Conserved Protein Domain Family
PHA03235

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PHA03235: PHA03235 
DNA packaging protein UL33; Provisional
Statistics
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PSSM-Id: 223017
Aligned: 5 rows
Threshold Bit Score: 593.712
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
20026636    1 MDTLLHNVTNRSGGIPHVRDACNQTETLQAIRTTEAFLNLLIILVGGPLNAVVLVTQLLSNHVHGYSTPTIYMTNLYSTN 80 
213159183   5 ECFSVYPNNKDENDLLHVNDTCPRTESLNMARNVEVFFNVLIISVGGTLNLIVLFTHILANRIHGFSTAAMYLTNLCISN 84 
9845324     2 DVLLGTEELEDELHQLHFNYTCVPSLGLSVARDAETAVNFLIVLVGGPMNFLVLATQMLSNRSYSVSTPTLYMTNLYLAN 81 
14251021    2 DVLLARDEYVGDDSFLHVNDSCVPSDGLRLARITETCINLLVISVGLPLNLLVFVVQVLANRVNPFSTPALYMTNLCLAN 81 
52139219    1 MDTIIHNTTNRSTDTPHVNITCNITEPLSAIRTTEAVINTFIIFVGGPLNAIVLITQLLTNRVLGYSTPTIYMTNLYSTN 80 
20026636   81 FLTLSILPFIVLSNQHLLGTNVASCKFLSVIYYSSCTVGFATVALIAADRYRVIHRRTYARQS--YRSTYVILLITWLMG 158
213159183  85 LLTIFSLPYIMMQNFSYMSGSTLTCKFVTLLYYASCTNGLMTLAWISMDRYRIINQRVRKDSSa-LKNTYKIMGATWFAS 163
9845324    82 LLTVATLPFLMLSNRGLVGSSPEGCKIAALAYYATCTAGFATLMLIAINRYRVIHQRTRSGAGs-KRQTYAVLAVTWLAS 160
14251021   82 LLTVGVLPFLILSNWGYLSGTAGGCKFASLLYYTSCTVGFATVALISVDRYRVIHRRKQNSSRriYHRTYLILGLTWFIA 161
52139219   81 FLTLTVLPFIVLSNQWLLPASVASCKFLSVIYYSSCTVGFATVALIAADRYRVLHKRTYARQS--YRSTYIILLLTWFAG 158
20026636  159 LIFSTPAAVYTTVVAHDDKNdtmnasdtsngsdtnNTNASYHTCVMYFVADEVYTVLMSWKVLLTVVWGVAPVVMMTWFY 238
213159183 164 LLCAGAAPMFTTLINHDNVD---------------PENPDYQTCVTYFRFDQIHTLLSGFTALVTIVWGIIPVMVMSWFY 228
9845324   161 LMCASPAPLYATVMAHDSAD-----------------ALAFETCIIYFSYDQVKTVLATFKILITMIWGITPVVMMSWFY 223
14251021  162 MCCSAPAPIYTTVLAHDDLP---------------IGARGHETCIIFFAHDLVKPVLGTFKVLLCLVWGLAPVTMMTWFY 226
52139219  159 LIFSMPAAVYTTVVIHNGTNg--------------QSSNGHATCVLYFIADEVYTVLLSWKVLLTLVWGAAPVIMMTWFY 224
20026636  239 TFFYYTVRRTAQKKKSRTLTFVSVLLLSFVILQTPYVSIMIFNSYATGKWSLECQHQTLRLTVSTLSRLVPNLHCLINPI 318
213159183 229 TFFYRTLKRASCKKRNRTIAFICILLCSFLCLQVPFTLLMMYETYVTIIWKSDCADINALKVLHYVSRLIPNMHCLLNPI 308
9845324   224 VFFYRRLKLTSYRRRSQTLTFVTTLMLSFLVVQTPFVAIMSYDSYGVLNWPINCDTINKRDAVSMLARVVPNFHCLLNPV 303
14251021  227 LVFYRTLRQVSYRKRSRTLMFICILLLCFLLLQTPFVAVMAFDSYALLSWDVECENTNYRDAVSVIARVVPNLHCLANPV 306
52139219  225 AFFYSTVQRASQKQRSRTLTFVSVLLISFVALQTPYVSIMIFNSYATAAWPMDCEHLTLRRTIGTLSRLVPHLHCLINPI 304
20026636  319 LYALLGNDFLTRLRQCIRGQLFDRRAFLRSQQQHGGTTDAAgttqllptsptsgatsehgkTSSGTKPARVKRGQTF--- 395
213159183 309 LYAFIGNDFITRLKECFRGELFNRRQYIQSHSKCDNSKIST--------------------LPRPTRQSKIKRSKSIetl 368
9845324   304 LYAFLGRDFNKRFILCISGKLFSRRRALRERAGLGAQIVGPvcalps--------ktvtlsEETRDLSQEIRRLRAL--- 372
14251021  307 LYAFLGNDFLKKFGQFRRGELFSRKAFAQARQANPSAASQH--------------------ATVGAHRQTIRRGQHL--- 363
52139219  305 LYALLGHDFLQRMRQCFRGQLLDRRAFLRSQQNQRATAETNlaagnnsq-----svatsldTSSKNCNQHAKRSVSF--- 376
20026636  396 --------------------NVPGDTPKSRPKTTCRQHGVSLGQRLSQSHHNLSLG 431
213159183 369 knarisrceltvpneqnvfsSLPNAKKQNKPSARDAQNDTDNATSLTKTEFLSMRV 424
9845324   373 --------------------GRPPPPPPPPPPPNC--------------------- 387
14251021  364 --------------------IE---------------------------------- 365
52139219  377 --------------------NFPSGTWKGGQKTASNDTSTKIPHRLSQSHHNLSGV 412
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