Conserved Protein Domain Family
PHA00435

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PHA00435: PHA00435 
capsid assembly protein
Statistics
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PSSM-Id: 222792
Aligned: 18 rows
Threshold Bit Score: 335.267
Created: 9-Dec-2010
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
194473832   9 YAQFGVNNSVVTSg--SVSEHEQNMLSLNVAARDGDDAIELAEVepvdptSDDPYAgltdkfaseEDDNGYMQirvgqdt 86 
82793119    1 MPYSHLTNAVVSG---ELTEHEQAMIAAPVAVRDGDDAISIELP------SEEPEV---------EQEEAQLE------- 55 
30387486    9 YASFGVNSAVMSGg--SVEEHEQNMLALDVAARDGDDAIELASDev--etERDLYDnsdp--fgqEDDEGRIQvrig-dg 81 
9634033     9 YASFGVNNAVMTGs--TPTEHEQNMLSLDVAARDGDDAIVLSEEps--shNDDPYAsgvdpfaegEDDEGRIQvris-ed 83 
9627468     9 YASFGVNSAVMSGg--SVEEHEQNMLALDVAARDGDDAIELASDev--etERDLYDnsdp--fgqEDDEGRIQvrig-dg 81 
77118197    6 YAEFGVSSNAITGsveDLNEHQKSMLEQDVAVRDGDDAITFKQLe-------------------aENEEATEEdenveet 66 
29366728    5 YAEFGVNGAVMSSn--NITEHEQNMLALPTSVRDGDESIETIDPetevelGTE------------QDQETDVEv------ 64 
17570824    9 YASFGVNNAVMTGs--TPTEHEQNMLSLDVAARDGDDAIVLSDEpt--shNDDPYAagvdpfadgEDDEGRIQvris-ed 83 
194100396   9 YASFGVNSAVMSGg--SVEEHEQNMLALDVAARDGDDAIELASDev--etERDLYDnsdp--fgqEDDEGRIQvrig-dg 81 
189427231   9 YASFGVNNAVMTGs--TPTEHEQNMLSLDVAARDGDDAIVLSEEps--shNDDPYAsgvdpfadgEDDEGRIQvris-ed 83 
194473832  87 iTSEDELAQEGDENVDNVEESvadsgkeaVEFEALGETPEDLTKAATSLNSHEQGFQSMVEKAVADG-LPAESIQRMYDE 165
82793119   56 -DEPEVEQQEGESESEEGEAE--------SELEIPDVDPKDITEAGAALTEAQEGQKALIEQAVKNG-LDAALIPAMEAE 125
30387486   82 sEPTDVDTGGEGFEGT---E----------EFTPLGDTPEELVAASEQLGEHEEGFQEMINIAAERG-MSAETIEAIQRE 147
9634033    84 gSEAEFDTGSDNAEVETEGEA--------AEFEPLGDTPEELSQVTEQLGQHEEGFQAMVEQAVERG-LSAESVTRIYEE 154
9627468    82 sEPTDVDTGEEGVEGTEGSE----------EFTPLGETPEELVAASEQLGEHEEGFQEMINIAAERG-MSVETIEAIQRE 150
77118197   67 eGAEDNESDDEESETDGEQP----------EFVELGDAPKELTESVTALDENEAAFDDMVSSAVEAGkVTADEITAIKAE 136
29366728   65 -TDNEAGDGENDAAEEGSET----------EFTPLGEPDAELVESSRQIDEYAEGFSQMREQAIKAG-LSAEVADQIEAE 132
17570824   84 gNEAGFDTDGDNSEVETEGED--------VEFEPLGDTPEELSQVTEQLGQHEEGFQAMVEQAVERG-LSADSVSRIYEE 154
194100396  82 sEPTDVDTGEEGFEGTEGSE----------EFTPLGETPEELVAASEQLGEHEEGFQEMINIAAERG-MSVETIEAIQRE 150
189427231  84 gNEAEFDTGSDNAEVETEGEA--------AEFEPLGDTPEELSQVTEQLGQHEEGFQAMVEQAVERG-LSAESVTRIYEE 154
194473832 166 Y-KEGGLSEESYAELAKVNFTREFIDSYIQGQEALIDQYASSMVEYVGGNEKFAALMQHLqATDMTAFNSLDEALETRNI 244
82793119  126 FeEHGKLSEGSYEALAAAGYSRQFVDSYIKGQQAIVTKFVESVVEYAGGREVFAKIQEAM-AENQSLGAAFNAAIERNDI 204
30387486  148 YaEDEELSAESYAKLAEIGYTKVFIDSYIRGQEALVEKYVNSIVEYAGGRERFDALYSHLeTHNPEAAQSLDNALTNRDL 227
9634033   155 Y-EADGISEKSYAELEAAGYSRAFVDSYISGQEALVDQYVNQVVAFAGGKERFSAIHTHLeATNPAAAESLETAMMNRDL 233
9627468   151 YeENEELSAESYAKLAEIGYTKAFIDSYIRGQEALVEQYVNSVIEYAGGRERFDALYNHLeTHNPEAAQSLDNALTNRDL 230
77118197  137 YaKDGKLSDASYAKLQEAGYTKRFVDSFVRGQEALAEQYAAGVVRYAGGAEQFNRILSHLeSNDPSTREALEAAIVRKDI 216
29366728  133 YeRDNQLSEASLKALEAVGYSRGFVRSFINGQEALANTYVAQIQAYAGGPEKFQAILSHLnATSKDAVASLEKAIESQDL 212
17570824  155 Y-EADGISEKSYAELEAAGYSRAFVDSYISGQEALVDQYVNQVVAFAGGQERFSAIHTHLeATNPAAAESLESAMMNRDL 233
194100396 151 YeENEELSAESYAKLAEIGYTKAFIDSYIRGQEALVEQYVNSIVEYAGGRERFDALYSHLeTHNPEAAQSLDNALTNRDL 230
189427231 155 Y-EADGISEKSYAELEAAGYSRAFVDSYISGQEALVDQYVNQVVAFAGGKERFSAIHTHLeATNPAAAESLETAMMNRDL 233
194473832 245 DLAKSLLNLAGQSYNLKFGKAAKRSVTKRAVQ--TKVTAPKVQGFTSQAEMIKAMSDKRYRDDAAYRHEVEQKVAYSRF 321
82793119  205 VTIKALIDSGKVTLRSKFGVKPKRDLTVSAKPaaQKPAAQKVEPFANRQEMVKAMSDKRYARDAAYRAQVEARVIASSF 283
30387486  228 ATVKAIINLAGESRAKAFGRKPTRSVTNRAIP--AKPQATKREGFSDRSEMIKAMSDPRYRTDANYRRQVEQKVIDSNF 304
9634033   234 ATVKAIINLAGESYTKKFGKPANRSVTKRATP--VKPVARQKEGFTNQAEMIKAMSDPRYRSDAAYRQMVEQKVIDSSF 310
9627468   231 ATVKAIINLAGESRAKAFGRKPTRSVTNRAIP--AKPQATKREGFADRSEMIKAMSDPRYRTDANYRRQVEQKVIDSNF 307
77118197  217 ATTKALLNLAGKTLGKAVGVKPQRTITTQAKPv-VAPKAPQTEAFSSKADMIKAMSDPRYLRDAKYTMEVRAKVAASSL 294
29366728  213 HAIKTIINLGMASHTKKFGKTPQRSVTKRAPAspAAARKSTVEGFASQREMIAAMSDKRYQDDASYRAQVEARVGASSW 291
17570824  234 ATVKAIINLAGESYTKKFGKPANRSVTKRATP--VKPVARQKEGFTNQAEMIKAMSDPRYRSDSAYRQMVEQKVIDSSF 310
194100396 231 ATVKAIINLAGESRAKAFGRKPTRSVTNRAIP--AKPQATKREGFADRSEMIKAMSDPRYRTDANYRRQVEQKVIDSNF 307
189427231 234 ATVKAIINLAGESYTKKFGKPANRSVTKRATP--VKPVARQKDGFTNQAEMIKAMSDPRYRSDAAYRQMVEQKVIDSSF 310
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