Conserved Protein Domain Family
fliA

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PRK06986: fliA 
flagellar biosynthesis sigma factor; Validated
Statistics
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PSSM-Id: 235901
Aligned: 222 rows
Threshold Bit Score: 248.224
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
91776300    1 MYTLhgkTSPKEeLLKQHASLVKKIAYQLKAKLPASVDIDDLIQAGMMGLLDASNRYEDNHGAQFETYAAQRIRGSMIDE 80 
15611460   29 AYDKqqhHHQDA-LAIQYLPAVRAMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDY 107
208434361  21 AYDKqqhHHQDD-LAIQYLPAVRAMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDY 99 
254779107  29 AYDKqqhHHQDA-LAIQYLPAVRAMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDY 107
298736645  29 AYDEqqhHHQDA-LAIQYLPAVRAMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDY 107
109947668  32 AYDKqqhHHQDA-LAIQYLPAVRAMAFRLKEHLPGSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDY 110
291277483   5 AYNQnlkYSQDE-LAIQYLPAVRAMAYRMKERLPSSVDVNDLISIGTEELIKLARKYDSKLNDSFWGYAKTRVNGALLDY 83 
161546627   9 GYNQtlkYAQDE-LALQYLPAVKAMAFRLKERLPSSIEMADLVSIGTEELIKLARRYDSSLNDSFWGFAKTRVNGAMLDY 87 
34557955    9 GYSQhlkYSQDE-LAVSYLPAVKAMAYRLKERLPSSIDTADLVSIGAEELIKLSRRYNEALNDSFWGFAKTRVQGAMLDY 87 
78776905    4 AYTQdlkHKEDE-LAIQYLPAVKAMAFRLKERLPSSVDYMDLSAIGTEELIKLARRYDESLNDSFWGYAKKRVYGAMLDY 82 
91776300   81 LRRADWLPRSVRKNMRDVESAVHLLEQKLGRPPTEGELARELNLSMDDFQGMLDDCSGHQLIYYEDFs-eQDSGDHFldr 159
15611460  108 LRSLDVISRSSRKLIKSIDIEITKYLNEHGKEPSDEHLAEALGENIEKIREAKTASDIYALVPIDEQf-nAIEQDEI--- 183
208434361 100 LRSLDVISRSNRKLIKSIDAEITKHLNEHGKEPSDAYLAEALGENIEKIREAKTASDIYALVPIDEQf-nAIEQDEI--- 175
254779107 108 LRSLDVISRSNRKLIKSIDAEITKHLNEHGKEPSDAYLAQTLGENIEKIREAKTASDIYALVPIDEQfnai-eqdEI--- 183
298736645 108 LRSLDVISRSNRKLIKSIDIEITKHLNEHGKEPSDAYLAEALGENIEKIKEAKTASDIYALVPIDEQf-nAIEQDEI--- 183
109947668 111 LRSLDVVSRSSRKLIKSIDFETTKYLNEHGKEPSDEYLAQALGENIEKIREAKTASDIYALVPIDEQfnaIEQD-EI--- 186
291277483  84 LRSLDIISRANRKLIKSIDQEITRYYNQHQEEPSDAYLAQVLGEDEEKIREARIASDIYLLVPIDEQy-nAIESDDI--- 159
161546627  88 LRSLDVLSRANRKLVKSIDYEVSKYFNEHQEEPSDEYLAKVLKEDIAKIKEARMASDIYALVPIDEQy-nAICAENI--- 163
34557955   88 LRSLDVVSRGNRKLIKQIDVEISHYMNEHSSEPSDEYLAEVLGEDIKKIREAKIASDIYVLMPIEDQl-sALHEEAT--- 163
78776905   83 LRSLDIVSRASRKLIKAIDYAIEEHRAIHDEEPSDEELALIIGEDIEKIHEARIASSIYAVMPLHDQl-qVGDEGAS--- 158
91776300  160 yqsddsgdpLKALLSSDFREALIEAIEALPEREKILMGLYYEQEMNLKDIGAIMSVSESRVCQLHTQAVARLRAKLKEKL 239
15611460  184 ---------TQKIEAEELLEHIQKVLNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRQSLGVNH 254
208434361 176 ---------TKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRKSLGVDH 246
254779107 184 ---------TKKIEAEELLEHVKKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRKSLGVDH 254
298736645 184 ---------TKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRKSLGVDH 254
109947668 187 ---------TKKIEVEELLEHVQKVLNQMSEREQMLIQLYYFEELNLSEIKEILGITESRISQIIKEAIKKVRQSLGASH 257
291277483 160 ---------VEKLEKEELVQKIKKILSGLSQREQMIMQMYFFEEMNLNEIKEVLDITESRISQITKEVIKKIRKVIGENH 230
161546627 164 ---------LEDVQKDELMEIIFNVLKKLGKREQMIIQLYYFEELSLKEISEILDITESRISQITKEIVKKIRQALGDIN 234
34557955  164 ---------EGRIEQEELVGIISEILESLSEREQLIIQLYYFEELNLKEISEVLEITESRISQIHKEVIKKIRERLGGAH 234
78776905  159 ---------LANIEKEELIDVIKTVLGLYSEREQMIIQLYYFEELSLKEISDVLGITESRISQIHKSVIHKIKESVGA-- 227
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