Conserved Protein Domain Family
PHA00148

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PHA00148: PHA00148 
lower collar protein
Statistics
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PSSM-Id: 222778
Aligned: 6 rows
Threshold Bit Score: 189.778
Created: 9-Dec-2010
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
22855159   15 WSQYETGLSMAEKIEkgrpklFDFQYPIFDES--YRKVFET-------------HFIRNFYMREIGFETEGLFKFNLETw 79 
9629536     1 MTGRLDGLAVDENGE------FLHYNTIIDQT--YNELFKDmelvngvsdnfkkEFCKHFYNREIGLETFARFQIALEE- 71 
12248118   15 ATQFDNKLTRNEKIEegrkklFDFFYPI-ETD--YKKEFET-------------KFIKHFYFREIGFETEGRFKFALEEw 78 
151266302  14 LTNDHIGLD---------------NYPIFDES--YRKTLND-------------RIKREYWLQEIAHETIDIFIWRMSLr 63 
168983488  57 DLSFDDHISQKEMIEksmpdiFNNITLTFNNTelITDEIKS-------------MFIKRFWNKRLGMPTIAQWQGELEY- 122
194186885  15 WSQGETGLSTAEKIEkgrpklFDFNYPIFDES--YRTIFET-------------HFIRNFYMREIGFETEGLFKFHLETw 79 
22855159   80 lIINMPYFNKLFESELIKYDPLENTRLNTTGNKKndterndnrdttgsmkadgksntktsdktnatgsskedgkttGSVT 159
9629536    72 -VLNNECFNLFKYLAEIRNKAIKDLNQSMNIDTV------------------------------------------GNQK 108
12248118   79 lNLNMPYWNKIIESTHLDYNPLYNVDYKKDSDLIrnldqvdnrvtdskienngkassesnvitsekgeansiqdadRNST 158
151266302  64 mDLIMPRYNRMYLAELQNTDPLEGNRHysrtgqdgrsq----------------------------nsginhqtgsGSGT 115
168983488 123 ------YFMEECKNALIQNYLLSTINIDDFLDgg-----------------------------------------sVSGS 155
194186885  80 lMINMPYFNKLFESELIKYDPLENTRVGVKSNTKndtdrndnrdvkqdltsngtsstdakqndtskttgnekssgsGSIT 159
22855159  160 DDNFNRKIDSDQPDSRLNLTTNDGQGTLEYASAIEENNTNNKRNTTGTNnvtssaesestgsgtsdtvttdnantttndk 239
9629536   109 ADGQALQIANTTPQERKEIVFTERYGVIEYADNLVENHQKNNADTKSNV------------------------------- 157
12248118  159 AK--KKRMFEDTPDGRLDIVNDN--NIIQYATDLTQEDSTDSVKDKIKNdssskndstgnttaegktnnit--egnnvdd 232
151266302 116 NESKGRTVGSDTPQTRLA-------GDGDYATSISDASTGGSSTSRNESdstssstsn---------------------- 166
168983488 156 NNTDSMQGNKNTPDGSTLNITHDQKMLLDRATSVVRAIGQGSSDQNTKI------------------------------- 204
194186885 160 DDNFKRDLNADTADDRLQLTTKDGEGVLEYASQIEEHNENKKRDTKTSNttdttsnttgtstldsdsktsnkanttsndk 239
22855159  240 lnsqinnvedyieskIGKSGTQSYASLvqDYRAALLRIEKRIFDEMQELFMLVY 293
9629536   158 ---------------SGWSGSSLAERL--QRNAELKDIQFQIFNICDKLFLQVF 194
12248118  233 fksekdekqklndhiYGKQGNVSYPQLikEHREAILNVERMIFDQMEELFMFVY 286
151266302 167 ------ysnnqnsesWGYSGSK--ARAiaEYRSTLLNVDDLVIRELSDLFMGIW 212
168983488 205 ---------------------AKYQAFlmAQRTSL--IDDVILQNARKLFMLIG 235
194186885 240 lnsqinsvedyiedrVGKIGTQSYARLvmDYREALLRIEQRIFNEMQELFMLVY 293
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