Conserved Protein Domain Family
PHA02563

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PHA02563: PHA02563 
DNA polymerase; Provisional
Statistics
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PSSM-Id: 222879
Aligned: 15 rows
Threshold Bit Score: 482.353
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
31072015    7 YLKSFKGQKVTSVDLYCDIETATINKNSGQkhastyhsf----tyslavsyfKTGEEFPSVVVFNHFKQLFDFIEks--k 80 
62327524   20 MSTTNRKKRREIKLFTLDTETRGLDGDVFR----------------------IGLFDGKQYYTXYTFADVLPVFE----- 72 
38640281    2 MTTTNRKKRREIKLFTLDTETRGLDGDVFR----------------------IGLFDGKQYYTGYTFADVLPVFE----- 54 
22855149    1 ---------MPRKMFSCDFETTTKLDDCRVway-----------------gyMEIGNLDNYKIGNSLDEFMQWVM----- 49 
9629529     1 ----------MTCYYAGDFETTTNEEETEVwlsc--------------fakvIDYDKLDTFKVNTSLEDFLKSLYldldk 56 
9626351     1 -MPRRSRKKVEYKIAAFDFETDPFKHDRIPkpfs---------------wgfYNGEIYKDYWGDDCIEQFIYWLDti--- 61 
12248109    1 ---------MARSVYVCDFETTTDPEDCRLwaw-----------------gwMDIYNTDKWSYGEDIDSFMEWAL----- 49 
157738596   4 LECMQYHKNQRKMILYWDIETLSYNKINGRnkptlyknvtysvaigwyngyeIDVEVFPSF--EAFYDDFFKYVYrrdti 81 
194186874   1 ---------MPRKMYSCDFETTTKVEDCRVway-----------------gyMNIEDHSEYKIGNSLDEFMAWVL----- 49 
151266296  11 ARGGVRRSHKKVPSFCADFETTTDEDDCRVwsw-----------------giIQVGKLQNYVDGISLDGFMSHIS----- 68 
31072015   81 IRKSI---EFRLIFHNgAKYDNHFMVSeiqrdidnvrlfnqtikqvnhitdldlskkqgkqmrndvnmvlERRVRSSNNL 157
62327524   73 KYKAY---DCHVYIHN-LDFDLSKIIA-------------------------------------------ELRDYXEPTF 105
38640281   55 KYKAY---DCHVYIHN-LDFDLSKIIA-------------------------------------------ELRDYAEPTF 87 
22855149   50 ---EI---QADLYFHN-LKFDGAFIVNwlehhg--------------------------------fkwsnE---GLPNTY 87 
9629529    57 TYTETgedEFIIFFHN-LKFDGSFLLS--------------------------------------------FFLNNDIEC 91 
9626351    62 ------eePHVIYAHNgGKFDFLFLMK--------------------------------------------------YFR 85 
12248109   50 ---NS---NSDIYFHN-LKFDGSFILPwwlrng--------------------------------yvhteEDRTNTPKEF 90 
157738596  82 TKSKT---NIIMIAHNcNKYDNHFLLKdtmryfdnitrenvylksaee-nehtikiqeatilaknqnvilEKRVKSSINL 157
194186874  50 ---KV---QADLYFHN-LKFDGAFIINwlerng--------------------------------fkwsaD---GLPNTY 87 
151266296  69 ---ER---ASHIYFHN-LAFDGTFILDwllkhg--------------------------------yrwtkE--NPGVKEF 107
31072015  158 DGDMWIYGRHYEMVDSY---------RKTNVSIELCGRMLlnnglideQYLKTDFEYD------------------KYDL 210
62327524  106 NTSLFINGXIVTFTASH---------IIVHDSFRLLPSSL--------ENLCRDFDLLeggkmdivdymeennygiYNVK 168
38640281   88 NNSLFINGNIVTFTASH---------IILHDSFRLLPSSL--------ENLCRDFDLLeggkmdivdymeennygiYNVK 150
22855149   88 NTIISKMGQWYMIDICFgykgkrklhTVIYDSLKKLPFPV--------KKIAKDFQLP------------------LLKG 141
9629529    92 TYFINDMGVWYSITLEFpd-----ftLTFRDSLKILNFSI--------ATMAGLFKMP------------------IAKG 140
9626351    86 GKLKIVNGRILEVEHGI---------HKFRDSYAILPVPLaa----sdEKIEIDYGKM---------------------- 130
12248109   91 TTTISGMGQWYAVDVCIntrgknknhVVFYDSLKKLPFKV--------EQIAKGFGLP------------------VLKG 144
157738596 158 DLTMFLNGFKFNIIDNF---------MKTNTSIATLGKKLldggylteNQLKTDFNYT------------------IFDK 210
194186874  88 NTIISRMGQWYMIDICLgykgkrkihTVIYDSLKKLPFPV--------KKIAKDFKLT------------------VLKG 141
151266296 108 TSLISRMGKYYSITVVFetg----frVEFRDSFKKLPMSV--------SAIAKAFNLH------------------DQKL 157
31072015  211 DTDLTWHEVRKYREFIFNDLDEKQMKYIHND--------VIILALTCKHYSKLFYGFDFEKqtftqnikeeyanyNDMAK 282
62327524  169 NRKLNKRLTKGNFFTTVDKDDPVLCEYMEYDcrslykilEIVIGLSKLEVEQFINCPTTAS--------------LAKTV 234
38640281  151 NRKLNKRLTKGNFFTTVDKDDPVLCEYMEYDcrslykilEIVIGLSKLEVEQFINCPTTAS--------------LAKTV 216
22855149  142 DIDYHAERPVGHEIT------PEEYEYIKNDi-------EIIARALDIQFKQGLDRMTAGS--------------DSLKG 194
9629529   141 TTPLLKHKP--------EVIKPEWIDYIHVDv------aILARGIFAMYYEENFTKYTSAS--------------EALTE 192
9626351   131 ------------ERETREQHKAEILEYLKGDc-------VTLHKMVSLFIAEFGMRLTIGG--------------TAMNE 177
12248109  145 DIDYKKYRPVGYVMD------DNEIEYLKHDl-------LIVALALRSMFDNDFTSMTVGS--------------DALNT 197
157738596 211 DNDMSDSEAYDYAVKCFDNLTSEQLTYIHND--------VIILGMCHIHYSDIFPNFDYNKltfslni-mesylnNEMTR 281
194186874 142 DIDYHKERPVGYKIT------PEEYAYIKNDi-------QIIAEALLIQFKQGLDRMTAGS--------------DSLKG 194
151266296 158 EIDYEKPRPIGYIPT------EQEKRYQRNDv-------AIVAQALEVQFAEKMTKLTAGS--------------DSLAT 210
31072015  283 FQLLKQIgdnmtGKHLKlTDYFIQGQNAYDYFKNYYNGGLNlyndKYIGKKLVRDGfSIDLNSSYPTVMYKEKLPT-FLV 361
62327524  235 YKEQYKKdykvaISTKQ-YNHKQLGKGLEAFIRKGYYGGRT----EVFTPRIENGY-HYDKNSLYPYVMKMAEMPVgYPN 308
38640281  217 YKEQYKKdykvaISTKQ-YNHKQIGKGLEAFIRKGYYGGRT----EVFTPRIENGY-HYDKNSLYPYVMKMAEMPVgYPN 290
22855149  195 FKDILS------TKKFN-KVFPKLSLPMDKEIRRAYRGGFTwlndKYKEKEIGEGM-VFDVNSLYPSQMYSRPLPYgAPI 266
9629529   193 FKRIFRK-----SKRKFrDFFPILDEKVDDFCRKHIVGAGRlptlKHRGRTLNQLIdIYDINSMYPATMLQNALPIgIPK 267
9626351   178 LKQF--------------HPYDPVRKGFDEAMRPFYFGGRCq---AFEKGIIEDDIkVYDVNSMYPHAMRNFRHPFsDEF 240
12248109  198 YKEMLG------VKQWE-KYFPVLSLKVNSEIRKAYKGGFTwvnpKYQGETVYGGM-VFDVNSMYPAMMKNKLLPYgEPV 269
157738596 282 FQLLNQYq---dIKISY-THYHFHDMNFYDYIKSFYRGGLNmyntKYINKLIDEPCfSIDINSSYPYVMYHEKIPTwLYF 357
194186874 195 FKDIIT------TKKFK-KVFPTLSLGLDKEVRYAYRGGFTwlndRFKEKEIGEGM-VFDVNSLYPAQMYSRLLPYgEPI 266
151266296 211 YKKMT-------GKLFI-RRFPILSPEIDTEIRKAYRGGFTyadpRYAKKLNGKGS-VYDVNSLYPSVMRTALLPYgEPI 281
31072015  362 MVDSKPTDLKNIGSTDGDYMVFFNMLMEDVNDQILSRIKSN-------VIKSAIVKYWRVKDGYVWLNNVMISLIeeith 434
62327524  309 VLDNEEAELSFDLWKRRRYGAGFIHAKVHVPEDMYIPILPKkdytgklIFPVGKIEGVWTFPELALAEAEGCKIE----- 383
38640281  291 VLDNEEAELSFDLWKRRKYGAGFIHAKVHVPEDMYIPILPKkdytgklIFPVGKIEGVWTFPELALAEAEGCRIE----- 365
22855149  267 VFQGKYEKDEQYPLYIQRIRFEFELKEGYIPT---IQIKKNpffkgneYLK-------NSGAEPVELYLTNVDLEliqeh 336
9629529   268 RYKGKPKEIKEDHYYIYHIKADFDLKRGYLPT---IQIKKKldalrigVRTSDYVT--TSKNEVIDLYLTNFDLDlflkh 342
9626351   241 YEANEITEETY-----------FIEWEGENNGAVPVRTKTGldfnqrsGIFHTSIHEWRAGIDTGTIKPNRIIRTi---- 305
12248109  270 MFKGEYKKNVEYPLYIQQVRCFFELKKDKIPC---IQIKGNarfgqneYLS-------TSGDEYVDLYVTNVDWElikkh 339
157738596 358 YEHYSKPTLIPTFLDDDNYFSLYKIDKEVFNDEVLIKIKSR-------VLRQMIVKYYNNDNDYVNINTNTLRMIqditg 430
194186874 267 VFEGKYVWDEDYPLHIQHIRCEFELKEGYIPT---IQIKRSrfykgneYLK-------SSGGEIADLWLSNVDLElmkeh 336
151266296 282 YSEGAPRTNRP--LYIASITFTAKLKPNHIPC---IQIKKNlsfnptqYLE--------EVKEPTTVVATNIDIElwkkh 348
31072015  435 qkfnnlHVQSFSVFECHHFGARDIIAKNYFIKTQGKMSKALnctmetidplnieltdkdkpkeydfshemveGSKVLLNG 514
62327524  384 ------KIESGVVFEKTAPVFREFISYFEEIKNTSKGAKRA-------------------------------FSKLMQNA 426
38640281  366 ------KIESGVVFEKTAPVFREFISYFEEIKNTSKGAKRA-------------------------------FSKLMQNA 408
22855149  337 yemynvEYIDGFKFREKTGLFKEFIDKWTYVKTHEKGAKKQ-------------------------------LAKLMFDS 385
9629529   343 ydatimYVETLE-FQTESDLFDDYITTYRYKKENAQSPAEKq------------------------------KAKIMLNS 391
9626351   306 -------------NFTETTTFGAFIDHFFSKRDAAKKAGDLfh---------------------------niFYKLILNS 345
12248109  340 ydifeeEFIGGFMFKGFIGFFDEYIDRFMEIKNSPDSSAEQs-----------------------------lQAKLMLNS 390
157738596 431 idcthiRVNSFVVYECEYFHARDIIFQNYFIKTQGKLKNKInmttpydyhitde------inehpysneevmLSKVVLNG 504
194186874 337 ydlynvEYISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQ-------------------------------LAKLMLNS 385
151266296 349 ydfkiySWNGTFEFRGSHGFFDTYVDHFMEIKKNSTGGLRQ-------------------------------IAKLHLNS 397
31072015  515 IYGIPALRAYf---------DCYR-------RDENGQLYNVSNGFENKERN-----------------------IVFSAG 555
62327524  427 LYGKFAMQRE----------RIMY-------ADISERDKLEAEGHTVSEIIydmngirmefleydgyamaeyiqPHISAY 489
38640281  409 LYGKFAMQRE----------RIMY-------ADISERDKLEAEGHTVSEIIydmngirmefleydgyakaeyiqPHISAY 471
22855149  386 LYGKFASNPDvt-------gKVPY-------LKEDGSLGFRVGDEEYKDPVy----------------------TPMGVF 429
9629529   392 LYGKFGAKIIsv-------kKLAY-------LDDKGILRFKNDDEEEVQPVy----------------------APVALF 435
9626351   346 SYGKFAQNPEnykewcitegGIYLegydgegCEVQEHLDYILWGRPAEMFNyf--------------------nVAVAAS 405
12248109  391 LYGKFATNPDit-------gKVPY-------LDENGVLKFRKGELKERDPVy----------------------TPMGCF 434
157738596 505 LYGIPALRSHf---------NLFR-------LDENNELYNIINGYKNTERN-----------------------ILFSTF 545
194186874 386 LYGKFASNPDvt-------gKVPY-------LKENGALGFRLGEEETKDPVy----------------------TPMGVF 429
151266296 398 LYGKFATNPDit-------gKHPT-------LKDN-RVSLVMNEPETRDPVy----------------------TPMGVF 440
31072015  556 VTAFAVRNLLLPLGKLTQDeiddyFWYADTDSLymdkRALPKLPKSMFHKMNLGGWDIEHANISTFYaFNHKKY---CLY 632
62327524  490 ITSIARILLFKGLKYAHEKg---iLAYCDTDSC----ATTTKFPDKMVHDKEYGKWKLEGYVIEGLY-FQPKMYaekAIN 561
38640281  472 ITSIARILLFKGLKYAHEKg---iLAYCDTDSC----ATTTKFPDKMVHDKEYGKWKLEGYVIEGLY-FQPKMYaekAIN 543
22855149  430 ITAWARFTTITAAQACYDR-----IIYCDTDSIhltgTEVPEIIKDIVDPKKLGYWAHESTFKRAKY-LRQKTYi-qDIY 502
9629529   436 VTSIARHFIISNAQENYDN-----FLYADTDSLhlfhSDSLVLD---IDPSEFGKWAHEGRAVKAKY-LRSKLYi-eELI 505
9626351   406 ITGAARSVLLRALAQAERP------LYCDTDSIicrdLKNVP-----LDAYQLGAWDLEATGDKIAI-AGKKLY---ALY 470
12248109  435 ITAYARENILSNAQKLYPR-----FIYADTDSIhvegLGEVDAIKDVIDPKKLGYWDHEATFQRARY-VRQKTYfieTTW 508
157738596 546 VTSRSLYNLLVPFQYLTESeiddnFIYCDTDSLymksVVKPLLNPSLFDPISLGKWDIENEQIDKMFvLNHKKY------ 619
194186874 430 ITAWARYTTITAAQACYDR-----IIYCDTDSIhltgTEIPDVIKDIVDPKKLGYWAHESTFKRAKY-LRQKTYi-qDIY 502
151266296 441 ITAYARKKTISAAQDNYET-----FAYADTDSLhligPTTPP-DSLWVDPVELGAWKHESSFTKSVY-IRAKQY------ 507
31072015  633 DDDDNEIVvrc---------ggISKALIKKWIaESRNNID------------------YFI-----------NNFFIDGV 674
62327524  562 TDGEYEEV--------------LRMKGVPKWVvEEQLDYN------------------SFRkwylqvkrgkaEIPIYKGG 609
38640281  544 TDGEYEEV--------------LRMKGVPKWVvEEQLDYN------------------TFKkwylqvkrgkaEIPIYKGG 591
22855149  503 AKEVDGKLiecspdeatttkfsVKCAGMTDTI-KKKVTFD------------------NFRvgfss--tgkpKPVQVNGG 561
9629529   506 QEDGTTHLd-------------VKGAGMTPEI-KEKITFE------------------NFVigatf--egkrASKQIKGG 551
9626351   471 AGDNCVKIaskgaslvprdigfLMPPDMEPKAaKKVAQQKakniggekilkvanggvyDFVnd--------aPSFKLNGN 542
12248109  509 KENDKGKLvvcepqdatkvkpkIACAGMSDAI-KERIRFN------------------EFKigyst--hgslKPKNVLGG 567
157738596 620 AYEVNGKIk-------------IASAGIPKNAkNTSVDFE------------------TFV-----------REQFFDGA 657
194186874 503 MKEVDGKLvegspddytdikfsVKCAGMTDKI-KKEVTFE------------------NFKvgfsr--kmkpKPVQVPGG 561
151266296 508 AEEIGGKLd-------------VHIAGMPRNV-AATLTLE------------------DMLhggtw--ngklIPVRVPGG 553
31072015  675 TIPATRAIRNEWNTITIYDGTSELKKGGVYYKKYDTNLlqnieselaKLKDAILTEESETSLD---YSE 740
62327524  610 ERVQKFLTKSKNNIEMNELAEMHKTINFAREQKRNIDLnknitsplvRNDYGENKDEKSEYEFdewYER 678
38640281  592 ERVQKFLTKSKNNIEMNELAEMHKTINFAREQKRNIDLnknttsplvRNDYGENKDEKSEYEFdewYER 660
22855149  562 VVLVDSVFTIK---------------------------------------------------------- 572
9629529   552 TLIYETTFKIRETDYLV---------------------------------------------------- 568
9626351   543 VQFIKRTIKGT---------------------------------------------------------- 553
12248109  568 VVLMDYPFAIK---------------------------------------------------------- 578
157738596 658 IIENNKSIYNNQGTISIYPSKTEIVCGNVYDEYFTDEL---------NLKREFILKDARENFDhsqFDD 717
194186874 562 VVLVDDTFTIK---------------------------------------------------------- 572
151266296 554 TVLKDTTFTLKID-------------------------------------------------------- 566
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