Conserved Protein Domain Family
PRK07598

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PRK07598: PRK07598 
RNA polymerase sigma factor SigC; Validated
Statistics
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PSSM-Id: 236067
Aligned: 11 rows
Threshold Bit Score: 554.865
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
298490007   9 DTAYDSPRSnpk-----lepDLGIDDgdFSLDDLQDLDIAAAvDSHNLAANTNRRSTDLVRLYLQEIGRVRLLGRDEEVS 83 
86606677    1 MSNYEPELN-----------DILLDG--DLLDPAEEAEVDLA-ESEFAEEEPARRSTDLVRLYLQEIGRVPLLGRDEEVA 66 
86610159    1 MSNYEPELN-----------DILLDGpaDLLEAAEEAEVDLA-DGEFLEEEPTRRSTDLVRLYLQEIGRVPLLGRDEEVA 68 
81300658    9 STEYEAVSS-----------------------DVANLSETPS-SEAVETAVSSRQSTDLIRLYLQDIGRVRLLGRDEEVS 64 
56752254    9 STEYEAVSS-----------------------DVANLSETPS-SEAVETAVSSRQSTDLIRLYLQDIGRVRLLGRDEEVS 64 
16331621    1 --MTKPSNDeppltnvrdleAMLPLEeeDLTADSQDLEYTAV-------AHRQQFSTDLVRLYLQDIGRIPLLKRDEEVH 71 
75907387    9 DAAYNTQKSrqa-----ldpDIAIDDsdLSVDEIQELEIAAA-DPATFGASANRRSTDLVRLYLQEIGRVRLLGRDEEVS 82 
17229184    9 DAAYNTQKSrqa-----ldpDIAIDDsdLSVDEIQELEIAAA-DPATFGASANRRSTDLVRLYLQEIGRVRLLGRDEEVS 82 
186681474   9 DAPYNTKKSrqa-----ldsDLTVDEseLSVDDLQELEIASV-DNANFAASTNRRSTDLVRLYLQEIGRVRLLGRDEEVS 82 
37523331    1 --------mhivdidrmatpDELEGGpdPVLDPQTLEAFVQV-DITDERPARPGSSTDLVRVYLQEIGRVPLLGRDEEVE 71 
158335266  12 HAVYDGQGNsrdldqnsnepEEVEFDpnADLDDDASEDLAAL-KMTPISAANRRGTTDLVRLYLQEIGRVSLLERDEEVA 90 
298490007  84 EAQKVQRYLRlrivlanaakqgdtvivpyqrLIEVQERLSSELGHRPSLERWAKTAGidladlkptllegkrRWAEIAKL 163
86606677   67 LAQRVQDYMK---------------------LLDVRLRLQKELGREPTLAEWAARAN---------------QYPEWANL 110
86610159   69 LAQKVQDYMK---------------------LLDLRLRLQKELGRDPTLAEWVAKAN---------------QYPEWAQL 112
81300658   65 EARWVQRYMQllavrncvaveeggvlkdyvdLQEGRDRLTAQLGHRPSFEAWAKIVDcsltelrqalqlglhRWAEVCQL 144
56752254   65 EARWVQRYMQllavrncvaveeggvlkdyvdLQEGRDRLTAQLGHRPSFEAWAKIVDcsltelrqalqlglhRWAEVCQL 144
16331621   72 IAQQVQSYLRlveiqnraae-sdaaidqyqtAIAVHDQLLVQLGHRPSYERWAKILGqtvatlkqtlksgkkRWAELAGL 150
75907387   83 EAQKVQRYLKlrvvlanaakqgdevatpylhLIEVQERLASELGHRPSLERWAATAGinlcdlkpilsegkrRWAEIAKM 162
17229184   83 EAQKVQRYLKlrivlanavkqgdevatpylhLIEVQERLASELGHRPSLERWAATAGinlcdlkpilsegkrRWAEIAKM 162
186681474  83 EAQKVQRYLRmrivlanaaklgdeviipylrLVEVQERLTSELGHRPSLERWAATADivlsdlrptlangkrRWAEIAKL 162
37523331   72 LAQQVQKLMK---------------------LTALKESLQTSLGSEYSDEQWA----------------------EAAKV 108
158335266  91 EAQKVQRYMHlletreefle-shpviaeyarLTDVRDRLTAMLGHRPSFNRWAKEADipvadlkprlaegktAWAEKAEL 169
298490007 164 KVEELENVQSQGLQAKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 243
86606677  111 TPEKLQQIQRIGKRAKEHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVEKFDPKKGYRFSTYAYWWIRQGIT 190
86610159  113 TPEKLQQIQRIGKRAKEHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVEKFDPKKGYRFSTYAYWWIRQGIT 192
81300658  145 DLEELKQVCKEGQRAKDHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 224
56752254  145 DLEELKQVCKEGQRAKDHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 224
16331621  151 TVEELENIEKQGITAKAHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVEKFDPTKGYRFSTYSYWWIRQGIT 230
75907387  163 TVEELEKMQSQGLQSKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 242
17229184  163 TVEELEKMQSQGLQSKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 242
186681474 163 TVEELEQVQSQGLQAKEHMIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 242
37523331  109 GLFELKRQVLAGSRAKKKMIEANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 188
158335266 170 SNAELDQIVKQGIKAKEHMIQANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGIT 249
298490007 244 RAIATSSRTIRLPVHITEKLNKIKKAQRKISQEKGRTPTLEDLAIELDMTPTQVREVLLRVPRSVSLETKVGKDKDTELG 323
86606677  191 RAIATQSRTIRLPVHITEKLNKIKKAQRKLSQEKGRTPTIEDIASELEMTVPQVRELLVRVPRSVSLETKVGKDKDTELG 270
86610159  193 RAIATQSRTIRLPVHITEKLNKIKKAQRKLSQEKGRTPTIEDIASELEMTPPQVRELLVRVPRSVSLETKVGKDKDTELG 272
81300658  225 RAIATQSRTIRLPVHVTEKLNRIKKAQRKIAQTKGRTANLEEIAQELEMTPDQVREVLLRVPKSISLETRVGKEKDTELG 304
56752254  225 RAIATQSRTIRLPVHVTEKLNRIKKAQRKIAQTKGRTANLEEIAQELEMTPDQVREVLLRVPKSISLETRVGKEKDTELG 304
16331621  231 RAIATQSRMIRLPVHITEKLNKIKRAQRKISQEKGHTPKIDEVAEELGMTPEQVREVLTQVPRSVSLELKVGQDKDTELM 310
75907387  243 RAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLAIELDMTPTQVREVLLRVPRSVSLETKVGKDKDTELG 322
17229184  243 RAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLAIELDMTPTQVREVLLRVPRSVSLETKVGKDKDTELG 322
186681474 243 RAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLATELEMTPTQVREVLLRVPRSVSLETKVGKDKDTELG 322
37523331  189 RAIATQSRTIRLPVHITEKLNRIKKTQRKLSQNLGRTPTISEIAEELEMEPAHVRELMSRVPRSVSLETRVGKDKDTELG 268
158335266 250 RAIATQSRTIRLPVHITEKLNKIKKAQRKLSQSKGRTASIEDIAQEMDMTPEQIRELLVRVPRSVSLEIKVGKDKDTELG 329
298490007 324 ELLETDSITPEEMLMRESLQKDLHHLLADLTSRERDVILMRFGLSDGHPYSLAEIGRALDLSRERVRQIESKALQKLRQP 403
86606677  271 DLLETDDISPEETMMREALHRDLQQLLADLTSRERDVIRMRFGLGDGRTYSLAEIGRALDLSRERVRQIEAKALQKLRQP 350
86610159  273 DLLETDDISPEETMMREALHRDLQQLLSDLTSRERDVIRMRFGLGDGRTYSLAEIGRALDLSRERVRQIEAKALQKLRQP 352
81300658  305 DLLETTDFTPEERLTQESLSNDLQRLLLELNHRERDVIRMRFGLRDGQIYSLAEIGQVLDLSRERVRQIEAKALQKLRHP 384
56752254  305 DLLETTDFTPEERLTQESLSNDLQRLLLELNHRERDVIRMRFGLRDGQIYSLAEIGQVLDLSRERVRQIEAKALQKLRHP 384
16331621  311 DLLETDTQSPEDELMREALQNDMQEILLDLTPREQEVIALRFGFQDGVAHSLSEIGRILNLSRERVRQIEAKALQKLRHP 390
75907387  323 ELLETDGVTPEEMLMRESLQRDLQHLLADLTSRERDVILMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQP 402
17229184  323 ELLETDGVTPEEMLMRESLQRDLQHLLADLTSRERDVILMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQP 402
186681474 323 ELLETDCVTPEEMLMRESLQRDLHHLLSDLTSRERDVILMRFGLADGHPYSLAEIGRALDLSRERVRQIESKALQKLRQP 402
37523331  269 ELLEAEEVSPEESAVQESLRRDVKELLDDLTLRERDVITMRYGLLDGRTYSLSEIGRALDLSRERVRQIESKALQKLRQP 348
158335266 330 DLLETDDISPEELIMRESLQQELKQLLADLTPRERDVITMRFGLNDGKTHSLAQIGKSLDLSRERVRQIESKALQKLRQP 409
298490007 404 KRRNLIRDYLESLS 417
86606677  351 KRRNRVRDYLEAIS 364
86610159  353 KRRNRVRDYLEAIS 366
81300658  385 RRRNQIRDYLELLH 398
56752254  385 RRRNQIRDYLELLH 398
16331621  391 RRRDRIRDYYENLG 404
75907387  403 KRRNLIRDYLESLS 416
17229184  403 KRRNLIRDYLESLS 416
186681474 403 KRRNLIRDYLESLS 416
37523331  349 RRRAKVRDYLELME 362
158335266 410 KRRNRIRDFLEAFA 423
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