Conserved Protein Domain Family
PRK04184

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PRK04184: PRK04184 
DNA topoisomerase VI subunit B; Validated
Statistics
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PSSM-Id: 235246
Aligned: 67 rows
Threshold Bit Score: 585.703
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
153005630  97 AAKQREISISEFFTKNRHLLGFDNPSKALLTTIKEAVDNSLDACEEAGILPEVTIEVRDLALgpkgegeltkGEGRFVVV 176
124485243   9 KK-QRSISVAEFFEKNKQMLGFDSPTRGIITTIKEAIDNSLDACEEAQVLPDILVSVRRV------------SNDVFRVV 75 
88604152   14 KQ-QRSISVAEFFEKNKHLLGFDSPTRGIVTTVKEAIDNALDACEEAGVLPDIYLGIFQM------------EGDIFKVV 80 
11498260    2 SGKHREISVAEFFEKNKHILGYSNPAKAIITVVKEAVDNALDACEEAGILPDIFVRISKVDD-------------HFKIV 68 
284162384   2 IERPKEISVAEFFEKNKHILGYSNPAKALVTCVKEAVDNSLDACEEAGILPDILVRINRVDK-------------HYRIT 68 
126179532   9 KQ-QRSISVAEFFEKNKHLLGFDSPTRGIITTIKEAVDNALDACEEAEVLPDIFVGIKKV------------DNEVYRIT 75 
288930741   1 -MKQKEISVAEFFEKNKHILGYSNPAKALITCVKEAVDNSLDACEEAGILPDILVKIFRV------------GKN-YRII 66 
289596417  25 KK-QREISVAEFFEKNKQILGFDSLTKALVVSVKEAVDNSLDACEEAEILPDIYVEIQNV------------SKDEYKII 91 
154151277   9 KQ-QRSISVAEFFEKNKHLLGFDSPTRGVITTIKEAVDNALDACEEAQVLPDIYISIKKT------------GPEIFRII 75 
219852784   9 SS-QRSISIAEFFEKNKHLLGFDSPTRGIITTIKEAVDNALDACEEAEVLPDIYIEVKRK------------TGDLFWIM 75 
153005630 177 IEDNGPGIVKAQAPKIFGKLLYGSKFHRLKQSRGQQGIGISAAAMYGQLTTGQPIRVTSRTGKGKPAHYFEIQIDTRKNN 256
124485243  76 VEDNGPGIVPEKMPSVFAKLLYGSRFHQVRQTRGQQGIGISAAVLYAQLTTGKPTIVTSRTDAKNKAHTMSLVIKTETNE 155
88604152   81 VEDNGPGIVPENIPYVFGKLLYGSRFHQIRQSRGQQGIGISAAVLYAQLTSGRPTLVISRCGSDRPAFRFLVQIKTETNE 160
11498260   69 VEDNGPGIPREQIPKVFGKLLYGSRFHEIRQSRGQQGIGISAAVLYAQLTTGKPATVISKTPDEDRAKKVVLYINTKKNE 148
284162384  69 VEDNGPGIEKDEIPRIFGKLLYGSRFHTLKQSRGQQGIGISSAVLYAQLTTGKPTRVISKRRGES-AWLYEILIDTKRNE 147
126179532  76 VEDNGPGIVPENVPLVFGKLLYGSRFHQIRQSRGQQGIGISAAVLYAQLTTGIPTLVVSRTGAKARAHRFELLIRTETNE 155
288930741  67 VEDNGPGIEKEEIPKVFGKLLYGSRFHTIKQSRGQQGIGISSAVLYAQISTGKPAKILSKVEGDE-AYEIELFINTKKNE 145
289596417  92 VEDNGPGIIRRNIPLVFGKLLYGSRFHAIRQSRGQQGIGISAVVLYGQLTTGKPTRVISKIKEEEVAYEVLLTIDTKKNE 171
154151277  76 VEDNGPGIVPAQVPFVFGKLLYGSRFHQIRQTRGQQGIGISAAVLYAQLTSGLPTVVISRTGVKEQAHKFGIQIKIETNE 155
219852784  76 VEDNGPGIMPEQVPFVFGKLLYGSRFHQIRQSRGQQGIGISAAVLYAQLTSGTPAVVTTRTGPATPAVRMEIQIKVATNE 155
153005630 257 PVVTEDRQLDeWHLEHGTRVELEIVANWQTG-QRFVNRYVEHTALSNPHATVHYVRPRQERISFPRATEELPKEASEIKP 335
124485243 156 PEVLSHEEVD-WILPHGTRVQLEFKSNIAA--RKKLIEYLKYTSIVNPHAKFR-VEIEDEAFTFERVSSEVPPCPVAIKP 231
88604152  161 PEILKREETT-WDRVHGTRIEIEFKSSLTA--RKRLIEYLRYTSVVNPHARIR-VEIDGEAILFDRASDEPIIPPQAILP 236
11498260  149 PEIVEEGEEE-WYLPSGTKIELEVAGNYVRErKQSVYEYLRETSVINPHAKITFVEPDGTINEFKRVTDDIPQPPKSIKP 227
284162384 148 PEVVREEKID-WHRPHGIRIELEVEGSYVKGrRQSVYEYLRQTSIINPHTRITFIEPDGEIHEFERVSYELPKIPKAIKP 226
126179532 156 PEIISHEEID-WDRTHGTRIEIQFKSTLAA--KKRLVDYLRLTAIVNPHARIT-ADIDGEMTVFERVSNEVPPCPKPILP 231
288930741 146 PEIVSEKKVE-WYAPHGTRIELEIVGSYVKEkRQSVYEYLRQTSIVNPHAKITLIEPDGTIHEFKRISNVPPQPPKEIKP 224
289596417 172 PRVIKEIPKI-WDREQGTRIEISIRARYVRG-KQSVYEYLQQTAIVNPHAQITFVEPDGKKTIFKRATDKLPPPTREIKP 249
154151277 156 PDVISEQPFE-WDRIHGTRVQIEFKSTMSA--KKKLLEYLRYTSIVNPHARFRVE-LDDEAFTFERVSQEVIACPVAIQP 231
219852784 156 PKVLSNKEVP-WDRTHGTRVEIEFTSTLSA--KKRLIEYLRYTGVVNPHARIRAE-IDGEPFTSERVSNEVLVCPKAIKP 231
153005630 336 HPHGVELGALMLMASDSKAHDVKGFLQTAFSRVSGQVADEIVKRAGFkGRVRPRDVAAdrAVADKLHKAIGATKIMNPPT 415
124485243 232 HPYGIELGVLKRMTA-ASDLPLKEFLVESFSKVGEKTSLEICSSARLdPVVKVSTLDL--ESLNRLLDAMQTTKIPAPSA 308
88604152  237 HPHGVELGELKRIAA-GSKEPLEPFLINSFSRVGQKTAHEIIQLAGLkETTKANKLDA--DGLARLQSAMQQVKVPPPPA 313
11498260  228 HPHGIELGTLMSMLKSTRATTLRRFLKEEFVRVGEKIADDVLRKAGFsGDETPQEMGR--DDAAKLLNAFRQTDFLPPPT 305
284162384 227 HPHGIELGNLIKMLKDSRARNLKEFLIKEFSRVGDKTAEEILRKSGL-QNKHPRAVTR--EEAIKLLEAFKETQLLPPPT 303
126179532 232 HPHGIEFGALKRIAA-ANTGTVEEFLIGSFSKVGKKTADEMIALAGLkPSRKVNKLES--EELKRLLDAMQAVKVPAPPA 308
288930741 225 HPHGIELGTLLNMLKYSKHRDLKSFLKKEFVRVGDKIAEEIIQKAGL-SNDDPKKLSR--DEVEKLLEAFKLTNLLPPPT 301
289596417 250 HPHGIELGELLNMARNTKTYRLTSFLTNEFSRVSPKITEEICKKAYLyGDMRPQELSI--EEAKRLLEAFKKVKLMAPPT 327
154151277 232 HPHGIEFGQLKRMAAASDE-KLIDFLVNGFSRVGKKTAQEMCDRAGLkVTAKVAGLSA--DELKNLLAAMQAVAVPAPPT 308
219852784 232 HPYGIELGMLKRMAEGETR-PLLEFLTSEFSRVGKKTAEEICSIASLrPAAQVKRLNA--DQQRSLLAAMQQVKVPAPPT 308
153005630 416 N-CLSPIGDELMKRGLISflnVIETEgpetdeqldldhaakkktsrkekqakaaapevpdappeegvekikghnyFIAT- 493
124485243 309 SqCLSPITDELIVKGMEK---EFELD-------------------------------------------------FIKA- 335
88604152  314 NqCLSPIGEVLIRQGLEK---EFQFD-------------------------------------------------FCSA- 340
11498260  306 D-CLSPIGEAMIAKSLMA---EFQPE-------------------------------------------------FVYA- 331
284162384 304 D-CLSPIGGDLIIKSLVS---EFKPE-------------------------------------------------FVCA- 329
126179532 309 QqCLSPIGEDLICKGLEK---EIQLD-------------------------------------------------FIKA- 335
288930741 302 D-CLSPIGEDLIKRSLLE---EFKPE-------------------------------------------------FVFA- 327
289596417 328 D-CLSPIGETLIKKGLKNvlgSLRPS-------------------------------------------------FYAQp 357
154151277 309 SqCLSPIGEDLIRRGLDK---EFQMD-------------------------------------------------FVAA- 335
219852784 309 SqCLSPIGEELMVRGLEA---EFRMD-------------------------------------------------FVKA- 335
153005630 494 VTRPPKVYRGNPFQVEVGLAYGGSWPADKTIELFRFANRVPLLFQRGACGMTDAIAKTDWRNYLLSQPkg-alPVGPMAL 572
124485243 336 RTRPGNVYGGHSFIVEAAIGYGGKLPPEGNAILLRFANRVPLLYQQGACAITNAVQNVNWKAYGVSQSg---lPTGPILI 412
88604152  341 RTRPASVYHGHPFIVEAALGYGGKLDAEGNARIMRFANRVPLMYQQGACAITGCISAVNWRTYNISQSg---lPTGPVLI 417
11498260  332 VTRKPKVYSGHPFLVEVGLAYGGEI-KSEKVTLLRYANKIPLLYQQGGCALTKAVESVNWKSYGMVQNrg-elPSAPAVI 409
284162384 330 VSRKPKVYSGNPFLVEVGLAYGVNT---DRTVLLRFANRIPLLYQQGGCALTKAVESVNWKSYGVQQNkn-elPNAPMVI 405
126179532 336 RTRPSTVYGGHSFIIEAAIGYGGKVPPEGTAQLFRFANRVPLLYQQGACAITSCASQVNWKSYGLSQQg---lPMGPVLI 412
288930741 328 TTRKPKVYSGHPFLIEVGIAYGGEI-EEEKVKILRFANKIPLLYQQSGCALTKAVESVNWKAYGISQNkg-elPQAPMVI 405
289596417 358 VTRTPKVYSGNPFVVEVGLVYGGELPKDQPVRILRFANRVPLLYQQGACVTTKAISSVDWRRYGLEQRggqgiPVGPAII 437
154151277 336 RTRPSSVYSGHPFVVEAAIGYGGRLEAEGNATILRFANRVPLMYQQGACAITECIANVNWKSYNISQQg---lPLGPVLI 412
219852784 336 RTRPSSVFSGHPFMVEAALGYGGKLPPEGNGQIMRFANRVPLIYQQGACAITQSVAGVNWKAYGIGQQg---lPMGPVLI 412
153005630 573 LVHIASVWVPFTSEAKEAVAHYPEIIREIQLAAQECGRKLAAHIRKKQHADYQAQRRSIFELYIQEVAHAIGRITRKSPE 652
124485243 413 LVHVAATSVPFTGESKDAIAAIPEIEREITLALQELGRDLKMFLSRRDRNKLQDDRARAICSVIPLIAAKVGEIVELPVP 492
88604152  418 LVHVASTNVPFTSESKDAIASIPEIEREITLALQELGRDLKTFLSRRDKSRLSEERARAICAIIPEIATKVAETIEKPVP 497
11498260  410 LIHLASTNIPYTSESKESVAAIPEIIDETRLALQEVGRRLKEYLERKSRQQKKKKKEEMIGKVLPLIAKKVCEILEKEPL 489
284162384 406 LIHIASTNIPYTSESKEAIAGIPEIVEEVRLALQEVGRKLKAYIDKKRAIQEKRKKEGALLKIIPIIAKKCAEILERDEI 485
126179532 413 MVHVASTNVPFTSESKDAVASIPEIEREVVLVLQELGRELKTYLYRRDKKKQQDDRARAICSVIPEIAAKVSEIVEQPLV 492
288930741 406 LIHLASTNVPYTSESKEAVASIPEIVEELRLALQEAGRKLREYLERKSRIEKKKKKENELFKIIPLLAEKVSEVLEREVP 485
289596417 438 LVHVASTRVPFTSEAKEAIADVPEIREEIELALKSLGRQLRLYNVKKERKSKMTEKFFLVNKLLPEIARKSAEIVEKPIP 517
154151277 413 LVHVASTNVPFTSESKDAIADIPEIEKEIVLALQDLGRELKTFLSRRDRNKLAEDRARAVCAVIPEIAAKVSEIVEKPVV 492
219852784 413 LVHVASTNVPFTSESKDAIASIPEIEKEIVLALQDLGRDLKAFISRRDRTKLQEDRARAICAIIPDIALKVSEIVEKPLP 492
153005630 653 PIKREFLRLADRVTEQELAEQDAALEEASKKIAKRPRRAE 692
124485243 493 DTSLIEGRIMRRVVLKKSTAGG-----KIMIHIDNYTTKP 527
88604152  498 DITPIEGQIMRRLVTKKWTDNG-----TVNVSIQNYTSHA 532
11498260  490 EIDRIVARIMGYLHVERIVEER-DGVKVVTIRVSNFTRSK 528
284162384 486 DVSKVLARITGKVHIEKVV-----DSKIVKITVSNFSRSK 520
126179532 493 DTSPIEGKIMRKVVAKKRTVDG-----KVRIDVNNYTAKE 527
288930741 486 DYEKVVARIMGSVYISRVVFSE-NGRNFAVLRIANYSKYK 524
289596417 518 PLEPVISKIMNVVWIDESVEKEEDKIKVNVRVANFTSKHQ 557
154151277 493 DTTPIEGRLMRKLIAKKWTRDG-----KVTIEANNYTASD 527
219852784 493 DLTVIEGQIMHKVVARKRTTTG-----RVVLSVHNYTAKD 527
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