Conserved Protein Domain Family
PLN00171

?
PLN00171: PLN00171 
photosystem light-harvesting complex -chlorophyll a/b binding protein Lhcb7; Provisional
Statistics
?
PSSM-Id: 215088
Aligned: 10 rows
Threshold Bit Score: 569.435
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
168049357   1 MAASVSGSMLSYSGcsaqnsypssfahsTRQWKSklgnpfkgaevkqncgsiTRRngqlPRCRAAWQELAGVVVFSALPF 80 
115478412  12 PAPPAAVAAGSLSR--------------RRRRRR------------------AGL----APVRASWQELAGVLVFSAVPF 55 
15223108    5 QEKL-SSLSSSYSSihslpr---ilvskPRNRIA------------------VTKs--rSICRASWQELAGVLVFSAIPF 60 
225457685   5 QPCSVSSSSSSFFGgyrhrlcskiswpkSRNVNS------------------TSTy---SGCKASWQELAGVLIFSAIPF 63 
242044232   9 LHSGAPRSALPLQG--------------RRRRSL--------------------------SVRASWQELAGVLVFSAIPF 48 
224083380  12 PHVSFSASSSSFFAhqrvpr---illskSRSNSS------------------NSTslpaSICKASWQELAGVVIFSAIPF 70 
255539358   7 PHPSFSWISSSLFSqgskl-----lalkPRKILF------------------NGNp--sSPCKASWQELAGVLVFSAIPF 61 
302808391   6 LATSEACSWGKFHG--------------ARRRRA------------------PRRcrnaCSCRASWQELAGVLVFSAFPF 53 
302789319   6 LATSEACSWGKFHG--------------ARRRRA------------------PRRcrnaCSCRASWQELAGVLVFSAFPF 53 
297839529   6 QEKLSSSLSSSYSSfhslqr--iyvpepPRSRIA------------------VTRs--rSICRASWQELAGVLVFSAIPF 63 
168049357  81 TLVKAIANSSIGEQLQQRMLKTKKAAQEAAGEAREAQSNVRDESMWYREGRPKWLGPIPYDYPDHLQGEAPGDYGFDILG 160
115478412  56 TAVKALANSPLGARLRRRLDDRKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPYEYPAHLTGEYPGDYGFDIAG 135
15223108   61 TAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDSKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAG 140
225457685  64 TAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAKNESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAG 143
242044232  49 TAVKALANSPLGARLRRRLEDRKAAAAAEADALRAAARGARNNSFWYGGDRPRWLGPVPYDYPEHLTGEYPGDYGFDIAG 128
224083380  71 TAVKAIANSPLGESLQRRLEERKKLAVQQSSKFKALAQKARKESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAG 150
255539358  62 TAVKALANSPLGESLQRRLEESKKVAVKESSKFQALTAKARKESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAG 141
302808391  54 TAVKAIANSSLGKQLQERMQETKAAAENSRSAVDAARMRARDASVWFGQDRPKWLGPIPYDYPDHLQGSFPGDYGFDIAG 133
302789319  54 TAVKAIANSSLGKQLQERMQETKAAAENSRSAVDAARMRARDASVWFGQDRPKWLGPIPYDYPDHLQGSFPGDYGFDIAG 133
297839529  64 TAVKAIANSSLGESLRRRLEEKKKEAVENSSRFKAKAQEARNDSKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAG 143
168049357 161 LSRDPTAFERYFNFEILHARWAMLAALGVVIPELLDRFGGVQFSEPVWWKVGYAKLQGDTLDYLGIPGLHIAGAQGILVI 240
115478412 136 LGRDPVAFANYFNFEILHCRWAMLAALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVI 215
15223108  141 LGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVI 220
225457685 144 LGKDPVAFQKYFNFEILHARWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVI 223
242044232 129 LGRDPIAFANYFNFEILHCRWAMLAALGVVIPELLDLFGLVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVI 208
224083380 151 LAEDPVAFQRYFNFEILHARWAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVI 230
255539358 142 LSKDSVAFQRYFNFEILHARWAMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVLVI 221
302808391 134 LGKDPAKFDKFFNFEILHARWAMLAALGVVIPEVLEKFFGVKFAESVWWRVGYAKLEGDTLDYLGIPGLHIVGAQGILVI 213
302789319 134 LGKDPAKFDKFFNFEILHARWAMLAALGVVIPEVLEKFFGVNFAESVWWRVGYAKLEGDTLDYLGIPGLHIVGAQGIIVI 213
297839529 144 LGKDRLTFDKYFNFEILHARWAMLAALGALIPEVLDLTGAFHFAEPVWWRVGYSKLQGETLDYLGIPGLHVAGSQGVIVI 223
168049357 241 AFCQVILMLGPEYARYCGIEALEPLGIFLPGDVNYPGGALFDPLGLTKDAAAFEDLKVKEMKNGRLAMVAWLGFYVQALV 320
115478412 216 AICQALLMVGPEYARYCGIEALEPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 295
15223108  221 AICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAF 300
225457685 224 AICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAA 303
242044232 209 AICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAV 288
224083380 231 AFCQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEIKNGRLAMVAWLGFYIQAAL 310
255539358 222 AICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVALEELKVKEIKNGRLAMVAWLGFYAQAAL 301
302808391 214 AICQFLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLGLSKDPATFEELKVKEIKNGRLAMVAWLGFYVQALV 293
302789319 214 AICQFLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLGLSKDPATFEELKVKEIKNGRLAMVAWLGFYVQALV 293
297839529 224 AICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAF 303
168049357 321 TQKGPIDNLFDFLEDPLHQNLFAYAF 346
115478412 296 TGKGPIQNLVEHLSDPLHNNILSSFV 321
15223108  301 TGKGPVQNLVDHVSDPLHNNLIAMLQ 326
225457685 304 TGKGPVQNLLDHLADPFHNNLLSIFK 329
242044232 289 TGKGPVQNLVEHLSDPLHNNILSSFH 314
224083380 311 TGKGPVENLVEHISDPLHNNLFSTLK 336
255539358 302 TGKGPVQNLVEHISDPFHNNLLCVLK 327
302808391 294 TKKGPLENLLDHLQDPLHNNAVTSIL 319
302789319 294 TKKGPLENLLDHLQDPLHNNAVTSIL 319
297839529 304 TGKGPVQNLVDHVSDPLHNNLLAMLQ 329
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap