Conserved Protein Domain Family
PRK08311

?
PRK08311: PRK08311 
RNA polymerase sigma factor SigI
Links
?
Statistics
?
PSSM-Id: 236233
Aligned: 73 rows
Threshold Bit Score: 235.535
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
188585298   1 MEKKDIQLLQKAQSGDEQsRELLITSYTSYIQEIASGYCNRKLVwENDDELSIALLALNEAIDSYDLNSNKKFKNYLRMV 80 
150016699   1 ---MLECVLIDLNVDKNTsINELIENHMPFIIKSISDVTGRYVScENDEELSVGLLGFHEAIERYDNEKG-HFLSFAKLV 76 
187935172   1 ---MLECVLEDLNIGQDLdVNQLIEQHMPFIIKSISDVTGKYVScENDEELSIALLAFCEAVERYEKDKG-YFLPFAKLV 76 
167038510   1 --MDINDRVYAAKKDPSE-REKLIQEYTPFVIKQLSLFTNRYIDeRNSDELSIGLIAFNEAIDSFDNTKG-PFLSFSSLL 76 
125975455  13 EKDSFLEIIRRIKDGDNLlRNKFIDDFKPFILKCVSQLVGKKNDlTQSDEYSIALIAFNEAIESYDLDKKTKFVSFSKQV 92 
297543657   1 --MDIHARVYAAKKDPSE-REKLIQEYTPFIIKQLSSFTNRYIDeRNSDELSIGLIAFNEAIDSFDNTKG-SFLSFSSML 76 
158321693  10 KQETLEQRVKHIQAGDEEdKNRLIQEYIPFIKKVISNHIGAYVDvENHDAFSAGLMAFNEAIEKYQEHKG-NFLTFASLV 88 
167038747   1 --MDINDRVYAAKKDPSE-REKLIQEYTPFVIKQLSLFTNRYIDeRNSNELSIGLIAFNEAIDSFDNTKG-PFLSFSSLL 76 
289577370   1 --MDIHARVYAAKKDPSE-REKLIQEYTPFIIKQLSSFTNRYIDeRNSDELSIGLIAFNEAIDSFDNTKG-SFLSFSSML 76 
188589295   1 ---MLECVLEDLNIGQDLdVNQLIEKHMPFIIKSISDVTGKYVScENDEELSIALLAFCEAVERYEKDKG-YFLPFAKLV 76 
188585298  81 VKSRLVDYFRTEKR-HHHLPlsnnleesntELDEPPDNKIEDEAAWKQ--YHQQKEFQERVEEMSQFEYVLQEYGLSFHD 157
150016699  77 IGSRIKNYLKGENKhNHSSL----------------DELVDKGLDFRDeyFEPKEDNSMLLEEITALKNEISSFGFTLED 140
187935172  77 ISSRIKNYLKSQNKhSCSSL------------EELVEKGIEIQ---DE--YLEEEDNGLLVDDINILKSEIMLYGFTFED 139
167038510  77 IKRRLIDFLRQNQQ-NTIPL-----------------------ELYVE--KGTDYEAENRKLEMISFVNLLSLYNITLDD 130
125975455  93 IKRRLIDYLRSTKK-NNVAVpfsyfndcnsSFNDSSTGNFEEKFLYDR--NSDYSIDFEAREEIKNLELKICEYKMTIED 169
297543657  77 IRRRLIDFLRQNQQ-----------------------NTIPLELYVEK---VTDYEAENRKLEMISFVNLLSIYNITLDD 130
158321693  89 IKSRLIDAHRKASKtSKEVFv--------sQLENDLETTAEHIMAVDG--FESELE---MKLDLRELIRSMEAFGVSLEN 155
167038747  77 IKRRLIDFLRQNQQ-NTIPL-----------------------ELYVE--KGTDYEAENRKLEMISFVNLLSLYNITLDD 130
289577370  77 IRRRLIDFLRQNRQ-NTIPL-----------------------ELYVE--KVTDYEAENRKLEMISFVNLLSIYNITLDD 130
188589295  77 ISSRIKNYLKSQNKhSCSSL------------DELVEKGIEIQ---DE--YLEEEDNGLLVDDINILKSEIMLYGFTFED 139
188585298 158 LEQASPKHQKTRDKLVEVAKLIAEREDLLKYIKKKKKLPLKKLILETGNSKKVLKRGRKYILAVTMIIsDERFSYLRSLF 237
150016699 141 LVNEAPKQQATRKNAINLSEEISKDEEFLSFMYLKKRLPIKRIVLKFSVTEKVIKRSKKFIISVVIII-DKNLSALKNWI 219
187935172 140 LVEEAPKQRATRENAMNLAKQISEVEELTTFMEIKKRLPIKKIVLRFSVTEKVVKRSKKFIISVVIIF-KKNLKTLKNWI 218
167038510 131 LVKQSPKHSDTRKIATKIAYTICKNEKLLEYLKNRKNLPIKDLISILKVSRKTIEKHRKYIIALVIII-SEDLPLLKQYI 209
125975455 170 LIECSPKHRDTIILCLNVANIIIEDESLYQMFNKRKTLPYKELTERFNLCRRTLEKNRKFITAMVLIL-KSDLEVLKKYI 248
297543657 131 LVKQSPKHSDTRKITTKIAYTICKNNKLLEYLKNKKNLPIKDLISILKVSRKTIEKHRKYIIALVIII-SEDLPLLKQYI 209
158321693 156 LVDEAPKHEDTRKMAIKIARYIVEHKELCNKVLNTKNLPTKDIMENLKVSKKVIQRSRKFIIAVILIL-ESDLDTLKRYI 234
167038747 131 LVKQSPKHSDTRKIATKIAYTICKNEKLLEYLKNRKNLPIKDLISILKVSRKTIEKHRKYIIALVIII-SEDLPLLKQYI 209
289577370 131 LVKQSPKHSDTRKITTKIAYTICKNNKLLEYLKNKKNLPIKDLISILKVSRKTIEKHRKYIIALVIII-SEDLPLLKQYI 209
188589295 140 LVEEAPKQRATRENAINLAKQISEVEELTNFMEIKKRLPIKKIVLRFSVTEKVVKRSKKFIISVVIIF-KKDLKTLKNWI 218
188585298 238 SLPNKSS 244
150016699 220 RK----- 221
187935172 219 RK----- 220
167038510 210 SPESEVA 216
125975455 249 YDTLGR- 254
297543657 210 SPESEVE 216
158321693 235 LNAEGRE 241
167038747 210 SPESEVA 216
289577370 210 SPESEVE 216
188589295 219 RK----- 220
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap