Conserved Protein Domain Family
ligB

?
PRK07636: ligB 
ATP-dependent DNA ligase; Reviewed
Links
?
Statistics
?
PSSM-Id: 236070
Aligned: 6 rows
Threshold Bit Score: 452.676
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
261404537   1 MFIDPMLLATAPVPFSDSRFIFEPKIDGHRLIFSQQNGVVRLYTRHNNDCTHQYPEIANALFPHD--IVLDGEIACVDSa 78 
16079109    1 MFVSPMLLHSIKEPFNDENYITELKFDGIRLILSKFDNQIKLYTRHNNEVTSKFPELMDLDIPDG--TVLDGEVIVAAS- 77 
52785303    1 MFIWPMLLESAKEPFNSDDYITETKFDGIRLIASRNNGLIRLYTRHNNEVTAKFPELLTLDIPDE--TILDGELIVPGS- 77 
52079930    1 MFIWPMLLESAKEPFNSDDYITETKFDGIRLIASRNNGLIRLYTRHNNEVTAKFPELLTLDIPDE--TILDGELIVPGS- 77 
56964573    4 IFISPMLLNRIDTP-TENNWLTELKFDGIRLIMSKHDGLTRLYTRHKTEVTNRFPELCNNDIADG--TILDGELIVLND- 79 
251795161   1 MFISPMQPTKAEEPFNSEEFLFEPKLNGHRLIVSFINGQVKMYTRNNNEVARQYPELFNVPVDSGvdVVFDGEVVRLRE- 79 
261404537  79 TGNPDFETVMTRFQAKKTDkiaalsvsKPVTFVIFDVLQNNGVDLRRLPLLKRKEILSSIPLPSNNFGIIPFIEGAGEAL 158
16079109   78 GGAPDFEAVMERFMSKKSA--------HNIVYCVFDVIYKDGQSIAAKPLTERKTVLNSLELDHPNVFVIEGTQGNGLAY 149
52785303   78 TGAGDFEAVMERFQSRKSF--------YPIVFCVFDVLRIEGVSVTSKPLSERKELLAGLKLDHPNVKIVEGVRGHATDY 149
52079930   78 TGAGDFEAVMERFQSRKSF--------YPIVFCVFDVLRIEGVSVTSKPLSERKELLAGLKLDHPNVKIVEGVRGHATDY 149
56964573   80 DGQPDFELVMSRFRSSKTTp------lLPVQFVVFDIIKHKHTCTTALPLIQRKEILSKVLRPHPHMTEIKWIEGQADAY 153
251795161  80 DGTNDFEELIQRYRIGKATkikdasrtHPVQYYVFDILYLNGKSLAHLPLVKRKEILARILKPSGYYHITMSIENEGRAL 159
261404537 159 FTQIEEREMERIVGKRKESIYETGRRSDNWRKIINWLYADVFIIGYRKEEFGWLaavptLDNAKMRPAGIIELgANPTHK 238
16079109  150 FNLAKEKNLEGIVIKKANSPYEINKRSHNWLKVINYDYTEVLITGYTKKDIKFL-----LSYPDGTSAGFMEF-MPHAER 223
52785303  150 FELVRENKIEGIVMKQANAPYAENKRSDRWLKIVNYEYTDVLISGLRKEDNALL-----LSYLDGQYAGIMEF-MPYDAR 223
52079930  150 FELVRENKIEGIVMKQANAPYAENKRSDRWLKIVNYEYTDVLISGLRKEDNALL-----LSYLDGQYAGIMEF-MPYDAR 223
56964573  154 FAAVKDRELEGIVIKNPTSTYKINKRSDDWLKVINYQYTQGLITGYRKDEFGLL-----LESFEGESWGVMEH-MELKQR 227
251795161 160 FKVMEDKGLEGIVAKKKNSKY-VSKRSENWLKVINYQYLEVSICAYRRKEFGWL-----IEH-EGRTVGCIEWtIPTDDR 232
261404537 239 KAFYnvVKPLVTGEDRNFVYVEPrIRARVKMRNWTRSGMLRTPVFERFII 288
16079109  224 TKFH--SMKQVKSESDEYVFIEP-ILCNVKHRFKTKHGKLRIPSFESWRV 270
52785303  224 RKFH--AERLIVEETEKYAYIEP-IGCRVKHRFKTKNGLLRIPSFHEWR- 269
52079930  224 RKFH--AERLIVEETEKYAYIEP-IGCRVKHRFKTKNGLLRIPSFHEWR- 269
56964573  228 KQFYqiAKMQNVTEGKQFVHLETpLPCRIRYRNLTRKGYLRIPTFVDWLI 277
251795161 233 KAFYkrAQSLVTGQDKHFVYVKPiLKVVVRFRDWTSNHMLRTPEYVGFSG 282
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap