Conserved Protein Domain Family
PRK04132

?
PRK04132: PRK04132 
replication factor C small subunit; Provisional
Statistics
?
PSSM-Id: 235223
Aligned: 6 rows
Threshold Bit Score: 1056.36
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
15669613     1 MVIIMEKPWVEKYRPKTLDDIVGQDEIVKRLKKYVEKKSMPHLLFSGPPGVGKCLTGDTKVIVNGEIREIGEVIEEISNG 80  
18976465     7 EVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKCLTGDTKVIANGQLFELGELVEKLSGG 86  
14590058     9 EVKVLEKPWVEKYRPQRLDEIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKCLTGDTKVIANGQLFELRELVEKISGG 88  
57642153     7 EVKILEKPWVEKYRPQRLEDIVGQDHIVKRLKHYVKTGSMPHLLFAGPPGVGKCLTGDAKVIANGRLFELGELVEKVSKG 86  
14520328     9 EVKVLEKPWVEKYRPQKLEEIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKCLTGDAKVIANGELTTIGELVERISNG 88  
289192114    1 ----MDKPWVEKYRPKTLDDIVGQDEIVKRLKKYVEKKSMPHLLFSGPPGVGKCLTGDTKVIINGEIREIGEVVEEISNG 76  
15669613    81 KFGVTLTNNLKVLGIDEDGKIREFDVQYVYKDKTNTLIKIKTKMGRELKVTTYHPLLINHKNGEIKWEKAENLKVGDKLA 160 
18976465    87 RFGPTPVKGLKVLGIDEDGKLREFEVQYVYKDRTDRLIKIKTQLGRELKVTPYHPLLVNRENGEIKWIKAEELKPGDKLA 166 
14590058    89 KFGPTPVKGLKVIGIDEDGKLREFEVQYVYKDKTERLIRIRTRLGRELKVTPYHPLLVNRRNGEIKWVKAEELKPGDKLA 168 
57642153    87 RFGPTPVEGLKVLGIDEDGKLREFEVQYVYKDRAERLIKVRTRLGRELKVTPYHPLLVNRKNGEIMWVKAEELRPGDRLA 166 
14520328    89 KLGPTPVRGLTVLGIDEDGKLVELPVEYVYKDKTSELVKIRTRLGRELKVTPYHPLLVNRRNGKIEWVKAEELKPGDRLA 168 
289192114   77 KFGATLVNNIKVLGIDEYGKVREFDVQYVYKDKTNTLIKIKTKMGRELKVTTYHPLLINNKNGEIKWEKAENLKVGDKLA 156 
15669613   161 TPRYILFNESDynEELAEWLGYFIGDGHADKESNKITFTNGDEKLRKRFAELTEKLFKDAKIKERIHKDRTPDIYVNSKE 240 
18976465   167 IPSFLPLITGE--NPLAEWLGYFMGSGYAYPSNSVITFTNEDPLIRQRFMELTEKLFPDAKIRERIHADGTPEVYVVSRK 244 
14590058   169 VPRFLPIVTGE--DPLAEWLGYFLGGGYADSKENLIMFTNEDPLLRQRFMELTEKLFSDARIREITHENGTSKVYVNSKK 246 
57642153   167 VPRFLPAIAEE--DPLAEWLGYFIGDGHADSKNKVITFTNTDPSLRQRFMELTERLFPDAKIRERIHKNRAPDVYVNSRR 244 
14520328   169 IPSFLPAMLND--NPLAEWLGYFFGNGYTDSEERVV-FESKSKELRKRFMELTRKLFQDAEIKE-----DSGKVYVSSSE 240 
289192114  157 TPRYILFEETEynEELAEWLGYFIGDGHADSKYNKITFTNSDEKLRRRFAELTEKLFKDAKIKERIHKDRTPDIYVNSKE 236 
15669613   241 AVEFIDKLGLRgkkadkvRIPKEimRSDALRAFLRAYFDCDGGIEKHSIVLSTASKEMAEDLVYALLRFGIIAKLREKvn 320 
18976465   245 AWSLVNSISLT-------LIPRE--GWKGIRSFLRAYSDCNGRIESDAIVLSTDNNDMAQQIAYALASFGIIAKMDGE-- 313 
14590058   247 ALKLVNSLGNA-------HIPKE--CWRGIRSFLRAYFDCNGGVKGNAIVLATASKEMSQEIAYALAGFGIISRIQEy-- 315 
57642153   245 AWELVSSLGLAgrkadkvYIPEK--GWEGIRSFLRAYFDCDAGVDKNAVVLATASREMAEQVTYALAGFGITSKIREKkv 322 
14520328   241 VKRLVKSLNKD-------SIPEQ--AWKGLRSFLRAYFDCNAEI-KDKIIVSTAGKEIAEQISYALAGLGIVAEVDDKg- 309 
289192114  237 AIEFIDKLGLRgkkadkvRIPKEimGSNALKSFLRAYFDCDGGVEKHSVVLSTASKEMAEDLVYALSRFGIIAKLREKvn 316 
15669613   321 knnnkvyyHIVISNSSNLRTFLDNIGFSQERKLKKLLEIIKDENPNLDVITIDKEKIRYIRDRLKVKLTRdieKDNWSYN 400 
18976465   314 --------DVIISGSDNIERFLNEIGFSTQSKLKEAQKLIRKTNVRSDGLKINYELISYVKDRLRLNVND---KRNLSYR 382 
14590058   316 --------RVIISGSDNVKKFLNEIGFINRNKLEKALKLVKKDDPGHDGLEINYELISYVKDRLRLSFFNd--KRSWSYR 385 
57642153   323 rg--ktyyHVTISGSENLERFLSEIGFSHREKLERTLKLVKKPNPNLDSLNVNYELISYVRDRLKLNFSDd--KRSWSHR 398 
14520328   310 --------SVIISDPENVSRFLDEIGFSVEEKKEEAKALIKKSTLNL-GIYVDKELISYVREKLKLSFYEn--ETMWSPE 378 
289192114  317 knnnktyyHIVISNSSNLKAFLDNIGFSQERKLEKLLEIIKDENPNLDVVTIDKEKIRYIRDRLKVKLTRdieKDNWSYN 396 
15669613   401 KCRKITQELLKEIYYRLEELKEIEKALEENILIDWDEVAERRKEIAEKTGIRSDRILEYIRGKRKPSLKNYIKIANTLGK 480 
18976465   383 NAKELSWELMKEIYYRLEELERLKKVLSEPILIDWNEVAKKSDEVIEKAKIRAEKLLEYIKGERKPSFKEYIEIAKVLGI 462 
14590058   386 EAKEISWELMKEIYYRLDELEKLKESLSRGILIDWNEVAKRIEEVAEETGIRADELLEYIEGKRKLSFKDYIKIAKVLGI 465 
57642153   399 KARKISWELMKEIYYRLDELERLKESLSRSILIDWNEMAERRKEIAEKTGIRADRLLEYIKGKRKPSLRNYIKIAKALGI 478 
14520328   379 KAREIAWKLMKEIYYRLDELERFKKALSKSVIIDWSEVEKKKEEISEKTGISVNEILEYAKGKRKPSLEEYVKIAKALGV 458 
289192114  397 KCKKIAWEVLKEIHCRLEELKEIETALEGSILIDWNEVTERRKEIAEKTGIRSDRILEYIKGKRKPSLKNYIKIANALGK 476 
15669613   481 NIEKIIDAMRIFAKKYSSYAEIGKMLNMWNSSIKIYLESNT-QEIEKLEEIRKTELKLVKEILNDEKLIDSIGYVLFLAS 559 
18976465   463 NVERTIEAMKIFAKRYSSYAEIGRKLGTWNFNVKTILESDTvDNVEILEKIRKIELELIEEILSDGKLKEGIAYLIFLFQ 542 
14590058   466 DVEHTIEAMRVFARKYSSYAEIGRRLGTWNSSVKTILESNA-VNVEILERIRKIELELIEEILSDEKLKEGIAYLIFLSQ 544 
57642153   479 DLEPTINAMRVFARKYSSYAEIGRKLGTWNSSVRIILESNT-EKIKELEEIRKIELELIGEILSDEKLKEGVAYLIFLSQ 557 
14520328   459 ELKETLEAIFTFGKKYLGYVISD--------------------EIETLEEVRKEELKRLKELLNDEKLKKGVAYLIFLAQ 518 
289192114  477 NIEKTIDAMRIFAKKYSSYAEIGKMLNMWNSSVRIYLETNT-QEIEKLEEIRKVELKLVRDILNDEKLMDSINYVLFLAS 555 
15669613   560 NEIYWDEIVEIEQLNGEFTIYDLHVPRYHNFIGGNLPTILHNTTAALCLARDLFGENWRDNFLELNAsvskdtpilvkid 639 
18976465   543 NELYWDEITEVKELRGDFIIYDLHVPGYHNFIAGNMPTVVHNTTAALALARELFGENWRHNFLELNA------------- 609 
14590058   545 NELYWDEITKVEELRGEFIIYDLHVPGYHNFIAGNMPTVVHNTTAALALSRELFGENWRHNFLELNA------------- 611 
57642153   558 NELYWDEITEVKELKGDFVIYDLHVPGYHNFIAGNMPTVVHNTTAALALARELFGENWRHNFLELNA------------- 624 
14520328   519 NELLWDEIIEVEKLKGDFVIYDLHVPKYHNFIGGNLPTVLHNTTAALALARELFGENWRHNFLELNA------------- 585 
289192114  556 NEIYWDEIVEIEQLNGDFIIYDLHVPKYHNFIGGNLPTVLHNTTAALCLARDLFGENWRDNFLELNA------------- 622 
15669613   640 gkvkrttfeeldkiyfetndenemykkvdnlevltvdenfrvrwrkvstiirhkvdkilrikfeggyieltgnhsimmld 719 
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328       --------------------------------------------------------------------------------     
289192114      --------------------------------------------------------------------------------     
15669613   720 englvakkasdikvgdcflsfvaniegekdrldlkefepkditsrvkiindfdidedtawmlglyvaegavgfkgktsgq 799 
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328       --------------------------------------------------------------------------------     
289192114      --------------------------------------------------------------------------------     
15669613   800 viytlgshehdlinklndivdkkgfskyenftgsgfdrkrlsakqirilntqlarfveenfydgngrrarnkripdiife 879 
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328       --------------------------------------------------------------------------------     
289192114      --------------------------------------------------------------------------------     
15669613   880 lkenlrveflkgladgdssgnwrevvrissksdnllidtvwlarisgiessifenearliwkggmkwkksnllpaepiik 959 
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328       --------------------------------------------------------------------------------     
289192114      --------------------------------------------------------------------------------     
15669613   960 mikklenkingnwryilrhqlyegkkrvskdkikqilemvnveklsdkekevydllkklsktelyalvvkeieiidyndf 1039
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328       --------------------------------------------------------------------------------     
289192114      --------------------------------------------------------------------------------     
15669613  1040 vydvsvpnnemffagnvpillhnSDERGIDVIRTKVKDFARTKPIGDVPFKIIFLDESDALTADAQNALRRTMEKYSDVC 1119
18976465   610 -----------------------SDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNV 666 
14590058   612 -----------------------SDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNV 668 
57642153   625 -----------------------SDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSNNV 681 
14520328   586 -----------------------SDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNV 642 
289192114  623 -----------------------SDERGIDVIRTKVKDFARTKPIGDVPFKIIFLDESDALTADAQNALRRTMEKYSDVC 679 
15669613  1120 RFILScltgdakitlpdereikiedfikmfeerklkhvlnrngedlvlagvkfnskivnhkvyrlvlesgreieatgdhk 1199
18976465   667 RFILS--------------------------------------------------------------------------- 671 
14590058   669 RFILS--------------------------------------------------------------------------- 673 
57642153   682 RFILS--------------------------------------------------------------------------- 686 
14520328   643 RFILScvtgdtkvytpderevkirdfmnyfenglikevsnrigrdtviaavsfnsrivghpvyrltlesgriieatgdhm 722 
289192114  680 RFILS--------------------------------------------------------------------------- 684 
15669613  1200 fltrdgwkevyelkeddevlvypalegvgfevderriiglnefyefltnyeiklgykplgkaksykelitrdkekilsrv 1279
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328   723 fltpegwkqtydikegsevlvkptlegtpyepdprviidikefynflekierehnlkplkeaktfrelitkdkekilrra 802 
289192114      --------------------------------------------------------------------------------     
15669613  1280 lelsdkyskseirrkieeefgikislttiknlingkidgfalkyvrkikelgwdeityddekagifarllgfiigdghls 1359
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328   803 lelraeiengltkreaeilelisadtwipraelekkarisrtrlnqilqrlekkgyierriegrkqfvrkirngkilrna 882 
289192114      --------------------------------------------------------------------------------     
15669613  1360 kskegrilitatinelegikkdleklgikasniiekd------------------------------------------- 1396
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328   883 mdikrileeefgikisyttvkkllsgnvdgmayrilkevkekwlvryddekagilarvvgfilgdghlarngriwfnssk 962 
289192114      --------------------------------------------------------------------------------     
15669613  1397 ----------------------iehkldgreikgktsfiyinnkafylllnfwgveignktingynipkwikygnkfvkr 1454
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328   963 eelemlandlrklglkpseiierdssseiqgrkvkgriymlyvdnaafhallrfwkvevgnktkkgytvpewikkgnlfv 1042
289192114      --------------------------------------------------------------------------------     
15669613  1455 eflrglfgadgtkpyikkyningiklgirveniskdktleffeevkkmleefevesyikvskidnknltelivkannkny 1534
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328  1043 kreflrglfgadgtkpcgkrynfngikleirakkeslertveflndvadllrefdvdskitvsptkegfiirlivtpnda 1122
289192114      --------------------------------------------------------------------------------     
15669613  1535 lkylsrisyayekdnfarlvgeylrikeaykdiilkeiaenalkeadgekslrelarkynvpvdfiinqlkgkdiglprn 1614
18976465       --------------------------------------------------------------------------------     
14590058       --------------------------------------------------------------------------------     
57642153       --------------------------------------------------------------------------------     
14520328  1123 nylnfltrvgyayakdtyarlvgeyiriklaykniilpgiaekaielatvtnstyaakvlgvsrdfvvnrlkgtqigitr 1202
289192114      --------------------------------------------------------------------------------     
15669613  1615 fmtfeeflkekvvdgkyvseriikkecigyrdvyditchkdpsfiangfvshnCNYPSKIIPPIQSRCAVFRFSPLKKED 1694
18976465   672 -----------------------------------------------------CNYSSKIIEPIQSRCAIFRFRPLRDED 698 
14590058   674 -----------------------------------------------------CNYSSKIIEPIQSRCAIFRFRPLRDED 700 
57642153   687 -----------------------------------------------------CNYSSKIIEPIQSRCAIFRFRPLRDED 713 
14520328  1203 dfmtfeefmkervlngyviekvikkeklgyldvydvtcardhsfisnglvshnCNYSSKIIEPIQSRCAIFRFRPLNDED 1282
289192114  685 -----------------------------------------------------CNYPSRIIPPIQSRCAVFRFSPLKKED 711 
15669613  1695 IAKKLKEIAEKEGLNLTESGLEAIIYVSEGDMRKAINVLQTAAALSDVIDDEIVYKVSSRARPEEVKKMMELALDGKFME 1774
18976465   699 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLK 778 
14590058   701 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLK 780 
57642153   714 IAKRIRYIAENEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDTKITDENVFLVASRARPEDVREMMTLALEGNFLK 793 
14520328  1283 IAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDRKITDENVFLVASRARPEDIREMMLLALKGNFLK 1362
289192114  712 IAKKLKEIAEKEGLNLTESGLEAIIYVSEGDMRKAINVLQTAAALSDVIDDEIVYKVSSRARPEEVKKMMQLALDGKFIE 791 
15669613  1775 ARDLLYKLMVEWGMSGEDILNQMFREINSLDIDERKKVELADAIGETDFRIVEGANERIQLSALLAKMALMGR 1847
18976465   779 AREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGK 851 
14590058   781 AREKLREILLKQGLSGEDVLIQMHKEVFNLPIDEPTKVYLADKIGEYNFRLVEGANEMIQLEALLAQFTLVGK 853 
57642153   794 AREKLRDILLRQGLSGEDVLIQMHKEVFNLPIPEDKKVALADKIGEYNFRLVEGANEMIQLEALLAQFTIMGK 866 
14520328  1363 AREKLREILLKQGLSGEDVLVQMHREVFNLPIDEPMKVYLADKIGEYNFRLVEGANEMIQLEALLAQFTLIGK 1435
289192114  792 ARDLLYKLMVEWGMSGEDILNQMFREINSLDIDERKKVELADAIGETDFRIVEGANERIQLSALLAKMALMGK 864 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap