Conserved Protein Domain Family
PRK07408

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PRK07408: PRK07408 
RNA polymerase sigma factor SigF; Reviewed
Statistics
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PSSM-Id: 180965
Aligned: 33 rows
Threshold Bit Score: 383.116
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
158338094   1 MAYQTSLQSQTMELLVAYRQKPSVQLRNRLVRLNMGLVRKVAHRLTHQCAEPYEDLEQCGFLGLITAIERFDPSQGYAFS 80 
56752318   16 VVNQAALRTRGMELLVAYAETPSIALRNQIVQLNLGLVRKIAHRLSRQCSEPYEDLEQIGFMGLIRAIERFQPHQGCAFS 95 
298492777   2 AASESSVQYDGMELIHLYHQNPSIKLRNQLVEVHKGLVRKMAYKFIHQCNEPYEDLEQIGYLGLIRAIERFNPHQRYAFS 81 
75909293    2 AASESSMQTDGMELLRSYHHNPSIKLRNKLVQLHTGLVRKMAHKFSHQCNEPYEDLEQIGYFGLIRAIERFDPSQGYAFS 81 
17227773    2 AASESSMQTDGMELLRSYHHNPSIKLRNRLVQLHTGLVRKMAHKFSHQCNEPYEDLEQIGYFGLIRAIERFDPSQGYAFS 81 
186681796   2 ATSESSLRTDGIELLHLYHQNPSIKLRNKLVQLHTGLVRKMAHKFSHQCNEPYEDLEQIGYFGLIRAIERFDPSQGYAFS 81 
218245540   1 -MKTKYNNAQGMELLITYSRNPSLALRNQLVELHTGLVRQVAHRISNQCTEPYEDLEQIGYLGLINAIERFNPHQGCAFS 79 
172038499  27 NQSTKKKYIDSMELLSAYARNPSLELRNQLVERNLGLVRQVAHRISRQCSEPYEDLEQIGYLGLIRAIERFDPQQGCAFS 106
218439022   2 TTQSPSLGIQIMEVLIAYSRNPTLKLRNQLVELNAGLVRQVAHRISRQCCEPYEDLEQVGYLGLIRAIERFNPQQGSAFS 81 
257058577   1 -MKTKYNNAQGMELLITYSRNPSLALRNQLVELHTGLVRQVAHRISNQCTEPYEDLEQIGYLGLINAIERFNPHQGCAFS 79 
158338094  81 SFAVPYIRGEILHFLRDRANTVRIPRRWQQLSRDAAKARQALTMELGRQPNDQEIADALSLSMQEWRSVKLATTNRVPLS 160
56752318   96 SFAVPYIRGEILHFLRDSCHSIRIPRRWQELQRQGQQLREVLRHEWGRAPTEQELAFALNLSMTEWQEIHLARRNRMPMS 175
298492777  82 SFAIPYIRGEMLHFLRDHSTLLKIPRRWQELYNAGQKIRKQFTLSLGRPPREIDIATKLNISLQEWQECKLAVQNRIPLS 161
75909293   82 SFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKIRKELSISLGRPPKDAEIAKHLKVSVQEWQETKLAAQNRMPLS 161
17227773   82 SFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKVRKELSISLGRPPKDAEIAKYLKVSVQEWQETKLAAQNRMPLS 161
186681796  82 SFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKIRKDLAMSLGRQPKDAEIASELRVSVQEWQETKLAAQNRMPLS 161
218245540  80 SFAIPYIRGEMLHYLRDKGSVMRIPRRWQELYNKGKKVRKQLTTSLGRTPKDQELADALQVSLEEWHECELALQNRMLVS 159
172038499 107 SFAIPYIRGEMLHYLRDKGSVMRIPRRWQELYNKAKKIRKQLTVSLKRPPSDWEIADALGVPLEEWNECQLALQNRLLVS 186
218439022  82 SFAIPYIRGEILHYLRDRGSVMRIPRRWQDLYTKGKKLRKELAQTLGRQPRESEIAQALGISSQEWNECQLALQNRLLVS 161
257058577  80 SFAIPYIRGEMLHYLRDKGSVMRIPRRWQELYNKGKKVRKQLTTSLGRTPKDQELADALQVSLEEWHECELALQNRMLVS 159
158338094 161 LNARVssgHSQSDSAMTLGDTLMDVHSQILQANQEDRIELQQALNQLEDRTRIMIESVFFQQLSRQEVAKRIGVSSVTVT 240
56752318  176 LDATL---SQAGDSSVTLVETLPDTSQQWQQAALEERQQLVEAIGQLEEKARTAIESVYLRGLTRKEAAQQFGISPMTIT 252
298492777 162 LDATT---ANYVDYQITLGDILPCLRTALLQQQEEERLQLQGAISMLDDKRRIVVELVLVKELTRKDAAKKIGTSPMTVT 238
75909293  162 LDATA---VHYVDCQITLGEALPCPRTIAQQQQDEERQQLQGAISMLEEKPRQAVEMVFLKELSRKDAAKNIGTSPMTVT 238
17227773  162 LDATA---VHYVDCQITLGEALPCPRTIAQQQQDEERQQLQGAISMLEEKPRQAVEMVFLKELSRKDAAKNIGTSPMTVT 238
186681796 162 LDATA---VNYVDCQITLGEALPCPRSHVLLQQEEERQQLQGAINMLEEKPRMAVEMVFLKELSRKDAAKNIGTSPMTVT 238
218245540 160 LDSTI---NQNTDSTVSFGETLPDHRYQAKQSQEEDRLQLQRAMSQLEDKTKEAIECVFIKELPRKEAAKRIGMSPMTVT 236
172038499 187 LDATI---SHNVDCSISFGDTLPDQEYQAKQKLEEDRLQLQRALGQLEEKTKAAIECVFLHELPRKEAAKQIGISPMTVT 263
218439022 162 LDATV---NQAHDGMISFGDTLPDPKSQGQQKIQEDRLQLQKAMSQLEDKTKAAIECVFLWDLPRKEAAKRIGISPMTVT 238
257058577 160 LDSTI---NQNTDSTVSFGETLPDHRYQAKQSQEEDRLQLQRAMSQLEDKTKEAIECVFIKELPRKEAAKRIGMSPMTVT 236
158338094 241 RNMKKGIDKLIDLLqqqQPNAL 262
56752318  253 RRINRGVQKIAEHLdrmANEPL 274
298492777 239 RYLHKGVKDLICYL---QPQAE 257
75909293  239 RYLQKGIQDLICYL---QPQVM 257
17227773  239 RYLQKGIQDLICYL---QPQVM 257
186681796 239 RYLQKGIQDLICYL---QPQVM 257
218245540 237 RHLHKGIKQLIILL---ESQVA 255
172038499 264 RHLKKGIQQLGSLL---EPQVA 282
218439022 239 RHLQKGLDQLIALL---RPQAA 257
257058577 237 RHLHKGIKQLIILL---ESQVA 255
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