Conserved Protein Domain Family
ligB

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PRK03180: ligB 
ATP-dependent DNA ligase; Reviewed
Links
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Statistics
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PSSM-Id: 235108
Aligned: 48 rows
Threshold Bit Score: 650.49
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
120403019   1 MLLVDVANASADVAAMSARLAKVARIAELLRTAgr-------------------------------------qgDARLVR 43 
302869414   1 MRFAELAATSAAVGATSGRRAKVELLAAALRGL-----------------------------------------EPGEIP 39 
182440113   1 MLLAELAQVSLEVAATSARSRKTALLAGLFRNA-----------------------------------------GPEDVP 39 
21219712    1 MLLARLAQVSREVAATSARSRKTVLLAELFREA-----------------------------------------EAADVP 39 
290962181   1 MLFARLARVSQEIAATSARSRKTALLADLFRDA-----------------------------------------GEEDVP 39 
271968417   1 MLLIDLARTSAAVTADSARLAKIGHLAELLGRV-----------------------------------------DADEAE 39 
258654698   1 -MFVELATTSAAVGATRSRLAKRALLAAAIRAA-----------------------------------------EPDEIG 38 
296270402   1 MLLIELARTSAAVAADSSRKAKIGHLAELLRRA-----------------------------------------GPDEAE 39 
284031333   7 MLLADVVATSSSLSGTRSRLAKAKFIAELLTAAt----------------------------------------DPVETE 46 
269957425  35 VLFHDVAVTSAGVAATRSRLAKRELLAAALRAAahggmtggdatadgaaagegmaggaatggattggpgsddgrAGEEVD 114
120403019  44 VVVSWLSGELTQRQIGVGWRSVRSVPDPAAQPSLTVEDVDARFGEIGSTSGKGSQARRAALLAELFAAATAVEQVFLRRL 123
302869414  40 AGAGYLAGELRQRQTGVGWAGLRDLPPPAAEPTLTVAAVDAAIEEISRVAGAGSQARRRELVGRLFAAATADEQRLLTGL 119
182440113  40 VVIPYLAGRLPQGRIGVGWRSLGEPVEPACDPTLTVTGVDAELTALAATSGPGSQARRRERLRTLFAAATADEQRFLRAL 119
21219712   40 VVIPYLAGRLPQGRIGVGWKVLSRRVPPADAPTLTVRDVDARLTRLGAVSGAGSQAERTRLVGELMGAATEDEQRFLIGL 119
290962181  40 IVIPYLAGRLPQGRLGIGWKVLDQRIPPAGTATLTVREVDARLTAIGAVTGTGSQTERRRLVGALLAAATEDEQRYLVGL 119
271968417  40 IAISYLSGELPQRHIGVGWAGLQDPPDPRLAATATLRQVNDLLDRIKAQAGPGSQAARKALIIELFAALTRQEQTFLSRL 119
258654698  39 LVVTYLSGSLRQRRTGVGWASLSEVPAPAPEPTLSVAAVDDAFEQIAAIGGAGSAAARAAAVQALFARATADEQRLLQAL 118
296270402  40 IAIAYLSGELPQRQIGVGWRSLLDLPGPRQIATATVTQVDAMLERIKAQSGPGSQAARRELLGELFASLTEQEQSFLRRL 119
284031333  47 VVVTYLSGELRQRRTGVGWRTLADVPEPAATPSLTVEQVDRTFAELAEIAGAGSQARRREAVNALFGRATEPEQRFLRQL 126
269957425 115 VVATFLSGRVRQRRTGVGWRSLTSLPAPASAPTLTPLDVDAALQTMADAEGPGSAAVRGEAVRRLFAAATQDEQTFLRGL 194
120403019 124 LTGELRQGALGGVMADAVGKAAGVPSAVVRRAAMLGGDLPAVAAAAVTDGESALAQFTLQVGRPVGPMLAQTATGVADAL 203
302869414 120 FRGELRQGAQAGLLADAVARAADVPVTAVRRALLLAGDLRAVAVAALTGGAAALAGFGLQVGRPLAPMLAQSAPSVDEAL 199
182440113 120 LTGEVRQGALDAVAADALAHAAGAPPADVRRAVMLAGSLQDVATVLLADGPGALADFRLTVGRPVQPMLARSAASVGEAL 199
21219712  120 LTGEVRQGALDAAAVEGLAAATDAPPADVRRAVMLAGSLQTVAEALLADGPGALDRFRLTVGQPVLPMLAHSASSVAEAV 199
290962181 120 LTGEVRQGALDALAVEGLAGATGAPAADVRRAVMLAGSLQTVARALLAEGPRALEGFRLTVGRPVQPMLAHSAPSVAEAV 199
271968417 120 LRSELRQGALDGVMIEAIAKASAVPTAEVRRALTLRGWLPAVGAAALSGGVNALRAFHLEVGRPVSPMLAQSATSVAAAL 199
258654698 119 VFDEIRQGALDAQVQDGLAEAFGVPAAAVQRAAMLLGSTATAARLLQTQGLPGLQSVGLQVGVPVRPMLAAAAPDPAAAV 198
296270402 120 LAGELRQGALEGVMIEAIAAAAEVPAQEVRRALTLRGSLPAVGAAALRGGVAALREFRLEVGRPVAPMLAQSAPSVTAAL 199
284031333 127 VAGELRQGALDGVMADAVAKATGIALEKIRAATMLRGAAAPVAVAALTEGEAGLAQFGLEVGRGVQPMLAQSATTVAEAM 206
269957425 195 IVGELRQGALDSLLLDAVAAAADVPLAAVRRAAMFSAPSGPIARAALTGGAAALAAFRLEPGRPVRPMLASPAPDVAAAL 274
120403019 204 DRFgGTALFEAKLDGARVQIHRRGDAVSVFTRSLDDVTARLPEVVDATLALPVTELIADAEAIALRPDGRPHRFQITASR 283
302869414 200 TATgVPAMVDVKLDGIRIQVHRSGPDIAVFTRSLDEITGRLPQVVAAVRALPARELVLDGEAIGLDAAGRPLPFQETSSR 279
182440113 200 DKL-GPCAVEEKLDGIRVQVHRDGERIRAYTRTLDDITDRLPELVSAVAALHARRFVLDGELIALGEDGRPRPFQETASR 278
21219712  200 GKL-GAAAVEEKLDGIRVQVHRDGGTVRIYTRTLDDITDRLPEVTEAALALPGERFILDGEAISLDADGRPRSFQETAGR 278
290962181 200 AKL-GVCAVEEKLDGIRVQLHRDGGDVRLYTRTLDDITDRLPELTSAALGLRGERFILDGEVIAFDGNGRPRSFQETAGR 278
271968417 200 GKLgGPAAIEWKLDGVRVQAHRSGDAVSVFTRTLDDITAQVPELVEAVRALSSQDLVLDGEVIALRPDGRPEPFQVTSGR 279
258654698 199 DKSgLPALVDTKLDGIRVQVHKDGDTIALYTRTLDEITDRLPEVVRVIADLPARRLVLDGEVLALDAAGRPVAFQLIASR 278
296270402 200 EKIgGPAAIEWKFDGVRVQAHRKGGWVGVFTRTLDDITAQVPELVEAVLALPDDDLVLDGEVIALRPDGRPEPFQVTSGR 279
284031333 207 TKTgTPAAIEWKLDGIRIQVHRDGDRVVVYTRTLDDITDRAPEVVTATLELEAEQVVLDGELIALRPDGRPEAFQVTGSR 286
269957425 275 AGIgGPVAVEAKIDGIRVQLHKHGNDVAVYTRSLDDVTERLPELVALLRSLPVATAVLDGEAIALGADGRPLAFQDTAAR 354
120403019 284 FGRR-GGTPDagt---------------qrLSVFFFDLLHADGVDLLDLPTGERIATLDATVPrEQRVDRLLTSDPE--- 344
302869414 280 AARRtTPSTTgqapvapavlaaaertgepvLTPYFFDLLHLDGTDLIDAPGRERWAALAGAVDaSLLVDRIEVDDVE--- 356
182440113 279 VGSRrDVAGAaah---------------vpVVPVFFDALRVDGEDLLDRPFADRHAALARLLPdDLRVRRTVVADPDape 343
21219712  279 VGSRtDVATAara---------------vpVSAVFFDVLSVDGRDLLDLPLTERHAELARLVPePLRVRRTLVHGPEdt- 342
290962181 279 VGSRlDVATAarq---------------vpVSPVFFDALSVDGQDLLDLPFTERHAVLARLVPePMRVRRTLVTGPDdl- 342
271968417 280 VSSRiDVARVrer---------------tpLRVFFFDALRVDGVDLLDLPGEVRHAALAATVPsELVTPRLVTGDAA--- 341
258654698 279 TMT--KSPTDgpp---------------lpLTLFCFDLLHVDGRDLLDEPLSERAAVMNTVLPpSLIVPRTVAPDLA--- 338
296270402 280 VASRtDVAALrks---------------vpLSVFFFDALRVGGADLLDLPGSERHAALEAAVPaELIAPRIVTGDPD--- 341
284031333 287 TATRaATGPEtv-----------------pLTPYFFDILHLDGQDLLGLGGAERHEWLSRLVPeHRRIPRLVTDDAE--- 346
269957425 355 TGSHdADATGrv-----------------pLTAFLFDALHLAGRDLVDAPESERFAALERVAPpSALVRRIVTADPD--- 414
120403019 345 ---AAQAFLDATLAAGHEGVMAKSPTAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPATG-- 419
302869414 357 ---QAATAFAAAVDAGQEGVVVKDPAAPYDAGRRGSAWVKVKPRHTLDLVVLAVEWGSGRREGWLSNLHLGARDPRTG-- 431
182440113 344 araAADAFLAATLERGHEGVVVKDLAAAYSAGRRGASWLKVKPVHTLDLVVLAVERGSGRRTGKLSNLHLGARRPD-G-- 420
21219712  343 --gAAEEFLARTLARGHEGVVVKGLDAAYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARTAD-G-- 417
290962181 343 --pEAERFLTDTLERGHEGVVLKALDAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGRLSNLHLGARTAD-G-- 417
271968417 342 ---SGEAFFKDVVRAGHEGVVVKSLQTPYAAGRRGAGWIKVKPRHTLDLVVLAAEWGSGRREGRLSNLHLGARDPQTG-- 416
258654698 339 ---AVQAAFAGAVGAGFEGAVVKKLHAPYAAGRRDSGWIKLKPRHTFDLAVIAAEWGYGRRQGWLSNLHLAARDPRTG-- 413
296270402 342 ---EGERFFSDAIQRGHEGVVVKSPQTPYTAGRRGAGWIKVKPRHTLDLVVLAAEWGSGRRTGWLSNLHLGAYDPETG-- 416
284031333 347 ---AGQAFFADAVKRGHEGVMVKSLSVPYEAGRRGSGWVKVKQTHTLDLVVLAAEWGHGRRTGWLSNLHLGARDEQTG-- 421
269957425 415 ---EATAFFAEVLASGHEGVVVKDLAAPYDAGRRGGAWVKVKPRHTLDLVVLAVERGSGRRSGWLSNIHLGARVPGAGpd 491
120403019 420 ---GFVMLGKTFKGMTDEMLAWQTERFLELADGaapaatadhgaapaatadhgaADGFTVTVRPEQVVEIAFDGIQTSSR 496
302869414 432 ---EFVMLGKTFKGLTDELLRWQTERFLSLAVE---------------------KGDWVVRVRPEQVVEIAFDGVQTSSR 487
182440113 421 ---TFAMLGKTFKGLTDALLDWQTARLRELATD---------------------DDGHVVTVRPELVVEIAYDGLQRSTR 476
21219712  418 ---SFAMLGKTFKGMTDALLTWQTERLKELAVE---------------------EHGWGVTVRPELVVEIAYDGLQRSTR 473
290962181 418 ---AFAMLGKTFKGMTDALLAWQTERLTELAVE---------------------EHRWGVTVRPELVVEIAYDGLQRSTR 473
271968417 417 ---GFVMLGKTFKGLTDEVLAWQTERFLEIAEGp--------------------TDGWTVVVRPELVVEIAFDGVQQSPR 473
258654698 414 ---ELVMLGKTFKGLTDATLTWQTEQFLAREVR---------------------RTKSTVFVEPPLVAEIAIDGVQASTR 469
296270402 417 ---GFVMLGKTFKGLTDELLAWQTERLLRLAVGp--------------------TDGWVVTVKPELVVEIAFDGVQRSPR 473
284031333 422 ---EFVMLGKTFKGLTDELLRWQTERFQQLEVS---------------------RDAYTVYLRPEIVVEIAFDGVQTSPR 477
269957425 492 sadGWVMLGKTFKGMSDEMLAWQTARFTELADGp--------------------ADGWVVRVRPEQVVEIAFDGVQRSTR 551
120403019 497 YPGGMALRFARVLCYRDDKTAAEADTIDTVRALHER 532
302869414 488 YPGGMALRFARVLRYRDDKTAAEADTIDAVRAIHAG 523
182440113 477 YPAGVTLRFARVLRYREDKTAREADTVETVLSRQR- 511
21219712  474 YPAGVTLRFARVVRYREDKRPEDADTVDTLLAAHPG 509
290962181 474 YPAGVTLRFARVIRYREDKTPGEADTVEALLSAHPE 509
271968417 474 YPGGMALRFARVVRYRPDKNADQADTVEMVRSLML- 508
258654698 470 YPGGIALRFARVLRYRPDKTPDEVDSLDAVVALGAA 505
296270402 474 YPGGMALRFARVLRYRPDKRPEQADTVAAVRALLPR 509
284031333 478 YPAGMALRFARVLRYREDKTADQVDTVQTVRAIHQP 513
269957425 552 YPGGVALRFARVLRYRDDKPAAEADTIDAVRAIAGG 587
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