Conserved Protein Domain Family
PHA03263

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PHA03263: PHA03263 
Capsid triplex subunit 1; Provisional
Statistics
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PSSM-Id: 223028
Aligned: 13 rows
Threshold Bit Score: 457.926
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
82503212    2 KVQGSVDRRRLQRRIAGLLPPPARRLNISRGSEFTRDVRGLVEEHAqASSLSAAAVWRAGLLAPgevavagggsgggsfs 81 
18653876    1 MKTRDANVNKLNDSLMRLLPPPPHRVSLSRGRDFSKGVRDLLSKYV-VSTTTGVEAIKDGFLSV---------------- 63 
24943148    3 VVSSAINKVRVHRQFLGLLPATARRLNITDKDKFVRDVRGLIDDHMsSSAIGATSIWKLVTDYL---------------- 66 
10140984    6 DPRDQKNYDSLQSNLFRLIPPTTHKISLARPNGFLRGLADLVGKY--SVDGAEESLFQPGAWDA---------------- 67 
13095639    9 FKYRDDMYRKIRGDLFGLIQPTTHKINITNGQKFSKDMKQFLSRYV-TSITPGLDMFRQDVLEV---------------- 71 
9628065     6 VTPRGDSGEKLARDLLRLVPPQTHKLGTFRASELGRDLRAIVANYApKTISGHIQIFRDDFIAP---------------- 69 
9626018     2 PKVNENSFKKIEKDVLKLLPPRPHKIEISEGQKFAKSIRQALSKYV-TSVNHPIDFFSNQMLDV---------------- 64 
9631252     2 PKFNENAYKKIERDLLKLLPPRPHKINLSEGPKFAQSIKQALSKYV-TSVKNPLNFLSNQMLDV---------------- 64 
51518026    2 KVQGSVDRRRLQRRIAGLLPPPARRLNISQGAEFARDVRGLIAEHAqASSVSAAAVWRAGLLAPeaasggg-----ggsf 76 
83642898    6 GRSDERGYEALQSNLFRLMPPATHKVSLAKPNGFLRGLADIVGKY--SVNGTEESLFKVGAWDP---------------- 67 
139472854   1 MKVQAENAARLGRQVLGLLPPPTHRVSLTRGPEFARGVRDLLSKYA-ASTRPTVGSLHEALRQA---------------- 63 
139424486   2 KVQGSVDRRRLQRRIAGLLPPPARRLNISRGSEFTRDVRGLVEEHAqASSLSAAAVWRAGLLAPgevavagggsgggsfs 81 
209976844   1 ----MDRYGGLLGGFLRAVPPVQKPLSLTDGNKFREGIMSEVGKYV-STLVDPRNMMLDSFHHL---------------- 59 
82503212   82 wsGWRPPVFGDFLIHASSFNNAEATGTPLFQFKQSD--PFSGVDAVFTPLSLFILMnhgrgvAARVEAGGGLTRMANLLY 159
18653876   64 --SPTCQTYGDFLIYSQTMSSQEPRGTYLFSFKQTD--TGSSIDMLFTPTSLARLS------RMDADSAPQTNRIACVWY 133
24943148   67 ---PNRSVYSDFLIQASSFNNAEVIGSPLFLFKQTD--PYSAVDIIFTPLSLFLLFdg--lcNDGVGHYAGTKRMASLMY 139
10140984   68 --PYVQPAFFDFLVHAKTISKHEPVGVPLFCFKNNS--TAPSIDVLFTPISFHAAV------GLPADVDPNVHRVAHIWY 137
13095639   72 --PYRQPLYGEFLVGSSTLSNNEPLGCMLFLFKQED--NGSSIDSLLTLTSLFKIS------GAGAGASEWMFKIANVWY 141
9628065    70 --PYRQPLYGEFLVHAKTFHPQEPRGTFVFAFSVGDgpECTSVDTIFSPVSLFRVC------GLGADAAPHTHRISHIWY 141
9626018    65 --PFRQPLYADFLIQAKTIHQKEPIGSFLFTFKQED--SGSSIDIIFSPVSFYKIS------GLDAEFAPSVHRISFVWY 134
9631252    65 --PFRQSFYADFLIQAKTIHQKEPIGSFLFNFKQED--NGSSIDTIFSPISLYKIS------GLDAEFAPSVHRISFVWY 134
51518026   77 gwGWRPPVFGDFLIHASSFNNAEPPGTPLFQFKQSD--PFSGVDAVFTPLSLFILMnhgrgeAARVEAGGGLTRMANLLY 154
83642898   68 --PFFQPNYADFLVHAKTISKHEPRGAVLFCYKDNT--AQPAMDVLLTAISFRAAV------GLPADLDPNVHRVAQNWY 137
139472854  64 --PFRQPTYGDFLVYSQTFSPQEPLGTFLFSFKQED--NGSSMDMLLTPTSLFMLS------GMEAAKAPQTHKVAGVWY 133
139424486  82 wsGWRPPVFGDFLIHASSFNNAEATGTPLFQFKQSD--PFSGVDAVFTPLSLFILMnhgrgvAARVEAGGGLTRMANLLY 159
209976844  60 --KHNKSLQGSFLVHAGTVSDQEVCGTPMFCYKDGL--SNPEIDRLLTPISLTRLT-------VPNNENSDVFRIGNIIY 128
82503212  160 DSPATLADLVPDFGRLVADRRFHNFITPVGPLVENIKSTYLNKITTVVHGPVVSKAIPRSTVKVTVPQEAFVDLDAwlsg 239
18653876  134 GHESGLLDAIPNFEELLETGSLHQFLAPVGPLVQTVHSTFVTKVTSALKGNVVAREPVVTHIGLTLPSDMFVDLDD---- 209
24943148  140 DSQSSMMELVPNLETLVNSRSFHTFLTPVGPLVENIKSTFLNKITSVIYGPSVTKNPPMESVRIKFPAESFIDLDAwlgg 219
10140984  138 GDDSEVSSLMEDLNILLEESNLHTRLHPVGILVENNDSSFLNRVTALTHGPAYMSRK-QAALKLVIPTDLFVDLDAr--- 213
13095639  142 GQESNLEDMIPNIQQLIQDGLFHTHLTPVGPMIQNIQSTFVNKITSVVKGEVLSKDPPQQNIKLVVPVDLFLDVDA---- 217
9628065   142 ESESDFLNVAANVRELIENCSLHKFLSPVGPLVQNIQSTFLNKITTVVKGEVLSNRSPPENIKLVLPSDLFFDMDE---- 217
9626018   135 GADNCIEDTVPNLAELIEEGKFHQFLTPVGPLVENITSTFVTRIKSVVKGEVLNNKSPPENVKLLLPSDLFIDLDE---- 210
9631252   135 GTDNCIEDTVPNLAELLEEGRFHKFLTPVGPLVENINSTFITRIKSVAKGEVLNNKSPPENIKLVLPSDLFLDLDE---- 210
51518026  155 DSPATLSDMVPNFGGLVADRRFHAFLTPVGPLVENIKSTYLNKITTVVHGPVVSKAIPRSTVKLTVPQEAFVDLDAwlsg 234
83642898  138 GEDTEVRSLIDDLDYLVEESNLHTRLRPVGVLVENNDSSFISRVSALTHGASYISSS-QTAVNLVIPLDMFVDLDSt--- 213
139472854 134 GSGSGLADFIPNLSELMDTGEFHTLLTPVGPMVQSVHSTFVTKVTSAMKGVGLARDEPRAHVGLTLPCDMLVDLDE---- 209
139424486 160 DSPATLADLVPDFGRLVADRRFHNFITPVGPLVENIKSTYLNKITTVVHGPVVSKAIPRSTVKVTVPQEAFVDLDAwlsg 239
209976844 129 SEDSGLFDIIPTLRTRLMERNLHEGLVFVGPLIKNINSSFVNKITTAIKGDTVLNESLSHGLVLKLPVEQFMDFETt--- 205
82503212  240 ga----gggggvCFVGGLGLQPCPADARLYVALTYEEAGPR----FT-FFQSSRGHCQIMNILRIYYSPSIMHRYAVVQ- 309
18653876  210 ------------SCPSSLRDEPLPAHSSIYVCLTYIRVNNRpalgLG-FFKSGKGYCEIAAQLRDFYSGVIRTKYIQLQn 276
24943148  220 ic-----htvsgPDSSEFGHCPHPSNARLLAAITYEQSGPKl-----mFFRSYRGLTQVMNALRLYYSPGIMHRYAVTA- 288
10140984  214 ------------LNVEAYGAQPSGGTSTVFCTLVYTRCGNDikpaLT-FFKSNKSDFDVLTLIRAYYADLITNKLEVNQ- 279
13095639  218 ------------MTHQGVTLLPSRLHVCYYFVITYVIQENTpimlLH-FIKSNKALSQLVLQLKLVYGDAIRHKFVRQQq 284
9628065   218 ------------TCPYPPSGDPVKPRVCYYVCILYVMVNNIpsasLQ-FFRTGKGASDVVFFLRRYYSDAIANKITVLGd 284
9626018   211 --------------PNIDTLAPKHLLSFYYACVTYPVLHNVpvmaLT-FIKSNKSIRDLFCHLKVIYSDIIRTKYIAMQn 275
9631252   211 --------------SITDTSAPRHLLSFYYACVTYPVLHNVpvmtLT-FIKSNKSIRDIFCHLKVIYTDVIRTKYIDMQk 275
51518026  235 ggapgvgeggcgGGAGGLAPRPCPADARLYVALTYEEAGPR----LT-FFQSSRGRCQIMNILRIYYSPSIMHRYAVVQ- 308
83642898  214 -----------sCGDWGSGRQPRSDMSTVYCSLVYMLRGNDvkpaLT-FFKSSKSTFEVLSLLQTYYRDLITNKVMSNH- 280
139472854 210 ------------SCPMVQRREPAGLNVTIYASLVYLRVNQRpsmaLT-FFQSGKGFAEVVAMIKDHFTDVIRTKYIQLRh 276
139424486 240 ga----ggggggCFVGGLGLQPCPADARLYVALTYEEAGPR----FT-FFQSSRGHCQIMNILRIYYSPSIMHRYAVVQ- 309
209976844 206 ------------NTFHYTGRLPMTHRSYIYYALGYVITADGtqslLQkFFRTPIEGPEFTRLVRDYFAGEIRNFFLGDNd 273
82503212  310 PLHIEELTFGAVACLGTFSATDGWRRSAFNYRGSSLPVVEIDSFYSNVSDWEVIL 364
18653876  277 DLYINRLAFGVVCRLGSVPSGLQPSFQSLHFKGAALPVLKFTEFVSNPGSWKLFL 331
24943148  289 NPDINGLIYGAFVSLGTVSASDIGRKDSLNYKGSSLSVVVFDNFIARSSDWTVII 343
10140984  280 QCNINGLKFGVMCTVGYTDSSHSINQQSLCIRGSSLLVTSISNFFVNYTGWRVFA 334
13095639  285 DFYINRMTFGALCRVGYSSTSSDTNYKNLQFKGSSLPVVEIPDFISDPGPWTVFL 339
9628065   285 NLDINNLTLGAVCMLGYSSSQSTPGRGNLHFRSYSLPTVEVSDFVAQPGSWTLI- 338
9626018   276 DFYINKMSFGALCKLGSSSSETVPRRGNYHFRGSSLPTVEVPDFVADPGPWMTIL 330
9631252   276 DFYINKMTFGALCKVGSSSSETVPRRGNYHFRGSSLPIVEVPDFVADPGPWMTIL 330
51518026  309 PLHIEELTFGAVACLGTFSATDGWRRSAFTYRGSSLPVVEIDSFYSDASDWEVIL 363
83642898  281 QFSINGSKFGVWCSIGTTASDQPVTQQSITVRGNSLLVACIPSFFVDISGWQVFA 335
139472854 277 ELYINRLVFGAVCTLGTVPFDSHPVHQSLNVKGTSLPVLVFANFEAACGPWTVFL 331
139424486 310 PLHIEELTFGAVACLGTFSATDGWRRSAFNYRGSSLPVVEIDSFYSNVSDWEVIL 364
209976844 274 FGQGNFLMFGAVCRCGYFPEDSLLTRTRVSIKGGGLSLIEIPDFTVSRGPWQFI- 327
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