Conserved Protein Domain Family
PHA03080

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PHA03080: PHA03080 
putative virion core protein; Provisional
Statistics
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PSSM-Id: 222972
Aligned: 25 rows
Threshold Bit Score: 418.303
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
18640140    2 IDQQKQSVIYNIISKSIIKSTTRYLTINNEYIESKSKQLCYCNNQSYKESIINNIYLCLEHDITLTDLNHLLNILLNLKK 81 
40556086    1 MEEQKQSRIFNIVSKSLVETLLQGL-MDDKAIASIVSRAKYIYNSSNKDTIINSIYQKCESEVSIPTIAGVKSLLDKTNN 79 
41057480    6 AASRAGGRIFDSLLRFIVTGATAGCLTDTADIEAKARLLPGSSPAR-RAQIANIIHDRCIANTRVTSRQDLADALARLRR 84 
41057107    6 QAPRAGARVFESLLKFVVRGAACGCLSSTVDIEAKARLLPGSSPQR-RAQIANAIHDLCIANVRVTTREDLVEALARLRR 84 
62637443    1 MIEPKQSAIYTIVSKAIVKSVVKDTNINSEYIENKAKQLCYCNNMSYKESIINNIYSYLEHEINMDDISHLNQILNNLKH 80 
9628997     1 MTEPRQSELFNIVARALACAVLRDVVKDVAYVAGKARHLCYCGSAARRDAAVNSIYAKCESELALNSPEQLRAVLARLRR 80 
12085040    1 MIEQKQSVIFPIISKAIVKSVTGDIKFNKDYIDNKAKQLCYCNNLSYKESLINSIYTSFEHEINISDANHLIKILKNLKP 80 
9634790     1 MEDQKQSRIFNMVSKSLIETLLKDY-LDDKAIAGIVARAKYIYNSSNRDSIINSIYQKCESDISIPTIAGVKSLVDKTRN 79 
157939680   1 MIEQKQSVIFPIISKAIVKSVTGDIKFNKDYIDNKAKQLCYCNNLSYKESLINSIYTSFEHEINISDANHLIKILKNLKP 80 
211956337   1 MIEPKQSAIYNIVSKAIVKSVVKDTNINSEYIENKAKQLCYCNNMSYKESIINNIYSYLEHEINVNDISHLNQILNNLKQ 80 
18640140   82 YSMYVCNITEFWRLYNSLYRFTHCLSFFNTCMPTIVATLATLITMVMTNKLLYAAEMVESIETYLFLSQKHPSQELADLL 161
40556086   80 YGRHVQDESEFNELRNILTRLTHNKSFFITCNYLINTTVATLLTLILGNQLIHAAKIVSEIETYLFDPKKRPISEISDLL 159
41057480   85 RFVHAGGSPDLLRLHGALLRFTHCNSFFMVCRPTIQVTLATLIAYVLVGELMQAVDMVDAVERVVFRKNRPMASELADLL 164
41057107   85 RFVHAGNSADLARLHGALMRFTHSTSFFAVCTPTVRVTLATLVASVLVGELMQAVDMAEAVERVIYTKNRPMASELADLL 164
62637443   81 QSMYVCNTNEFWRLYNSLTRFTHCKSFFTTCMPTIITTLSMFITLILSNKLLYAAEMVEYIETYLFSSQKNLSQELADLL 160
9628997    81 YAPYVHDTGEFWRLHDSLRRFTHCSSFFAVCMPTIVASMATLLTLVLANQLLAAAEIVEEVEGYLFDGGKPLARELADLL 160
12085040   81 QSVYVCNSSEFWKLYNSLYRFTHSKSFFSTCNVTIIATLSTLLTLILSNKLLYAAEMVEGIEEYLFNLQKPPLQDLADLL 160
9634790    80 YERHVQDEIEFNELRNILTRLTHNKSFFITCNYLINTTAATLLTLILANQLIHAAKIVMEIENYLFDSKKRPSSEVSDLL 159
157939680  81 QSVYVCNSSEFWKLYNSLYRFTHSKSFFSTCNVTIIATLSTLLTLILSNKLLYAAEMVEGIEEYLFNLQKPPLQDLADLL 160
211956337  81 QSMYVCNTNEFWRLYNSLTRFTHCKSFFTTCMPTIITTLSMFITLILSNKLLYAAEMVEYIETYLFSSQKNLSQELADLL 160
18640140  162 DMKYGLINLVQYKIFPIMIGSKEll-pnQSMQLFSAGSN----SSDYSSEVNKIMELPVKTDSIINVYNFLSDKGINTSN 236
40556086  160 EMKYAILKFAQYKIFPIVTGYKD-------LETVAGGKV-----MSFSDEISMILDMPLKSPNLDQMYKIMSDNGM-FLD 226
41057480  165 ELKYGLINLAQYKLIPGLLEEAG-----CCEDVVRAGAPagaaEDMAEMEAERLLEMPVRSGALSRLCDFLVQRGTPTSH 239
41057107  165 ELKYGLVNMAQYKLMPALMEEAG-----CCDELVRAGAPdactDSVAEMEAERLLDMPVRSSALSRLCDFMVRRGASPVH 239
62637443  161 DMKYALINLVQYKIFPIILGNKDs---aMTPIIFSAGSS----NIDYRDDIDKLLNLPVKSDMIQAVYAFLTKKGINTSN 233
9628997   161 DMKYGLVNLVQYKILPMVLGARD----------ECAGASa--sAAGLTAEVEQLLELPVRAGAVEEVYRHLLRSGVPAAN 228
12085040  161 DMKYGLINLVQYKIFPLLLGNKNsysnnDTREIFFGGFSn--pPLEYNCEIEKLLELPIKTNIISDVYDYLTKQGINTFN 238
9634790   160 DMKYAILKFAQYKIFPILTGQQD-------IETIAGGKV-----MSFSEEIDIIIDLPLKSPKLDKMYKTICEIGL-CKD 226
157939680 161 DMKYGLINLVQYKIFPLLLGNKNsysnnDTREIFFGGFSn--pPLEYNCEIEKLLELPIKTNIISDVYDYLTKQGINTFN 238
211956337 161 DMKYALINLVQYKIFPIILGNKDs---aMTPIIFSAGSS----NIDYRDDIDKLLNLPVKSDMIQAVYAFLTKKGINTSN 233
18640140  237 NYAEYVAGLKIEEITNtdattcn----------------------------emqqqdVIKKPLRATIQPLTIQEQNAMKA 288
40556086  227 TYAEYIAGLRIQEVTE------------------------------------------TDTSTTDNNSANNQLANYIANN 264
41057480  240 AQSEYMAGLKIEELPA---------------------------------------------DAPVAEHAVEEQNSALAKL 274
41057107  240 AASEFAAGLKIEEMPAd---------------------------------------aDSAAAAPVPAPAAADFGSVVART 280
62637443  234 NFAEYVAGLKIEELSEnnnide-----------------------------qkndetSKEDKQIISIQPLTQEERNSMYA 284
9628997   229 NYAEYVAGLKISELVErappgnctgmgeevgsgagtgvstgngadskavvsassqapVRAPPGALAAALRRVAAAATQED 308
12085040  239 NYAEYVAGLKIEEVNSdtq------------------------------------tkMEDNKPLITIQPLTKQEINSMQA 282
9634790   227 TYPEYIAGLKIEEVGE-----------------------------------------------EAENTVKNQLATYIANN 259
157939680 239 NYAEYVAGLKIEEVNGdtq------------------------------------tkMEDNKPLITIQPLTKQEINSMQA 282
211956337 234 NFAEYVAGLKIEELSEnnnide-----------------------------hkndepNKEDKQIISIQPLTQEERNSMYA 284
18640140  289 LDVLNIAEKKHKGHILDGRITSPITNTNSVADLIPFTASDMEKFAVLEYLYIMRIMANNIKKKNNSDNRi--QGITLNIN 366
40556086  265 NKILDMAYKYSRGHELDGAVTSPLS-----EDRILLTNNDLRKFAILDYLYTIRVLANCIKRKKSSKPKk--PGTTLTIN 337
41057480  275 SAVMDSAARYERGAVLDGAVTSPLG----AVGQSPFDGVTLQRFVLLEYLHIMKLLANCISQRSSG------EKIRIAVN 344
41057107  281 EDLLERARKESRGEVLDGAVSSPLG----VAGSSPFDGITLEKFVLLEYLHVMKMLANCIEQRSCK------ERIRVSVN 350
62637443  285 MKLLKDAQKYSKGNVLDGSISSPIT-KKSIINQIPFSASDIEMFAILEYLYIMRVIASNIKRKNLDCKN---QGITLNIS 360
9628997   309 RQLLESAQRYSRGHVLDGAVTSPLS--GEEQNLIPLSMSDIHKFMILDYLYTIRVLANCVKQKNARARSkkgPGVTLTIN 386
12085040  283 IKILKEAQKYSKGHTLDGAVTSPITKNETISSYIPFSSSDMAKFTLLEYLYMMRVMANSIKKKNGNLKC---QGITLNIN 359
9634790   260 NKVLDMAYKYSKGHDLDGAVISPIT-----EDRIRLTNNDLRKFAILDYLYTIRVLANCIKKKKSFKTKk--PGTTLTIN 332
157939680 283 IKILKDAQKYSKGHTLDGAVTSPITKNETISSYIPFSSSDMAKFTLLEYLYMMRVMANSIKKKNGNLKC---QGITLNIN 359
211956337 285 MKLLKDAQKYSKGNVLDGSISSPIT-KKSIINQIPFSASDIEMFAILEYLYIMRVIASNIKRKNLDCKN---QGITLNIS 360
18640140  367 S-PFKSITVPGLNSVK 381
40556086  338 S-PYKIVTVPNN---- 348
41057480  345 TcPFKTTTAAPTPAPA 360
41057107  351 TqPFRTTSATPTPVDP 366
62637443  361 S-PFKSITIPGVNSIK 375
9628997   387 S-PFKIITVPGKEVTR 401
12085040  360 S-PFKSITIPGTYPTK 374
9634790   333 S-PYKIVTVPSN---- 343
157939680 360 S-PFKSITIPGTYPTK 374
211956337 361 S-PFKSITIPGVNSIK 375
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