Conserved Protein Domain Family
PRK07405

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PRK07405: PRK07405 
RNA polymerase sigma factor SigD; Validated
Statistics
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PSSM-Id: 180963
Aligned: 17 rows
Threshold Bit Score: 544.354
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16330303    1 MTARTSP-DSVRAYLREIGRVPLLTHEEEIVYAKQIQQVVSLNEIKKSLAEGKDGEPvSPSEWAKAADLSIRELEKAIKE 79 
298490014  16 KTAQTAT-DLVRTYLREIGRVPLLTHEEEIHYGKQVQRCTTLYEVRENLATQLGYQP-TLEEWAASAQVEPVELNTAIAE 93 
75908113   16 KTAPTAT-DLVRTYLREIGRVPLLSHEEEIRYGKQVQRSTTLQEVREELATQLGREP-SIEEWAKAANINSADLLGAIAD 93 
17231302   16 KTAPTAT-DLVRTYLREIGRVPLLSHEEEIRYGKQVQRSTTLQEMREELATQSGREP-SVEEWAKAANLNPADLLEAIAD 93 
113477482   2 KIGKTSDiDSVCTYLREIGRVPLLSHEEEILYGKQVQRLTALQEFNQTLAEALGREP-TLLEWAEAKELSKSELQRIIRE 80 
81299483    3 KTETPTS-DLVRTYLREIGRVPLLTHEEEVVLGKRVQQWMKLQELRQTLQSEEGDRDpSDLEWAAAAGLSIEELRQQQHL 81 
220907092   2 KTAETSK-DLVRAYLREIGRVPLLTHEQEILYGKQVQQLAIVQQVREELSDRLGHEP-DLTEWATAAKLSEAELQGVVNR 79 
284929771   2 KLTKSNL-DPVRSYLREIGRVPLLTHEEEILYAKRVQRFVDLEKYRELFTKETGKEP-TETQWAQAARISRRELHSAIAS 79 
22297808    1 --MDTSK-DLVRTYLREIGRVPLLTHEQEVIYGKQVQQLAAMNEIREKLAAELNREP-TRAEWAAAANISEGELETIIEN 76 
158337052   2 RTKEIAK-DSVRSYLREIGRVPLLTHEEEVTFGKQVQHLIKLQTIRDELAEQLERQP-NDAEWSAAAKLSEAELQKALHE 79 
16330303   80 GERAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIR 159
298490014  94 GEIAKRRMVEANLRLVVSVAKKYIKRNIDLLDLIQEGSIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIR 173
75908113   94 GEVAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIR 173
17231302   94 GEIAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIR 173
113477482  81 GERAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIR 160
81299483   82 GEQAKRKMIEANLRLVVSVAKKYLKRNMDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIR 161
220907092  80 GELAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIR 159
284929771  80 GEAAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIR 159
22297808   77 GERAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIR 156
158337052  80 GEAAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIR 159
16330303  160 LPIHITEKLNKIKKAQRQLSQEKGRAASIAELAEHLELTPKQVREYLERSRHPLSLDLRVGDNQDTELGDLLEDDGPLPE 239
298490014 174 LPIHITEKLNKIKKAQRQLSQKLGRAPTAIELADELELTPRQVRECLEKARLPLSLDLRLGDNYDTELGEMLEDTGATPE 253
75908113  174 LPIHITEKLNKIKKAQRQLSQRLGRAPTAGELANELELTPKQVREYLEKARLPLSLDLRLGDNYDTELGEMLEDPGASPE 253
17231302  174 LPIHITEKLNKIKKAQRQLSQRLGRAPTAGELANELELTPKQVREYLEKARLPLSLDLRLGDNYDTELGEMLEDPGASPE 253
113477482 161 LPIHITEKLNKIKKVQRQLTQQLGRSATTGEIAEELGLTPKQIRECLERARLPLSLDLRVGDNQDTELGDLLEDTGASPE 240
81299483  162 LPIHITEKLNKIKKMQRQLSQQLGRTATLPELAAALDLTPAQVRDYLEKARHPLSLDLRVGDNQDTELGDLLETDCTTPE 241
220907092 160 LPIHITEKLNKIKKAQRQLSQQLGRAATIGELAQELELTPKQVREYLERSRQPLSLDVRVGDNQDTELGELLEDTAASPE 239
284929771 160 LPIHITEKLNKIKKAQRELSQARGRDATIAELAEELDLTPKQVREYLERARQPLSLDLRVGDNQDTELGDLLEDDGPSPE 239
22297808  157 LPIHITEKLNKIKKAQRQLSQRLGRAATINELAAELELTPAQVREYLERARQPLSLDVRVGDNQDTELGELLEDSSISPE 236
158337052 160 LPIHITEKLNKIKKTQRQLSQKLGRAATISELATSLDLTTKQVREYLERARQPLSLDVRVGDNQDTELGELIEDPSESPE 239
16330303  240 DFATYASLQLDLDSLMAELTPQQREVLILRFGLNDGQPLTLASIGSMLSISRERVRQIEREALNKLRKRKSMIQEYLAS 318
298490014 254 DFVIQSSLSSDIERLMKELTPQQKEVIKLRFGLIDGQALTLSKIGEILNISRERVRQIEREALTKLRKSKANINEYLAS 332
75908113  254 DFVMQSSLSNDLEVLMEQLTPQQKEVITLRFGLIDGQALTLARIGEILNISRERVRQIEREALTKLRKSKANMGEYLAS 332
17231302  254 DFVMQSSLSNDLEVLMEQLTPQQKEVITLRFGLIDGQALTLARIGEILNISRERVRQIEREALTKLRKSKANMGEYLAS 332
113477482 241 DYALQSSMRTDLESIMVDLTPQQKQVLALRFGLEDGQTMTLSKIGAHLNISRERVRQIEREALSKLRKRKQDMNDYLAS 319
81299483  242 EFTLQASMRRDIDRLLDQLTEQQRQVIALRYGLEDGQVMTLASIGDRLQISRERVRQLEREALHTLRQARSQVQEYLAS 320
220907092 240 DFTSQASLRADLDRLMADLTPQQRQVLSLRFGLEDGQPLTLAKVGDMLNISRERVRQIEREALSKLRKRKADIYEYLAS 318
284929771 240 DFATHSSLQFDLEILMEDLTTQQKEVIALRFGLTDGQPLTLAKIGCRLNISRERVRQIEREALSKLRKRKANIQEYLAS 318
22297808  237 EFATQSLLRSDLERLMAELTPQQRHVLSLRFGLENGQPLTLAKVGELLNISRERVRQIEREALSKLRKRRGDIHEYLAS 315
158337052 240 NFTLQASLRGDLERLMADLTDQQQQVLHLRFGLDDGQPLTLAKIGDRLSISRERVRQIEREALSKLRKRKADISEYLAS 318
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