Conserved Protein Domain Family
PLN00016

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PLN00016: PLN00016 
RNA-binding protein; Provisional
Statistics
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PSSM-Id: 215029
Aligned: 33 rows
Threshold Bit Score: 477.269
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
242043354  22 ATSTARARGASASTSLPSSSFVGAFPRAVAARRRRRPAPARa-GVKVRAEAAKKQSVLIVntnsGGHAVIGFYFAKELLA 100
15217485    2 AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQP--KGALYVSASSEKKILIM----GGTRFIGLFLSRILVK 75 
225450527   2 ARLVVQHQNQPSFSLLPSSLSDFNGIRLTNHIQCRRKVCQP--KGALHVTASGEKKILMM----GGTRFIGVFLARLLVK 75 
224124986   3 RLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQT--KGALQVSASSSKNILIM----GGTRFIGVFLSRLLVK 76 
255542956   4 LITIQQQTQPSFSLLTSSLSSDFNGTRLHTQIQCKRRVWQA--KGALQVTASSSKNILIM----GGTRFIGVFLSRLLVK 77 
297843724   2 AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQP--KGALHVSASSEKKILIM----GGTRFIGVFLSRLLVK 75 
302795358   1 ---------------------MQATDRTRLRTQAVRRVSIV----TTASSDTPAKKILMM----GGTRFIGVYLARLLVK 51 
302792238   1 ---------------------MQATDRTRLRTQAVRRVSIV----TTASSDTPTKKILMM----GGTRFIGVYLARLLVK 51 
302798457   1 ----------MAGRLVSDFTHNGLIGNHQCRNPWHRRPQGVvtTKASLGAPERAKKILMM----GGSRFIGVYLARTLVK 66 
302801426   1 ----------MAGRFVSDFTHNGLIGNHQCRNPWRRRPQGVvnTKASLGAPERAKKILMM----GGSRFIGVYLARTLVK 66 
242043354 101 AGHAVTVLTVGDEG-SDKMKKPPFSRFSELTSAgGKTVWGDPAD---VGAAVGGASFDVVLDNNGKDLDAVKPVADWAks 176
15217485   76 EGHQVTLFTRGKSPiAKQLPGESDQDFADFSSK-ILHLKGDRKDydfVKSSLSAEGFDVVYDINGREAEEVEPILEAL-- 152
225450527  76 EGHQVTLFTRGKAAiTQQLPGESDKDYAEFSSK-VLHLKGDRKDfefVKTSLAAEGFDVVYDINGREAVEIEPILDAL-- 152
224124986  77 EGHQVTLFTRGKAPiTQPLPGESDQDYADFSSK-ILHLKGDRKDfefVKTSLAAKGFDVVYDINGREAVEVEPILDAL-- 153
255542956  78 EGHQVTLFTRGKAPiTQKLPGESDQDYADFSSK-VLHLKGDRKDfdfVKSSLSAKGFDVVYDINGREADEVAPILDAL-- 154
297843724  76 GGHQVTLFTRGKSPiAKQLPGESDQDFADFSSK-ILHLKGDRKDydfVKSSLSAEGFDVVYDINGREAEEVEPIIDAL-- 152
302795358  52 AGHEVTLFTRGKTPvTQKIASETDQEYAEYSSK-VKHIQGDRQDfdgMKSKIASAGFEIVYDINGREAVEVEPIIDAI-- 128
302792238  52 AGHEVTLFTRGKTPvTQKIASETDQEYAEYSSK-VKHIQGDRQDfdgMKSKIASAGFEIVYDINGREAVEVEPIIDAI-- 128
302798457  67 AGHEVSLFTRGKTPiTQQLAGESNEAYAEYQLR-VKHIQGDRQDfeaLKSKIGEAGFEVVYDINGREAAEVEPIVDAL-- 143
302801426  67 AGHEVSLFTRGKTPiTQQLAGESNEAYAEYQLR-VKHIQGDRQDfeaLKSKIGEAGFEVVYDINGREAAEVEPIVDAL-- 143
242043354 177 AGVGQFLFISSAGIYKPTEEPPHVEGDAVKESA---GHVAVEKYIAEQFGsSWASFRPQYMIGSGNNKDCEEWFFDRIVR 253
15217485  153 PKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSrhkGKLETESLLQSKGV-NWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
225450527 153 PNLQQYIYCSSAGVYKKSDLLPHCETDAVDPKSrhkGKLETESLLDSRGV-NWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
224124986 154 PKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSrhkGKLETESLLESRGV-NWTSIRPVYIYGPLNYNPVEEWFFHRLKA 232
255542956 155 PNLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSrhkGKLETESLLESSGV-NWTSIRPVYIYGPLNYNPVEEWFFHRLKA 233
297843724 153 PKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSrhkGKLETESLLQSKGV-NWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
302795358 129 PSLKQYIYCSSAGVYLKSDLLPHFEVDATDPKSrhkGKLDTEALLQSKGV-PWTSIRPVYIYGPLNYNPVEEWFFHRLKA 207
302792238 129 PSLKQYIYCSSAGVYLKSDLLPHFEVDATDPKSrhkGKLDTEALLQSKGV-PWTSIRPVYIYGPLNYNPVEEWFFHRLKA 207
302798457 144 PDLQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSrhkGKLDTESLLQDKGV-TWTSIRPVYIYGPLNYNPVEEWFFHRLKA 222
302801426 144 PDLQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSrhkGKLDTESLLQDKGV-TWTSIRPVYIYGPLNYNPVEEWFFHRLKA 222
242043354 254 NRPVPIPGNGMQLTNIAHVRDLSRMLSLAVEKPGAASgKIFNCVSDRAVTLSGMAKLCAAAAGADAvEIVLYDPAAAGVD 333
15217485  232 GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASR-EIFNISGEKYVTFDGLAKACAKAGGFPEpEIVHYNPKEFDFG 310
225450527 232 GRPIPIPNSGIQITQLGHVKDLAKAFLLVLSNEKASK-QVFNISGEKYVTFDGLARACAKGAGFPEpEIVHYNPKEFDFG 310
224124986 233 GRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGNEKASQ-QVFNISGEKYVTFDGLAKACAKAAGFPEpEIVHYNPKDFDFG 311
255542956 234 GRPIPIPNSGIQITQLGHVKDLAKAFIQVLGNEKASK-QVFNISGEKYVTFDGLARACAKAGGFPEpEIVHYNPKEFDFG 312
297843724 232 GRPIPVPNSGIQISQLGHVKDLGTAFLNVLGNEKASR-EIFNISGEKYVTFDGLAKACAKAGGFPEpEIVHYNPKEFDFG 310
302795358 208 GRPIPIPNSGLQITQLGHVKDLADAFVRVLDNPTAFG-QVYNISGAKYVTFAGIARACAKAGGFPTpELVHYNPKDFDFG 286
302792238 208 GRPIPIPNSGLQITQLGHVKDLADAFVRVLDNPTAFG-QVYNISGAKYVTFAGIARACAKAGGFPTpELVHYNPKDFDFG 286
302798457 223 GRPIPVPGSGLQITQLGHVKDLADAFVKVMDNPKAFN-QVFNISGSKYVTFDGIARACAKAGGFPDpEIVHYNPKNFDFG 301
302801426 223 GRPIPVPGSGLQITQLGHVKDLADAFVKVMDNPKAFN-QVFNISGSKYVTFDGIARACAKAGGFPDpEIVHYNPKNFDFG 301
242043354 334 AKKAFPFRNMHFYAEPRAAKAALGWTSSTNLPEDLKERYAEYAASGRGEKPMNFDLDDKILAAVGKAAPA 403
15217485  311 KKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ-- 378
225450527 311 KKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLT-- 378
224124986 312 KKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLIIGKSLVLQA- 380
255542956 313 KKKAFPFRDQHFFASVDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFTTDDMILGKSLVLQS- 381
297843724 311 KKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMVLSKKLVLQ-- 378
302795358 287 KKKSFPLRDQHFFTSIEKAKNDLGWSPKYGLVDGLTDSYNLDFGLGTFRKAADFSTDDMILEKLGIKVAV 356
302792238 287 KKKSFPLRDQHFFTSIEKAKNDLGWSPKYGLVDGLTDSYNLDFGLGTFRKAADFSTDDMILEKLGIKVAV 356
302798457 302 KKKAFPLRDQHFFASIDKAKQELDWTPRFNLVDGLRDSYELDFGRGKFRKEADFSTDEMILSAGRVHARV 371
302801426 302 KKKAFPLRDQHFFASIDKAKQELDWTPRFNLVDGLRDSYELDFGRGKFRKEADFSTDEMILSAGRVHATV 371
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