Conserved Protein Domain Family
PRK06704

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PRK06704: PRK06704 
RNA polymerase subunit sigma-70
Statistics
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PSSM-Id: 180663
Aligned: 20 rows
Threshold Bit Score: 434.068
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
52142720    1 MCTKVTHIFKNHIDMNHSNINFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYSNKDICMTLVYKIARNRWLDQ 80 
42781877    1 MCTKVTHILKNHIDMNHSNINFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYSNKDICMTLVYKIARNRWLDQ 80 
30020915    1 MCTKVTHVLKNHIDMNHSNINFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYRNKDICMTLVYKIARNRWLDQ 80 
163940540   1 --------------MNHSNINFLIKHYAEVKRYCTFLTKNKWDGEDLAQEAICKVLQKYSEKEICITLLYKIARNQWLDQ 66 
218234396   1 MCTKVTHVLKNHIDMNHSNINFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYRNKDICMTLVYKIARNRWLDQ 80 
217960231   1 MCTKVTHILKNHIDMNHSNITFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYSNKDICMTLVYKIARNRWLDQ 80 
218897813   1 MCTKVTHVLKNHIDMNHSNINFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYRNKDICMTLVYKIARNRWLDQ 80 
222096292   1 MCTKVTHILKNHIDMNHSNINFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYRNKDICMALVYKIARNRWLDQ 80 
229604408   1 MCTKVTHILKNHIDMNHSNITFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYSNKDICITLVYKIARNRWLDQ 80 
227814399   1 MCTKVTHILKNHIDMNHSNITFLIEQYGELKRYCTFLTKNKWDGEDLAQETVCKVLQKYSNKDICITLVYKIARNRWLDQ 80 
52142720   81 MKSKSVHEKIKEQITFEEPQENIADLHEMVGKVLSSLNVQQSTILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
42781877   81 MKSKSVHEKIREQITFEEPQENIADLHEMVGKVLSSLNVQQSTILLLKDVFQYSIVDIAKVCSVSEGAVKASLFRSRNRL 160
30020915   81 IKSKSVHEKIREQITFEEPHENIADLHEMVGKVLSSLNVQQSAILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
163940540  67 MKSKSVQEKLEQQNTFEEPHGKIADLHEMVGKVLSSLNVQQSVILLLKDVFQYSIADIAKICSVSEGAVKASLFRSRNRL 146
218234396  81 MKSKSVHEKIREQITFEEPHENIADLHEMVGKVLSSLNVQQSAILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
217960231  81 IKSKSVHEKIRDQITFEEAHEKIADLHEMVGKVLSSLNVQQSTILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
218897813  81 MKSKSVHEKIREQITVEEPHENIADLHEMVGKVLSSLNVQQSAILLLKDVFQYSIADIAKLCSVSEGAVKASLFRSRNRL 160
222096292  81 MKSKSVHEKIREQITFEEPQENIADLHEMVGKVLSSLTVQQSTILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
229604408  81 IKSKSVHEKIRDQITFEEPHEKIADLHEMVGKVLSSLNVQQSAILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
227814399  81 IKSKSVHEKIRDQITFEEPHEKIADLHEMVGKVLSSLNVQQSAILLLKDVFQYSIADIAKVCSVSEGAVKASLFRSRNRL 160
52142720  161 KTVSEEGIEIVEFTDDMEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLVFNVKKPSSYSCMLCAA 228
42781877  161 KTVSEEGIEIVEFTDDMEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKQSSSYSCMLCAA 228
30020915  161 KTVSEEGIEIVEFTEDIEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKNPSSYSCMLCAA 228
163940540 147 KTVNEEGIEIVEYTDDVEIVVTSIREERPELLTKLLPTIDFTKLPSIQPVLFFSMKQSSSYSCMLNAA 214
218234396 161 KTVSEEGIEIVEFTEDIEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKNPSSYSCMLCVA 228
217960231 161 KTVSEEGIEIVEFTDDMEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKQPSSYSCMLLAA 228
218897813 161 KTVSEEGIEIVEFTEDIEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFSVKEPSSYSCMLCVA 228
222096292 161 KTVSEEGIEIVEFTDDMEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKQSSSYSCMLCAA 228
229604408 161 KTVSEEGIEIVEFTDDMEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKQPSSYSCMLCVA 228
227814399 161 KTVSEEGIEIVEFTDDMEVVVTSIREERPELLTKLLPTIDFTKLPSKQPVLLFNVKQPSSYSCMLCVA 228
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