Conserved Protein Domain Family
IV

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PHA00019: IV 
phage assembly protein
Statistics
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PSSM-Id: 222772
Aligned: 6 rows
Threshold Bit Score: 504.732
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
9626242    6 EKKLIFGYVALCFLMTLgiAFNVLADPVNLNNAPVRSFVQWYSQKSNKAVVVNPDVKGNITVfnaDVNQANIDDFFKSVL 85 
9626321    1 MIRSIIALMLSFALVPF--AFASDRLTVKHHEIDIRVAIPLVADFCGRSVVLGPSIQGVVSL---DFDDVPCSQAFDLLL 75 
17426227   1 --MKLLNVINFVFLMFV--SSSSFAQVIEMNNSPLRDFVTWYSKQSGESVIVSPDVKGTVTVyssDVKPENLRNFFISVL 76 
9630755    1 -----MKKLLASLLCVL--SFQSFAIPVELNNAPVREFVSWYSKTTGKPVIISPDVKGEITVysaDVTKDELPQFFTSVL 73 
9625382    1 -MKTFFAKFIVALFAFT--YFSAFAEPVTLNNSPVRSFVQWYSSKTGKSVIVNPDVKGNITVfnaDVNNANIDDFFKSVL 77 
9630770   43 QSTILKSARQLLLILML--SLPAHAAPFESSDTPIAEFASWYSQQTGIKVVLGQGVLGSVSFtapDLVPAEYPAFFDSVL 120
9626242   86 NANGFVLMAGDPSGVStpsKLPSQQTDNDDDYEDSADYVPVgdsvpv-----saqpqkPLDLTVRNFKLTRVRSSDVLPL 160
9626321   76 ESNHLLSSMVGDVLVItamDQVLNSERKADDLRTFRRDLFN-----------------ANDIERRVINIVHASASEVVSL 138
17426227  77 RANNFDMVGSIPSIIQ---KYNPNNQDYIDELPSSDNQEYDdnsaps-----ggffvpQNDNVTQTFKINNVRAKDLIRV 148
9630755   74 RANGFDLSPGNPAVVQ---KFNRNTYEYSDSFSEPVPASSYdgdvppptgdfftkpeiRANLITQTYPVNNVRAKDLAPV 150
9625382   78 NANGLVVVAGNPAVVStplTKLASQPSNEETYDDESDGVAYeavpqs------aapavPADLTVRNFNVTRVRSSDVLPL 151
9630770  121 RAHGYYLVKDGNAYVI---KIAPEak------------------------------evITPAIVKLYRFNYIRNSKLSDL 167
9626242  161 AKI--------FVDSNG--GGDVIDYPGNNSLLVSGSAAIMNALADFITSIDVARDQVLIQSLMFETSlvngVDLSFAAG 230
9626321  139 FKE--------SFMSLDapGMSMTVDERTNSVFAALPSSFFPALESVIQAIDVPVRQVAIEANVVEAS----VDWSKRLG 206
17426227 149 VEL--------FVKSNTskSSNVLSIDGSNLLVVSAPKDILDNLPQFLSTVDLPTDQILIEGLIFEVQqgdaLDFSFAAG 220
9630755  151 IDI--------FLKGENiaGTKVYPLMGRIFLLVTASASQHKELAAFFPSVDVPRTQVLVESVIFETTasdgFDFSFAAG 222
9625382  152 AKI--------FVDSNG--GGNVVDYPGNNSLVVSGSAQVMPALSDFITSIDVAREQVLIQSLMFETSvsngVDLSFALA 221
9630770  168 VQStlkatsseFVKDKQvdNYSVEILPNTNALIVSGTAQQLEKLDVLLSAIDVPQRQIFIEAVITETElgdnSEL----- 242
9626242  231 SASGDKVAGGFNTSALGTALSTAG---GSFGIFNGNV-LALSIQAVKNDSNSKVISTPRILTQSGQTGYISVGQNVPFvt 306
9626321  207 LNWGGALSLGNWSAVTAGDLSVAAgssIGFGFLSNTLsLDGLFTAMENEGNGRVVSRPTLLTLDRQSASVLRGTELPY-- 284
17426227 221 SQRG-TVAGGVNTDRLTSVLSSAG---GSFGIFNGDV-LGLSVRALKTNSHSKILSVPRILTLSGQKGSISVGQNVPFit 295
9630755  223 DPSGSPVAGGINTDRLTSVLSSTG---GSFGIFNGNI-LGLSLKALETSSKSTLLSMPRILTMSGQPGTFTAGQNVPFvt 298
9625382  222 LASGGKVAGGFNTSALGTALSTAG---GSFGIFNGNI-LALSLQAVQSDSNSKVISTPRILTQSGQSGYISVGQNVPFvt 297
9630770  243 ---GVNLQAAFDKAGFVTNLVNASklkDNLFIFESGD-FNALVKAISGSSDTRLLSRPNILIMDRERGYITVGQNVPFlv 318
9626242  307 gkvtgeAANVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSLTSQMTASDI-ITNQRHMQTTVQIKDGQTLLL 385
9626321  285 ------QQSAGDGATSVAFKHAALSLEVKPVISPDNSIVIEVLVSRDSPNFSNAIDGVpPIDTNRLVTTIRVPHGQTVVL 358
17426227 296 grvtgeSANVNNPFQTIERQNVGISMSVFPVAMAGGNIVLDITSKADSLSSSTQASDV-ITNQRSIATTVNLRDGQTLLL 374
9630755  299 grvtgeAANVNNPFQTIERHDVGISLKVVPVVTPGGLLIMDVSTNADSISDSQTASDI-ITNTRSISTTVQLKSGQTVLL 377
9625382  298 gkvtgeAASVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSLSNQAIASDI-ITNQRQIQTTVQIKDGQTLLL 376
9630770  319 s---nsTTDGGTSVQRIERKDVGVSLEVTPHVMGD-DVILVINQESSSVTDSTIAADI-ITNKRTLMTTVAVKSGQTIVL 393
9626242  386 GGLIDSNTTDGNRSVPWFESVPVIGWLFRSHSDSHNERTMFVLLTAHV-IKAL 437
9626321  359 GGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPRI-LGLE 410
17426227 375 GGLTDYKNTSQDSGVPFLSKIPLIGLLFSSRSDSNEESTLYVLVKATI-VRAL 426
9630755  378 GGMVDNRESDSDSSVPWVSKIPLIGALFTSKSSNANKRTLYILIRARV-VNLL 429
9625382  377 GGLISSNQFDSDRSVPFMSKIPLIGWLFRSHSDSKDDRTMFVLLTAHV-IRAL 428
9630770  394 GGLISDEKRNVESGVPVLKDTPLIGGLFRSTSTKNVQKELRVVIKSTVfIKGL 446
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