Conserved Protein Domain Family
PRK04163

?
PRK04163: PRK04163 
exosome complex protein Rrp4
Links
?
Statistics
?
PSSM-Id: 235233
Aligned: 58 rows
Threshold Bit Score: 200.117
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
305663897   8 SLQTSKRILVVPGDSVqISQDVVIDPQQilylYKkDDNTFISTITALLDFENIddkkKLRVIPLKGRYIPREGDIVIGIV 87 
148642303   1 MIYVENKDLVIPGEVL-ADDEYYSGRGT----FK-ENGKICSSLMGLVSLRNK----KIRVIPLKSKYVPKKGDVVIGKI 70 
288560610   6 MIYVNEKDLVVPGELL-AEDDYYSGRGT----FE-DDGKICSKLLGLVSLRNK----KISVIPLKSKYIPKKGDVVIGKI 75 
126459547   1 MYYVTPRQLIFPGDLV-ATADSRVEGPV----YV-DNGKIRSAVVGLVEFRED----VVVIVPLDGVYKPKKGDLVIGYV 70 
145592133   1 MYFVTPRQLIFPGDVI-ATADKKVEGPV----YL-DNGRYRSLVVGLVEFRED----SVVIVPLEGTYRPKKGDVVVGYV 70 
18313179    1 MYYVTPRQLVFPGDVI-ATADSKVEGPV----YL-DNGKYRSLVVGLVEFRED----VVVVVPLEGTYKPKKGDLVIGYV 70 
159040950   1 MLNVTDRMIVLPGDLI-GGRSNDYVIVGs--vYW-EGDKAYASTVAMINIKGDvkpmEVQVIPLNGAYKPRQGDIVIGYV 76 
15678711    1 MLLVNEKDLVVPGQVL-AENEYFPGRGT----FK-EDNRICSSFVGLVSVRNK----KINVIPLQSKYIPKRGDVVIGEI 70 
304314831   1 MLLVNEKDLVVPGQVL-AENDYYPGRGT----FK-EGKKICSSFVGLVSVRNK----KINVIPLQSKYIPKRGDVVIGEI 70 
170290984   5 TLLVRDKEVVIPGQPL-ARGKVKPGKDV----YVdESGTIRSKKLGLVSLKDD----EISIVPLVGAYIPKEDDLVIGIV 75 
305663897  88 VDVTLSSWIIDINSPYLSVLNASDYLGRsfnpLTDNIRKY-LEIGDVVVGKIATFDRSRG--PILTVQDKGLGKVVDGSL 164
148642303  71 KDVRFSMWDVDINSPYSGILPAFEVFGR----EKKELNKV-FDVGDVLFLRVVDVDEVKK--VKLGLKGRGMGKFRGGII 143
288560610  76 DDVRFSMWGVDINSPYSGILPASEVFGR----EKKELSRV-FDIGDVLFLRIVDVDEVKK--VKLGLKGRGMGKFRGGVI 148
126459547  71 TDVLATGWEVDVRTFMPAYLPVSEALHKhvdlETTPLTTF-LNIGDVIVAKVKDVDLTDEypVVLTLKEERVGKVESGTV 149
145592133  71 TDVLATGWEVDVRSFMPAYLPVSEALHKhvdlETTPLTTF-LNVGDVIVAKVKDVDLTDEypIVLTLREEKVGKVESGTV 149
18313179   71 TDVLATGWEVDVRSFMPAYLPVGEALHRhvdlETTPLTTF-LNIGDVVVAKVKDVDLTDEypIILTLKDEKVGKVESGTV 149
159040950  77 IDILVNGWEIDIKSPYSAYLPINEATLKpvdvVTADLRNI-LNIGDIVLAKISDFNLAKDypVTLTIKESRLGRIEDGTV 155
15678711   71 TDIRFSMWGLDINSPYTGLLPASEVFGK----DKRELESV-FDIVDVLLLRVVDVDEVKK--VKLGLKGRGLGKFRDGIL 143
304314831  71 TDIRFSMWGLDINSPYSGLLPASEVFGK----EKRELENV-FDIGDVLLLRVVDVDEVKK--VKLGLKGRGLGKFRDGIL 143
170290984  76 SKISGNTILVDIRSPYQGALPIQRRAER------VDLKKYdLKIGDVILAKVRSFDGASS--LILTIDAEGLGKLEGGYL 147
305663897 165 IEIEPIKVARVIGKKKSMLNMLIEQTKCDILVGNNGRIILRCPNPeLEYIAILAIKKIESEAHTTGLTERIREFI----- 239
148642303 144 VDITPTKVPRLIGKKGSMINMIKDKTNCKIIVGQNGLVWVKGEED-MEQLTKDIIHMIEAEAHTSGLTNKVKNKLslaid 222
288560610 149 VDIAPTKVPRLIGKKGSMINMIKDKTGCKIVVGQNGLVWVKGNED-MEQIVKNTIKLIEREAHTSGLTDRVKNKLcllid 227
126459547 150 VEIAPVKVPRVVGKKGSMLAVLAE-VGCDIVVGQNGRIWVKCKSPrDEVFLTSLIKKIEAESHVMGLTDRVKAEV----- 223
145592133 150 VDIAPVKIPRVIGKKGTMLNTLLE-LGCDIVVGQNGRIWIKCGDPrDEVFLASLIRKIELESHVMGLTDRVKSEI----- 223
18313179  150 VEITPVKVPRVIGKRGSMLNTLME-LGCDIVVGQNGRIWVKCKDPrDEVFLASLIRKIEAESHVMGLTDRIRAEI----- 223
159040950 156 IEIDPVKVPRVIGKRGSMVNMFKDELNCDVTVGQNGRIWVRCRNKrDELFVSQTIKFIEKESHQSGLMDKVKAII----- 230
15678711  144 VYITPTKVPRLIGKRGSMINMVKEKTHCDIVVGQNGVVWIKGEPD-MERIAEKVVLMIDREAHTSGLTDRVRELLdrltg 222
304314831 144 VYITPTKVPRLIGKRGSMINMVKEKTHCDIVVGQNGVVWIKGEPD-MERIAERVILMIDREAHTSGLTDRVRELL----- 217
170290984 148 LEVDPAKVPRVIGKRQSMLSMLKEATRSEIIVANNGRIWVKPPSVkELIVLEKALKKIEEESHVSGLSDRISSLL----- 222
305663897 240 ---------IEEKVKRGLIKY 251
148642303 223 gelpqeddySDDYEELEKPKL 243
288560610 228 g---elpeeETEVMEEKEEIV 245
126459547 224 ---------ENYKKMRQQAQA 235
145592133 224 ---------EKYKESKQK--- 232
18313179  224 ---------ENYKTSKQQGTV 235
159040950 231 ---------QNYKSTSGLP-- 240
15678711  223 vepeiqveeSEGTEKPETPES 243
304314831 218 ---------DRLTGTEPKDLD 229
170290984 223 ---------SQELSR------ 228
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap