Conserved Protein Domain Family
PRK05054

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PRK05054: PRK05054 
exoribonuclease II; Provisional
Statistics
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PSSM-Id: 179920
Aligned: 138 rows
Threshold Bit Score: 957.405
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
52425523    1 MFQNNPLLSQLKQQLHDSKPHVEGVVKGTDKAYGFLETEK--ETFFIAPPAMKKVMHGDKIKAAIETIGDKKQAEPEELI 78 
218676897   1 MFQDNPLLAQLKQQIQETLPKKEGTIKATEKGFGFLEVDSk-TSFFIPPPYMKKCVHGDKVIAIIRTEKEREVAEPEELI 79 
28900462    1 MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSk-TSFFIPPAYMKKCIHGDKVVAIIRTENEREVAEPQELI 79 
37676316   15 MFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSk-TSFFIPPAYMKKCMHGDKVIAIIRTENEREVAEPQELV 93 
27366602    1 MFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSk-TSFFIPPAYMKKCMHGDKVIAIIRTENEREVAEPQELV 79 
262396819   1 MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSk-TSFFIPPAYMKKCMHGDKVVAIIRTENEREVAEPQELL 79 
147671789   1 MFQDNPRLAQLKQKIQETLPKKEGTIKASDKGFGFLEVDSk-TSYFVPPPYMKKCMHGDKVVAFIRTENEREVAEPSELI 79 
227812371   1 MFQDNPLLAQLKQKIQETLPKKEGTIKASDKGFGFLEVDSk-TSYFVPPPYMKKCMHGDKVVAFIRTENEREVAEPSELI 79 
209809234   1 MFQDNPLLAQLKQQIQEKLPKKEGTIKATDRGFGFLESDDkkKSVFIPPAQMKKVMHGDRVIALIRTENDKDQAEPDQLV 80 
59713566    1 MFQDNPLLAQLKQQIQEKLPKKEGTIKATERGFGFLESDDkkKSIFIPPAQMKKVMHGDKVVALIRTENEKEQAEPDQLI 80 
52425523   79 EPMLTRFIAKVRFNkDKKLQVLVDHPNINQ-PIGAAQAKTVKQ-ELKEGDWVVATLKTHPLRDDRFFYAQIAEFICSAED 156
218676897  80 EQGLTRFIARVKLF-KGRLNVVPDHPQLKKlQLKAKAKKGLNPeTLKEGDWVVAHIVQHPLKGDNGFLAQISEKITDADD 158
28900462   80 EQSLTRFIGRVKMF-KGKLNVVPDHPQLKKlSLKAKLKKGLKPdNFAEGDWVVAHLVRHPLKGDNTFFVEISEKITDADD 158
37676316   94 EQMLNRFIGRVKMF-KGKLNVVPDHPQLKKmSLKAKTKKGLNPqEFAEGDWVVGHLIRHPLKDDNGFFVEISEKITDADD 172
27366602   80 EQMLNRFIGRVKMF-KGKLNVVPDHPQLKKmSLKAKTKKGLNPqEFAEGDWVVGHLIRHPLKDDNGFFVEISEKITDADD 158
262396819  80 EQAVTRFIGRVKMF-KGKLNVAPDHPQLKKlSLKAKLKKGLKPdEFAEGDWVVAHLIRHPLKGDNSFFVEISEKITDAND 158
147671789  80 EQSLTRFIGRVKLF-KGKLNVAPDHPQLKKlSLKAKTKKGLNEaDFQEGDWVVAHLVRHPLKGDDGFFVQISHKITDAND 158
227812371  80 EQSLTRFIGRVKLF-KGKLNVAPDHPQLKKlSLKAKTKKGLNEaDFQEGDWVVAHLVRHPLKGDDGFFVQISHKITDAND 158
209809234  81 EQSVTRFIGRIQMF-KKRLQVMPDHPSLKN-AIKAKTRKGVNPeTLNEGDWVVAELTQHPLKGDDGFLCDITHKITDTDD 158
59713566   81 EQSITRFIGRIQMF-KKRLQVMPDHPSLKN-AIKAKTRKGVNPeTLKEGDWVVAELTQHPLKGDQGFQCDITHKITDSDD 158
52425523  157 EFAPWWVTLARHEQSRYPVQgQEVYS-MLDTE-TRRDLTALHFVTIDSENTQDMDDALYIEPVtapndEQTGWKLAVAIA 234
218676897 159 KIAPWWVTLAQNDLPNSEPEgIDDWQiKDDADlERVDMTHVPFVTIDGESTKDMDDALYAKKK-----ENGDFELTIAIA 233
28900462  159 KIAPWWVTLAQNDLPNSEPAgIENWElKDDADlERIEMTHVPFVTIDGESTKDMDDALYAKKT-----ESGDFELTIAIA 233
37676316  173 KIAPWWVTLAENDLPNSEPAgIDDWQiKDDADlERIDMTHIPFVTIDGESTKDMDDALYAKKN-----DAGDFELTIAIA 247
27366602  159 KIAPWWVTLAENDLPNSEPAgIDDWQiKDDADlERIDMTHIPFVTIDGESTKDMDDALYAKKN-----DAGDFELTIAIA 233
262396819 159 KIAPWWVTLAQNDLPNSEPAgIENWElKDDADlERVDMTHVPFVTIDGESTKDMDDALYAKKT-----ESGDFELTIAIA 233
147671789 159 KIAPWWVTLAENDLPNSEPAgIDDWQlKDDADlVREDLTALPFVTIDGESTKDMDDALYAQQL-----PNGDFALTIAIA 233
227812371 159 KIAPWWVTLAENDLPNSEPAgIDDWQlKDDADlVREDLTALPFVTIDGESTKDMDDALYAQQL-----PNGDFALTIAIA 233
209809234 159 KIAPWWVTLAQNDLPNSEPKgIEHWEiKDDADlVRVDMTETPFVTIDGSSTKDMDDALYIKKQ-----DNGSFELTIAIA 233
59713566  159 KIAPWWVTLAQNDLPNSEPEgIEHWEiKDDADlVRVDMTATPFVTIDGESTKDMDDALYIKKL-----ENGSFELTIAIA 233
52425523  235 DPTAYIALDSQIEKDARKRCFTNYLPGFNIPMLPRELSDELCSLMENETRAALVCRLETDMQGEIVGE-PEFILAQVQSK 313
218676897 234 DPTAYISPDDAMDKVARERGFTIYLPGRNIPMLPRDLADNLCSLIENEVRPALCCTVTVSKDGVIGDD-INFFAANIKSH 312
28900462  234 DPTAYITPEDEMDKVARERGYTIYLPGRNIPMLPRDLADNLCSLIEGEIRPAICCTVTVSKDGVIGDD-IKFFAANIKSH 312
37676316  248 DPTAYITPDDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIEGEIRPALCCTVTVSKDGVIGDD-IQFFAANIKSH 326
27366602  234 DPTAYITPDDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIEGEIRPALCCTVTVSKDGVIGDD-IQFFAANIKSH 312
262396819 234 DPTAYITPEDEMDKVARERGYTIYLPGRNIPMLPRDLADNLCSLIEGEIRPAICCTVTVNKDGVIGDD-IKFFAANIKSH 312
147671789 234 DPTAYITPEDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGDD-IRFFAANIKSH 312
227812371 234 DPTAYITPEDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGDD-IRFFAANIKSH 312
209809234 234 DPTAYITPDDEMDKVARQRGYTIYLPGRNIPMLPRDLSDELCSLIENEQRPAICCTVIVDAEGTIQEYtINFYAATIKSH 313
59713566  234 DPTAYITPDDSMDKVARERGYTIYLPGRNIPMLPRDLSDELCSLIEGQERPALCCTVLVDANGNIQEDsINFFAATIKSH 313
52425523  314 AKLAYNNVSDYLEQVE--NaWQPeNESTQQQINWLHQFALVRINWRKKHGLLFKEKPDYSFVLADNGHVREIKAEYRRIA 391
218676897 313 ARLAYDHVSDWLETGAseK-WQP-SEEIAAIVSDLHQFAQARSAWRSANAVVFPDRPDYRFELSEDNDVVAIHADMRRSA 390
28900462  313 ARLAYDHVSDWLENGNsdA-WQP-SEEIATIVRDLYEFSLARAEWREKNAVVFPDRPDYRFELSEDNDVIAIHADMRRSA 390
37676316  327 ARLAYDNVSDWLETGSceK-WQP-SEEIAAIVRDLYEFSQARAEWREKNAVVFPDRPDYRFELSEDNDVVAIHADMRRSA 404
27366602  313 ARLAYDNVSDWLETGSceK-WQP-SEEIAAIVRDLYEFSQARAEWREKNAVVFPDRPDYRFELSEDNDVVAIHADMRRSA 390
262396819 313 ARLAYDHVSDWLENGSseA-WQP-SEEIATIVRDLYDFSLARAEWREKNAVVFPDRPDYRFELSEDNDVVAIHADMRRSA 390
147671789 313 ARLVYDHVSDWLETGSseQ-WQP-SEEIAQVVRDLYAFSQARANWCETHAVVFPDRPDYRFELSADNDVVAIHADMRRTA 390
227812371 313 ARLVYDHVSDWLETGSseQ-WQP-SEEIAQVVRDLYAFSQARANWRETHAVVFPDRPDYRFELSADNDVVAIHADMRRTA 390
209809234 314 ARLSYDNVSDFLETGHceT-WAP-SEIIAQVVTELHEFAQARTTWRQTHAVIFPDRPDYRFELSEDNDVVAIHADTRRCA 391
59713566  314 ARLAYDHVSDFLETGScdK-WQP-NDTIAQVVTELYEFAQVRTTWRETHAVIFPDRPDYRFELSEDNDVIAIHADMRRTA 391
52425523  392 NQIVEESMIIANICCAHYLAKNAQTGIFNTHVGFDKKFLPNAHNFLmanlsneenqQELAERYSVENLATLAGYCRMRHD 471
218676897 391 NKLVEESMISANICAGRVLKESFNQGVFNCHSGFKAEKLTDVLELVn---------PEAETPFTEEQIVSLEGFATLRRW 461
28900462  391 NRLVEESMITANICAGRTLREKFETGVFNTHAGLKPEKIEEVVQLVn---------PEGTLEFTAESIATLEGFAALRRW 461
37676316  405 NRLVEESMITANICAGKTLQAHFGTGVFNCHAGFKPEKIADVVELVn---------PEGTLEFTAESIATREGFAALRRW 475
27366602  391 NRLVEESMITANICAGKTLQGHFGTGVFNCHAGFKPEKIADVVELVn---------PEGTLEFTAESIATREGFAALRRW 461
262396819 391 NRLVEESMITANICAGRTLRDKFETGVFNTHAGIKTEKIEEVVQLVn---------PEGALEFTAESITTLEGFAALRRW 461
147671789 391 NRLVEESMITANICAGKTLQTTFGFGVFNTHAGFKAEKMADVVELMa---------VNGAPNADAETLATVEGFAALRRW 461
227812371 391 NRLVEESMITANICAGKTLQTTFGFGVFNTHAGFKAEKMADVVELMa---------VNGAPNADAETLATVEGFAALRRW 461
209809234 392 NKLVEEAMVTANICAGKTLRNTFNMGVFNSHAGIKLDKFKDVVEIVn---------QLEGVEFTEEQIATLEGFSELRRL 462
59713566  392 NKLVEEAMVTANICAGKTLRAAFNMGVFNSHAGIKSDKLKDVVEIVn---------QLEGVDFTEEQIATLEGFSELRRL 462
52425523  472 IEPIEGDYLEFRLRRFLTFAEFKSELAPHFGLGLTGYATWTSPIRKYSDMVNHRLIKACLANRECV-KPSDETLARLQEA 550
218676897 462 LGSLDNSYYDNRIRKFQAYSEISNEPAPHYAMGLDIYATWTSPIRKYGDMINHRMLKAHILRKTPTqTPDETIGDELALH 541
28900462  462 LAVQETSYLDNRIRKFQAYSEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILDKEPVqKPDDQVGEELALH 541
37676316  476 LSKQETTYLDNRIRKFQTYSEVSNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKALILNKEPVqKPDDSVGEELALH 555
27366602  462 LSKQETTYLDNRIRKFQTYSEVSNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKALILNKEPVqKPDDSVGEELALH 541
262396819 462 LAAQETSYLDNRIRKFQAYSEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILGKEPVqKPDDQVGEELALH 541
147671789 462 LATQETSYLDNRIRKYQSYSEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAPVqTPDETVGEELALH 541
227812371 462 LATQETSYLDNRIRKYQSYSEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAPVqTPDETVGEELALH 541
209809234 463 LGSQPTSYLDARIRKYQTYSETGNEPLPHYAMGLDIYATWTSPIRKYSDMINHRMLKAHILGKEPVqRPDDIVGEELALS 542
59713566  463 LGKQPTSYLDARIRKFQTYSETGNEPLPHYAMGLDIYATWTSPIRKYSDMINHRMLKAHILGKEPVqRPDDIVGEELAIS 542
52425523  551 RKQNRMVERDIADWLYCRYLADKVESNPEFRAEVQDCMRGGLRVQLLENGASVFVPASSIHPNKDEIQVNTDELALYING 630
218676897 542 RRHHGMAERNVGDWLYARTLANAPVEETRFQAEIFDINRAGMRVRLLENGAAAFIPGSLILNNKERIECNGDMGTVSIDK 621
28900462  542 RKHHKIAERNVSDWLYARTLADEPSKQTCFTGEIFDINRAGARVRLLENGAAAFIPGALILDNKERIECNGDNGTISIDK 621
37676316  556 RKHHKIAERNVADWLYARTLADAPENQTLFTGEIFDINRAGMRIRLLENGAAAFIPGSLIIDNKERIECNGDLGTVSIDK 635
27366602  542 RKHHKIAERNVADWLYARTLADAPENQTLFTGEIFDINRAGMRIRLLENGAAAFIPGSLIIDNKERIECNGDLGTVSIDK 621
262396819 542 RKHHKIAERNVSDWLYARTLADEPNKKTCFTGEIFDINRAGARVRLLENGAAAFIPGALILDNKERIECNGDNGTISIDK 621
147671789 542 RKHHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLENGAMAFIPGALILDNKERIECNGEDGTILIDK 621
227812371 542 RKHHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLENGAMAFIPGALILDNKERIECNGEDGTVLIDK 621
209809234 543 RRYHRMAERNVSDWLYCRTLACEVEKETQYTAEIFDINRAGMRVRLIENGAAAFIPGSLIVDNKERIECNGDQGTVSIDK 622
59713566  543 RRFHRMAERNVSDWLYCRTLASEVEKETKYTAEIFDINRAGMRVRLIENGAAAFIPGSLIVDNKERIECNADQGIISIDK 622
52425523  631 ERRYKIGDIVNIRLTEVKEETRSLIGNLV 659
218676897 622 EMVYKLGDVLEVVLSEVNQENRNLVAKPT 650
28900462  622 EVVYKLGDTLEIVLADVNQENRSLVAKPT 650
37676316  636 EVVYKLGDVLEVVLADVNQENRSLVAKPT 664
27366602  622 EVVYKLGDVLEVVLADVNQENRSLVAKPT 650
262396819 622 EVVYKLGDTLEIVLADVNQENRSLVAKPT 650
147671789 622 EVVYKLGDVLEIVLTEVNQENRSLVGKPT 650
227812371 622 EVVYKLGDVLEIVLTEVNQENRSLVGKPT 650
209809234 623 HETFKLGDQLQVTLAEVKEETRNIVAKPV 651
59713566  623 HETFKLGDQLHVVLAEVKEDTRNMVAKPL 651
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