Conserved Protein Domain Family
PRK08301

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PRK08301: PRK08301 
RNA polymerase sporulation sigma factor SigE
Links
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Statistics
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PSSM-Id: 236228
Aligned: 102 rows
Threshold Bit Score: 385.748
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
238924602   1 MKLFLVIKRVWKILwgnkPHTNEVFYIGGTEVLPPPLETDEEKCCLIALVdkNvamSK--EQAKKQLIEHNLRLVVYLAK 78 
114566372   8 RNWRLYFIKLYLKK----KLPRFIHYIGSTEVLPAPLREQEEMALISQLD--Q---GI--MSVKATLIEHNLRLVVYIAK 76 
302386724  13 FKAIPTFKTLMMPN------QGEIHYIGGADILPPPLDNEKEAQIIALLGs-D---DD--QRAKSELIEHNLRLVVYIAK 80 
160880601  13 FRMIPSFRELFLKK------KGEIHYIGGAEVLPAPLDAKREADAIMKLG--Tp--DD--VEAKSLLVEHNLRLVVYIAK 80 
238916673  17 FKVMPSIKNFCL------LKQGDVHYIGGTDILPAPLGASEEQDAIEALG------TAsdAEAKHTLIEHNLRLVVYIAK 84 
304317194   9 ITVQLAVIKILTKLk----IRESIFYVGGSEALPPPLSTEEEIFLIAKME--S---GD--NAAKSMLIERNLRLVVYIAK 77 
146295966  11 NYVLELFKKLGFQLs--dSQITELFYIGGCETLPPPLTPEEESEILNKIHy-E---RR--EELKKVLVERNLRLVVYIAR 82 
222528793   9 QYVLKIFKKLGFKLs--kNQIMEIFYIGGCDTLPPPLTPDEEAQILYKIHy-Q---GK--EELKKLLVERNLRLVVYIAR 80 
302871379   9 QYVLKILEKLGFKLs--qNQIMEIFYIGGCDTLPPPLTPDEEAQILYRIHy-Q---GE--EGLKKLLIERNLRLVVYIAR 80 
297616993  10 GILRVWTAKVIARR-----LAGYVYYVGSTEILPPPLSSEEESTLLQRLE--Q---GD--NGVKSTLIEHNLRLVVYIAK 77 
238924602  79 KFENTGVCVEDLISIGTIGLIKGINTFNPEKKIKLATYASRCIENEILMYLRRNNRVKLEVSFDEPLNTDWDGNELLLSD 158
114566372  77 KFENTGINIEDLVSIGTIGLIKAVNTFEPKKNIKLATYASRCIENEILMYLRRNIKNRVEISLDEPLNVDWDGNELLLSD 156
302386724  81 KFDNTSVGVEDLISIGTIGLIKAINTFNPNKNIKLATYASRCIENEILMYLRRNNKTKMEVSIDEPLNVDWDGNELLLSD 160
160880601  81 KFDNTGVGVEDLISIGTIGLIKAINTFNPDKNIKLATYASRCIENEILMYLRRNSKTKLEVSIDEPLNVDWDGNELLLSD 160
238916673  85 KFDNTGVGVEDLISIGTIGLIKAINSYDKDKNIKLATYASRCIENEILMYLRRNSKIKAEVSIDEPLNVDWDGNELLLSD 164
304317194  78 KFENTGVGIEDLISIGTIGLIKAINTFNPHKKIKLATYASRCIENEILMYLRRNSKTRMEVSFDEPLNIDWDGNELLLSD 157
146295966  83 KFENTKINLEDLVSIGTIGLIKAINTYNPDKNIKLATYASKCIENEILMFLRRNSHRKLELSIDEPLNVDWDGNELLLSD 162
222528793  81 RFENTKINLEDLVSIGTIGLIKAINTYNPNKNIKLATYASKCIENEILMFLRRNSNKKLELSIDEPLNVDWDGNELLLSD 160
302871379  81 RFENTKVNLEDLVSIGTIGLIKAINTYNPNKNIKLATYASKCIENEILMFLRRNSNKKLELSIDEPLNVDWDGNELLLSD 160
297616993  78 KFENTGINIEDLVSIGTIGLIKAVNTFEPRKNIKLATYASRCIENEILMYLRRNLKTRAEVSLDEPLNVDWDGNELLLSD 157
238924602 159 ILGTDEDVIYKDLETEVEISLLKKAMLSLNERERQIIELRFGVNRveNKELTQKEVADILGISQSYISRLEKKIMERLKK 238
114566372 157 VLGTENDMIYKQIEGEVEKSLLWKAMHKLNNREKTIIQLRFGLAD--GDEKTQKEVADILGISQSYISRLEKRILKRLQR 234
302386724 161 ILGTEEDVIYKDLETEVERNLLNTAISRLSPRERKIVELRFGLTDeeGEEMTQKEVADLLGISQSYISRLEKKIMKRLKK 240
160880601 161 ILGTEEDVIYKNIEDEVDKKLLGRALSKLNDREKIIVSLRFGLNTadGNERTQKEVADMLGISQSYISRLEKKIIKRLKK 240
238916673 165 IIGTDEDIIYRDIETEVECKMLKRAINQLPERERIIVDLRFGLSSedGEEKTQKEVADMLGISQSYISRLEKKIMRQLRK 244
304317194 158 ILGTDNEIVYKMIEDEVDKQLLKTALKKLSEREKRIIGLRFGLGG--GAEMTQKEVADMLGISQSYISRLEKRILKRLKK 235
146295966 163 VLGTDSEGVYSSIESSVEKEALLKAIQKLPKREKRIVELRFGFSD--EGEKTQKEVADMLGISQSYISRLEKKIITRLKK 240
222528793 161 VLGTDTEEIYNRIESSVEREALLRAIQKLPSREKKIVELRFGFGD--GGEKTQKEVADMLGISQSYISRLEKKIITRLKK 238
302871379 161 VLGTDTEEIYNRIESNVEKEALLQAIQKLPSREKKIVELRFGFGD--EGEKTQKEVADMLGISQSYISRLEKRLLQDSKK 238
297616993 158 VLGTDGDMIYKTIEEEVEKKLLSQAILRLPPREKRIIQLRFGLED--GYEKTQKEVADILGISQSYISRLEKRILKRLRR 235
238924602 239 EIQKMA 244
114566372 235 EIRKIE 240
302386724 241 EIVRFE 246
160880601 241 EMLRCE 246
238916673 245 EMVKSC 250
304317194 236 EINRLV 241
146295966 241 ELAKII 246
222528793 239 ELAKII 244
302871379 239 SWQRLY 244
297616993 236 EIRKIE 241
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