Conserved Protein Domain Family
PRK06288

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PRK06288: PRK06288 
RNA polymerase sigma factor WhiG; Reviewed
Links
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Statistics
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PSSM-Id: 235770
Aligned: 20 rows
Threshold Bit Score: 428.337
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
300871802   7 GIIPNITDDNEQEYWIEYKKTLSPHIKEALVIKYSNLVKYVANQINFNMkaTRDIEFDDLVGYGALGLIDAIEKYDPNKE 86 
189025934   1 MGNTAFEQQSEEELWLEYRRTRSAKIREYFVVQYAPLVKYVASKIAVGK--PGNVEFDDLVSYGIFGLFDAIDKYDPEKN 78 
42528183    1 MANTDYENIPEEELWDKYKKTSDPKIREYFILKYAPLVKYVAGKVGIGM--PTNVEFDDLVGYGVFGLLDAIEKYDLDKN 78 
284992377  10 DETPEDADAALAELWAGYVADRAPELRDRLILHYAPLVKYVAGRVGSGL--PAHVEQADLVSYGTFGLIDAITRYQPSRE 87 
21223976   21 GSVRPPAPSTLDELWRSYKTTGDERLREQLILHYSPLVKYVAGRVSVGL--PPNVEQADFVSSGVFGLIDAIEKFDVDRE 98 
290957086   1 --MRPPAPSTLDELWRTYKTSGDERLREQLILHYSPLVKYVAGRVSVGL--PANVEQADFVSSGVFGLIDAIEKFDIDRE 76 
182435659  19 GTVRPPAPSSLDELWRSYKTTGDERLREQLILHYSPLVKYVAGRVSVGL--PSNVEQADFVSSGVFGLIDAIEKFDIERA 96 
29829172   21 GSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKYVAGRVSVGL--PPNVEQADFVSSGVFGLIDAIEKFDIGRE 98 
225619299  12 DKIPNITNENEQEYWLEFKKTLSPYIREALIIKYSPLVKYVASKISVNMgsHKHIEFQDLVGFGSFGLMDAIDKYNPNRD 91 
296125231   9 GKIPNITNDNEQEYWQEFKNTQSPYIREALIIKYSPLVKYVASKISVNMgsHKHIEFQDLVGFGSFGLMDAIDKYNPNRD 88 
300871802  87 VKFKTYATTRIKGSIYDELRKIDKLPRSIRREIKDIEIAREFLESKLGRNVNSQEIADTMGIPLSKINETMRYSIEASTT 166
189025934  79 IRFNTYAVTRIRGAIFDELRSIDWVPRSVRQQTRQIEEAIADLEARLGRXATDTEIACALNIELEEYHQLLLKVSGTSVI 158
42528183   79 VKFNTYAVNRIRGAIFDELRSIDWVPRSVRQKSREIEETIADLEARLGRSASNEEIAYAMGLDIEEYNSLLLKISATSVI 158
284992377  88 VKFESYAMARIRGAIIDELRSTDWIPRSVRMKARQFERTVALLESRLQRSPSEEEVAAEMDMDVEDVRKFLGQLSLVNVV 167
21223976   99 IKFETYAITRIRGAMIDELRALDWIPRSVRQKARNVERAYATLEARLRRTPSESEVAVEMGIAVEDLHAVFSQLSLANVV 178
290957086  77 IKFETYAITRIRGAMIDELRALDWIPRSVRQKARNVERAYATLESRLRRTPSEGEVAAEMGIAVDELHAVFSQLSLANVV 156
182435659  97 IKFETYAITRIRGAMIDELRALDWIPRSVRQKARNVERAYATLEAQFRRTPSEAEVASEMGIALEELHAVFSQLSLANVV 176
29829172   99 IKFETYAITRIRGAMIDELRALDWIPRSVRQKARNVERAYATLEARLRRTPTEGEVATEMGIAVDELHSVFSQLSLANVV 178
225619299  92 IKFKTYAVTRIRGAIYDELRKLDYLPRSIRKDVKEIEKAREILEARLSRNIKPQEIADMLGIPISKYNETMKRYIEASPT 171
296125231  89 IKFKTYAVTRIRGAIYDELRKLDYLPRSIRKDVKEIEKAREILEARLSRNIKPQEIADMLGIPISKYNETMKRYIEASPT 168
300871802 167 SLSEVWY-HGDDSDEISIMDTLKASDKNNPEYLAERKDVQKKIVEALDKLPEKERSVLILYYYEDLTLKEIGKVLDVSES 245
189025934 159 SLADSKF-GGDERDHVSVGDSIEAPASLNPDVIVEREEIKRIIAEAIRELSQREQQVLILYYYEEMTLKEIGKVLKVTES 237
42528183  159 SLTDLRF-SNDDSEEFSVGDIIEAPSSLNPDVIVEREDIKRVIVEAIKELPDREKKVLIMYYYEDMTLREIGEVLHVTES 237
284992377 168 ALDELL--SDDEGGAPRLVDTLQDTSALDPQAMAEHSEARQLLARAVEQLPEREKVVVSLYYFEGLTLADIGRVLGVTES 245
21223976  179 ALEELLHaGGEGGGRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYEGLTLAEIGNVLGVTES 258
290957086 157 ALEELLHaGGEGGDRLSLMDTLEDTAADDPVEVAEDRELRRFLARAINTLPEREKTVVTLYYYEGLTLAEIGNVLGVTES 236
182435659 177 ALEELLHvGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPDREKTVVTLYYYEGLTLAEIGNVLGVTES 256
29829172  179 ALEELLHvGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPDREKTVVTLYYYEGLTLAEIGNVLGVTES 258
225619299 172 SLSDVWY-VGDDSDEISVIDTLKSNDKTNPEYLAEREDVKNKIIAALKKLPEKEQQVLILYYYDDLTLKEIGKVLEVSES 250
296125231 169 SLSDVWY-VGDDSDEISVIDTLKSNDKTNPEYLAEREDVKNKIVAALKKLPEKEKQVLILYYYDDLTLKEIGKVLEVSES 247
300871802 246 RVSQLHTKAVQQLRYSLSEIKKQLL 270
189025934 238 RISQIHTSANLKLKAKLTNIKKGIR 262
42528183  238 RVSQIHTSANIKLRAKLSNVTKGIK 262
284992377 246 RICQLHTKAVLHLRTKLADIA---- 266
21223976  259 RVSQIHTKSVLQLRAKLAGFGR--- 280
290957086 237 RVSQIHTKSVLQLRAKLASFGR--- 258
182435659 257 RVSQIHTKSVLQLRAKLADAGR--- 278
29829172  259 RVSQIHTKSVLQLRAKLASFGR--- 280
225619299 251 RISQLHTKAIQQLRYSLSEIKKQLL 275
296125231 248 RISQLHTKAIQQLRYSLSEIKKQLL 272
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