Conserved Protein Domain Family
PHA03101

?
PHA03101: PHA03101 
DNA topoisomerase type I; Provisional
Statistics
?
PSSM-Id: 222985
Aligned: 27 rows
Threshold Bit Score: 346.2
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
9964366     1 MKKKYNNTYKIIEEKIYNTDGQEivDDNLLNIIKKYKPPKHLNNIELIAKNIEEADNGIIYIGIDSKNKKQYIYGINYVK 80 
157939700   1 MKGLYYNNGKLFEDKEFTIFVSS--DNPTYEILKKVKIPSYLTDVIVYEQTYEESLTKLVFVGSDSKGKRQYFYGKLHIK 78 
115531770   2 KRFLFYLEGVLYYDADRTRRVED--SNPTYDVVARVKIPAHLTDVAFVEQTLEESARGLIFIGYDSKSRKQYFYGKLHVE 79 
38229239    1 MKGLYYNDGKLFEDKELTMSVSS--DNPAYEILKKIKIPSYLTDVVVYEQTYDESLNRLIFVGSDSKGKRQYFYGKLHVK 78 
40556127    4 KQILYYKEGKLYYDNAYKKRVPI--SNPTYEILKRYKIPTYLKDIIIYEQTYEEALNSLIFVGIDSKGRKQYFYGKNHIL 81 
41057125    1 MRALHLSDGKLFFDKELTQPVPD--DNPAYAVLAKIRIPPHLSDVVVYEQDLESAQQGLIFVGRDAKGRKQYFYGRGHVE 78 
41057498    3 ARALFLSKGKLFFDKDFSQPVPD--DNPAYEVIANIRIPPHLTDVVVYEQTLEDAHQGLIFVGKDSKGRKQYFYGRDHVR 80 
9634813     4 KVFFHYKDDKLYYDAAYKNLVPA--SNKTYEIIKAYRVPPHLKEVIVYEQSLEEASNSLIFIGVDSKGRKQYFYGKNHVI 81 
12085060    1 MKGLYYNNGKLFEDKEFTIFVSF--DNPTYEILKKVKIPSYLTDVIVYEQTYEESLTKLVFVGSDSKGKRQYFYGKLHIK 78 
9629019     2 KRFFFYKDGELFHDRKCTRRVSR--SNATYEVLRHVRIPAHLHDVRVLEQTYEQAQRGLVFVGLDSKQRAQYFYGKLHVQ 79 
9964366    81 KRRNDRIKIFLKVENKIPKIEKYINKELnifKKngsnsshiYITDKMIFAIILLVEMCFFIRTGKKKYLEDNETIGLLTL 160
157939700  79 QRNDNRNNIFINVYNVIGKINCFINNNIs-nKE--------QNTVNFQLAVLMLMETSFFIRMGKMCYLKENKTVGLITL 149
115531770  80 QRNHSRDEIFLRVHKVKHEIDAFVERNLr-fSR--------KATVENQLAVFLLLETSFYIRTGKVRYYKNNETVGLLTL 150
38229239   79 QRNDNRNNIFVNVYGVIDNINRFIDGNIt-sKK--------KNDTNFQLAVLMLMETSFFIRMGKMRYLKENKTVGLITL 149
40556127   82 LRNKNRDLIFIKVHKIIKHINSYIDKNIk--LY--------TDKLKFQLAVFMLMETSFYIRLGKIKYYKQNNTVGLLTL 151
41057125   79 RRTAVRNAVFVRVHRVMHKINAFIDDHL---AS--------GSEAEAQMAAFLLMETSFFIRVGKTRYERESGTVGMLTL 147
41057498   81 RRTAVRNAVFVRVHRVMEKINAFIDSHL---AS--------GSESNAQMAAFLLMETSFFIRIGKTRYEKESGTVGMLTL 149
9634813    82 LRNKNRDKVFIKVHKIIKKINNYIDKNIc--SE--------SNTLEFQLAVFMLMETSFYIRIGKVKYYKQNDTVGLLTL 151
12085060   79 QRNDNRNNIFINVYNVMGKINCFINNNIs-nKE--------QNTVNFQLAVLMLMETSFFIRMGKMCYLKENKTVGLITL 149
9629019    80 RRHERRDAIFVRVFGIMDGLRRFIDRHLdspEA--------ARDSKTQLAIFLLMETSFYIRTGKMRYFRENETVGMLTL 151
9964366   161 QKNNFTIEN--DVIYINFKGKLSQNQNFSILKDEHllIYNMIKILYNKT--NDFIFKNsddiiFNESKLYSMIKQFNIKL 236
157939700 150 KNENIIVKN--NKILIKFTGKDKIIHEFVVYKSNR--LYYPLLKLVNKKnpNDFLFNK-----LNEKKVYDFIHKFNIKI 220
115531770 151 QNKHIAVDP--REIRIAFRGKDRVDHCFRIDRADR--LYGPVKALHDQKrpDAFVFGL-----LNEARVYAFMKRYGVRI 221
38229239  150 KNENIIVNN--DKILIKFTGKDKVVHEFVVYESNR--LYNPLLNLVNEKnpNGFLFNK-----LSEKKVYEFMRKFNIRI 220
40556127  152 QNKHLTITD--DNINIKFSGKDKVVHEFNIKKENR--LYEPLIKIYDPTkpDSVLFSM-----LSEKKVYNFISQFSIKV 222
41057125  148 RNKHLAEAEggEEIRVAFVGKDRVAHEFAVREGQR--LFAALRRLWDPGapDRLLFDR-----LSERRVYTFMRRFGIRV 220
41057498  150 RNKHLSLTEggEEMRVKFVGKDRVAHEFAVRDGQR--LFAALRRLWDPGapEQLLFDR-----LSERRVYAFMRRFGIRV 222
9634813   152 QNKHLTVTD--ENITIKFTGKDKVVHAFNVKKENR--LYEPLLRIHDFSkpDSVLFSL-----LSEKKVYSFIKQYSIKI 222
12085060  150 KNENIIVKN--NKILIKFTGKDKIIHEFVVSKSNR--LYYPLLKLVNKKnpNDFLFNK-----LNEKKVYDFIHKFNIKI 220
9629019   152 KNRHLHEED--GLLAIRFVGKDQVTHEFRVHAEDR--LYVPLMRLRDADapEAFLFSR-----LSERVVYRFLRTFGVRV 222
9964366   237 KDIRTFGVNRVLIQELWKNVRDLDIMdirhKDIKKIISEVVKRTANIIGHTPTISKNSYIVDEIRSIID-KDTINKAKEM 315
157939700 221 KDLRTYGVNYTFLYNFWSNVKSINPL----PSTKKLISMTIKQTAEIVGHTPSISKNAYMANTVIELLQkSDILKTIKSI 296
115531770 222 KDLRTYGVNVTFLFNIWYNVNTLETL----PSVKKLISVSLNQTADVIGHTANISKRAYVTLTVLRVLTtQVVEEVIRDR 297
38229239  221 KDLRTYGVNYTFLYNFWSNVKSINPL----PNTKKLISMTIKQTAEIVGHTPSISKNAYMANTVIDLLQkSDILKTIREI 296
40556127  223 KDLRTYGVNITFLYNIWNNVLSMLTI----PSIKKLISLSIKQTADTIGHTPNISKQAYMAITVLDLMKeENIIETIKQK 298
41057125  221 KDLRTYGVNYTFLYNFWSNVRSLEPR----PSVKSLICTSVRQTAETVGHTPSISRSAYMATAVLELVRdGAFLDRVAAT 296
41057498  223 KDLRTYGVNYTFLYNFWSNVRSLDPR----PSAKALICASVRQTAETVGHTPSISRSAYMATAVLELVKdGTFLDRVAAT 298
9634813   223 KDLRTYGVNITFLYNIWNNVISMLKL----PSIKKLIVLSIKQTADTIGHTPNISKQAYMAITILELMKeENITETIKQK 298
12085060  221 KDLRTYGVNYTFLYNFWSNVKSINPL----PSTKKLISMTIKQTAEIVGHTPSISKNAYMANTVIELLQkSDILKTIKSI 296
9629019   223 KDLRTYGVNVTFLSSLWTNVKELPAL----PSARKLVALSIRQTAEAIGHSPHIARQAYMALTVLELARdASVFEHIRTL 298
9964366   316 -TFDEYYKYIVDKLKELTN 333
157939700 297 -DFNQFMDLVIDYVKNIKS 314
115531770 298 -PFENFLEFVISYIEHGRQ 315
38229239  297 -DFNEFMNLVIGYVKNKKI 314
40556127  299 -TFEEFLSYVIDYVNKKKI 316
41057125  297 dTLDDFVDIVVDYVNNSEQ 315
41057498  299 dSLDDFVNSVVDYVNNSEV 317
9634813   299 -TFDEFLNFVINYVNKKKI 316
12085060  297 -DFNQFMDLVIDYVKNIKS 314
9629019   299 -SRDEFLAFIVDYVKRRAR 316
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap