSHLLYMYLDDREVYGAPLSYSAASTLNEHPIYSWQASTGADEDGKTQAEQLQIHLRAGA- 384
76801904  303 vrcnydl-srsleenlddepGRCLMTVLDGEVVFAAGVNPNLSSSFASGAF-DDDPSYRTTTTSFEDARDLEINMRAGA- 379
110668983 266 trc--------tysrdqnstEPCLLLVVNGEVTNSFGMAPRLADSLRGGSWAQDPVFQLQTA-NVSEAQEVAINLRAGA- 335
55379774  264 crdsd-----ydhenlqnsqADCLVTTLNGEPVFIGGVDPGLGQSYRNGEFANNPQFIMQTS-NMSEATELELALKAGR- 336
257053750 256 cgydr-----sqitnvsavdDYCLVTTLNGEIVFSGGVDGDLGRSFASGGFATDPSFRMTTGENMTQAKDLEISLRAGR- 329
257387377 284 argais--ceynaenpnqssGKCLIASLNNEVVTAKGVSPGLVQLFADGSFANDPTFVIETN-TREEARNIELSLKAGQp 360
284164035 280 gqcglrg-dgesinfdhegeRYCLLTVIDGKVVDAHSMGPDLASSMRAGSW-ENDPSFQMGAQNLEQAQTLSVNLQSGS- 356
289582359 291 qqcgiqdreagefdfdhdqpQWCLLTMVDGEVVDAHSMGDRLGSNMASGEW-ANDPTFEMITPTQQDAHQLAVNLESGA- 368
292656105 268 trct------ymedggrnttEGCLLLVVNGEVVNAFGMSGGLADTMRAGEWAGAPSFQLQTR-NTSEAQEIAINLRAGA- 339
300710294 269 eac--------rwdqnrddpGYCLLTVVDGEVVYSASLGESLAASMESGTYANDPSFVMSGR-SIEDVRELRVNLLAGA- 338
91773924  385 LPVNVVLMG-----SGQVDAALGAQFKRQVALAGLFALLAVAAVVFRRYHQKEILLPMVGTSICEVIMILGFAGAVNWQL 459
76801904  380 LRTELDIDNrg--tSFFLLPSLAERFKALSLVTGAAAIFAVAVMVFFRYRKPEVAAPMLLTAGSEVYILLGFAAAVGLPL 457
110668983 336 LPAKLDLTGddggtTSFISPSQGENFRTDSLLAGLVAVFAVSGVVFLRYRDARVALPMIVTALSEVLILLGFAAGIGYPL 415
55379774  337 LPAPLDFDSa---eSQTLSSALAQEFQQRSLLTGILAVIAVSLVVYLRYGRPEVALPMIVTALSEVFILLGFVAFVQYPL 413
257053750 330 LPAPLDFENa---nYQELEPALGQQFRTDSLITGIMAVLAVSGMIFFRYQDVRVALPMIVTAMSEVFVLLGFVALVQYPL 406
257387377 361 LPAPLDFQNa---qTTSLEPALADQFKTNSLITGIIAVLAVSIAVYLRYGDPRVAVPMIVTALSEVLLLLGFVSAIQFPL 437
284164035 357 LPAPLDFGEa---qTYSLSPALADQFKLYSLVIGALAVITVSGVVFLRYRNPRVAAPMIVTAMSEVIILLGFAALIRMPL 433
289582359 369 LTAPLDFDRq---qTFSVEPALADQFKTYSLLIGILSVLTVSGMVFLRYRNPRVAAPMVLTAMSEVLILLGFAAMIRMPL 445
292656105 340 LPARLDLSGedsgtSSYISPSQGESFKFDSLITGIVAVLAVAGVVFIRYGKPQVALPMIVTGLSEVYILLGFAAAIGYPL 419
300710294 339 TPAPLDIESg---tQYYLEPSLADDFKLYSLVTGLISVVAVSGVVAARYGRPRIAGPMILTAAAEVFLLLGFAAAVGYPL 415
91773924  460 DLAAIAGIIAAIGTGIDHLVIITDEVLYEGKLPSTKVYMERITKAFAIIFAAAATTMIAMSPLVIMGFGALRGFAITTIV 539
76801904  458 DLSHIAGFIAVIGTGVDDLVIIADEIMQQGDVSTSKVFESRFKKAFWVIGAAAATTILAMSPLAVLSLGDLQGFAIITIV 537
110668983 416 DLSVIAGFITVIGTGVDDLVIIADEVLAEGGVSSRRVFQSRFRRAFWVIGAAAATTIIAMSPLAILSLGDLQGFAIFTIL 495
55379774  414 NLSHLAGFIAVIGTGVDDLIIIADEILQQGKVETGRVFQSRFRKAFWVIGAAAATTIVAMSPLMVLSLGDLSGFAIITIV 493
257053750 407 NLSHIAGFIAVIGTGADDLIIIADEILQREEIATDRVFQNRFRKAFWVIGAAAATTIIAMSPLTVLGLGDLSGFAIITIV 486
257387377 438 DLSHIAGFIAVIGTGVDDLIIIADEILQREGVATGRVFQNRFRKAFWVIGAAAATTIIAMSPLTVLGLGDLTGFAIITIV 517
284164035 434 DLSHVAGFIAVVGTGVDDLVIIADEVMDQGDVSSRRVFESRFRKAFWVIGAAAATTVIAMSPLAVLSLGDLRGFAIITIL 513
289582359 446 DLSHVAGFIAVVGTGVDDLVIIADEVMDDGEVSSQRVFESRFRKAFWVIGAAAATTIIAMSPLAVMSLGDLRGFAIITIL 525
292656105 420 DLSVIAGFIAVIGTGVDDLIIIADEVMGEGSVKSRKVFQSRFRRAFWVIGAAAATTIIAMSPLAVLSLGDLQGFAIFTIL 499
300710294 416 DLAAIAGFIAVVGTGVDDLIIIADEILQEGDVSTSRVFESRFRKAFWVIGAAAATTIVAMSPLAFLSLGDLTGFALFTIV 495
91773924  540 GVLIGVLIARPVYGKVIKVVLDKA 563
76801904  538 GVLIGVLITRPAYGDILRILVLED 561
110668983 496 GVLVGVLITRPAYGDILRALTTGN 519
55379774  494 GVLVGVLVTRPAYGDILRSLVLDE 517
257053750 487 GVLIGVLVTRPAYGNFLRRLVLDT 510
257387377 518 GVLIGVLITRPAYGDILRRLVLDE 541
284164035 514 GVLVGVLITRPAYGDILQRLLTDK 537
289582359 526 GVLIGVLVTRPAYGNILQRLLTDK 549
292656105 500 GVIVGVLVTRPAYGDILRLLLTED 523
300710294 496 GVLIGVLVTRPAYGDVLRVLLRLD 519
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