Conserved Protein Domain Family
A

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PHA00002: A 
DNA replication initiation protein gpA
Statistics
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PSSM-Id: 222768
Aligned: 7 rows
Threshold Bit Score: 829.179
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
176120945   2 FKVHSDYFSKPNIDAIKPLVETAGMSVLTQSPNLRIWKQCNTRIKLLEEILAHYTNGIRRdDNGDFWMNpnsqlattiay 81 
9626373     8 SECHADYFDFERIEALKPAIEACGISTLSQSPMLGFHKQMDNRIKLLEEILSFRMQGVEF-DNGDMYVD----------- 75 
89888095    4 HLTASDFYRKPIIDAIKPLVETAGMSVLTQSPNLRIWKQCNTRVKLLEEILNHYTNGIRRdDNGDFFLNpecqlattiay 83 
89888608    1 MQQASDFYNKPHIDAIKPLVETAGMSVLSQSPNLRIWKQVNSRIKLLEEILAHYTNGIRRdDNGDFWMNpnsqlattiay 80 
242346742   1 ----------MATEIFSDVVKAVWSHVTAKHAHLRMAVQVDNRSRLLSDLVYQlekrl---------------------- 48 
9625356     1 ----------MATEIFSDVVKSVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQlekrl---------------------- 48 
89888662    1 ----------MASEIFSDVVKSVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQlekrl---------------------- 48 
176120945  82 rahhkGHnpkfkqypetftlddiitgkpipqtapdelQLSDEIVEDYRLTVLSIIEELQECYDVLGQLDINNTIDHKPLG 161
9626373    76 -----GH------------------------------KAASDVRDEFVSVTEKLMDELAQCYNVLPQLDINNTIDHRPEG 120
89888095   84 rahkkGHnprfkqypesftlddiitgkpipqtapselQLTDEIGEDYRLTVLSIIEELDECYNVLGQLDINNTIDHKPIG 163
89888608   81 rahqkGHnpkliqypdtftlddiirkkplpqnapdelKLSDEIGEDYRLTIISLIEEMQEIYDVLGQLDINNTIDHKPIG 160
242346742  49 ---------------------------------seetHLDGETLAVYESQTALLEDHMALVRKCAAQLDNSNTIDHRTPL 95 
9625356    49 ---------------------------------seetHLDDETLAIYESQTALLEDHMALVRKCAAQLDNSNTIDHRTPL 95 
89888662   49 ---------------------------------seetHLDDETYALYESQTGLLEDHMALVRKCAAQLDNSNTIDHRTPL 95 
176120945 162 NDHWNLLYE---------KPVYKHWYQLVSNRPLKDIRADYNYAKAKGVKDECSKILEESTMKSRRGFTVQRLMNAMRTA 232
9626373   121 DEKWFLENE---------KTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSRLLEASTMKSRRGFAIQRLMNAMRQA 191
89888095  164 NAKWDLMYE---------KPVYKHWYELVSKRPLKSIREDYNYAKAKGTKDECSKILEESTMKSRRGFTVQRLMNAMRTA 234
89888608  161 NAHWNLLYE---------KPVYKHWYELVSKRPLKSIRDDYNYAKAKGIKDECSKILEESTMKSRRGFTVQRLMNAMRTA 231
242346742  96 DAECVFLFEmicpgvrygKTLNSLWTKYVAQWPEKLIRHELDMVKPLSFKDEVAKYMEKMQEKTRKNRMTQKVINEMRIA 175
9625356    96 DAECVFLFEmicpgvrygKTLNSLWTKYVVQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNRMTQKVINEMRIA 175
89888662   96 DAECVFLFEmicpgvrygKTLNSLWTKYVAQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNRMTQKVINEMRIA 175
176120945 233 HSKGWYVVFDTLTLADDRLKDFYDNPNALRDYFRDIGRMVLTAEGRSVHDSSSDCYQYFCVPEYGTQHGRLHFHAVHLMR 312
9626373   192 HADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRDIGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMR 271
89888095  235 HTDGWYVVFDTLTLADDRIKDFYANPNALRDYFRDIGRMVLTAEGRSVHDSSSDCYQYFCVPEYGTQHGRLHFHAVHLMR 314
89888608  232 HTEGWYVVFDTLTLADDRLKDFYDNPNALRDYFRDIGRMVLTAEGRSVHDSSSDCYQYFCVPEYGTQHGRLHFHAVHLMR 311
242346742 176 HQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRSVKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVR 255
9625356   176 HQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRSVKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVR 255
89888662  176 HQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRSVKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVR 255
176120945 313 TLPLGSLHPNFGKLVRINRQINSLQNTWPYGYSMPIAVRYSQDAFSRAGWLWPVDSKGEPLKATSYMAVGFYVAKYVNKK 392
9626373   272 TLPTGSVDPNFGRRVRNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAKYVNKK 351
89888095  315 TLPLGSLDPNFGKLVRTNRQINSLQNTWPYGYSMPIAVRYSQDAFSRAGWLWPVDTKGEPLKSTSYMAVGFYVAKYVNKK 394
89888608  312 TLPLGSIDPNFGKLVRTNRQINSLQNTWPYGYSMPIAVRYSQDAFSRAGWLWPVDTKGEPLKATSYMAVGFYVAKYVNKK 391
242346742 256 TLPLGSHDPNFGRKVRNYRQINSFRGMWPYGFTQPIAVRYQHDAYSRKGWLWPVDKSGKAMQSKPYQAVAWYVTKYVAKQ 335
9625356   256 TLPLGSHDPNFGRKVRNYRQINSFRGMWPYGFTQPIAVRYQHDAYSRKGWLWPVDKTGKAMQSKPYQAVAWYVTKYVAKQ 335
89888662  256 TLPLGSYDPNFGRKVRNYRQINSFRGMWPYGFTQPIAVRYQHDAYSRKGWLWPVDKSGKAMQSKPYQAVAWYVTKYVAKQ 335
176120945 393 SDIDMAVKGLGNKEWNNSLKTKINLIPKKVFRIRMSRNFGMKLLSMAHLSAETLMELTQVGYDVTPFNNILKQNAKKELK 472
9626373   352 SDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLIQLTKLGYDATPFNQILKQNAKREMR 431
89888095  395 SDVDIAAKGLGNQKWNATLKTQMALLPKKLFRIRMSRNFGMKLLPMTTLTAECLIQLTQVGYDVTPFNNILKQNAKKELR 474
89888608  392 SDIDMASKGLGNKEWNNSLKTKINLLPKKIFRIRMSRNFGMKLHTMSHLSAETLIQLTQVGYDVTPFNNILKQNAKKELR 471
242346742 336 SDQRQKAITERQKKCKNPL---MAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPLYQIVKENAKKQLT 412
9625356   336 SDQRQKAITERQKKCKNPL---MAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPLYQIVKENAKKQLT 412
89888662  336 SDQRQKAITERQKKCKNPL---MAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPLYQIVKENAKKQLT 412
176120945 473 SRLAKKSVADVLEAQPVTTNLLKFMRNLTRTIGASNLQSFIASMTTKLTSTDISDETKNYVASAGIAVANLRIKSKWTAG 552
9626373   432 LRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVSNLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAG 511
89888095  475 LRLAKQSVADVLEAQPVTTNLLKFMRNLTRTIGASSLQSFIASMTQKLANTDISDETKNYVTNAGIAVADLRLKSKWTAG 554
89888608  472 LRLAKKSVADVLEAQPVTTNLLKFMRNLTRQIGVSNLQSFIASMTTKLTSMDISDETKNYVDTAGITATHLRIKSKWTAG 551
242346742 413 LNIGALPLHVILDVRPEVRSMLKIIRRLMKKTPEFNWQSSIASMTVTLKNGDISDEARQYIIDAGITPTDLRAKATQAFG 492
9625356   413 LNIGALPLHVILDVRPEVRSMLKTIRRLMKKTPEFNWQSSIASMTVTLKNGDISDEARQYIIDAGITPTDLRAKATQTFG 492
89888662  413 LNIGALPLHVILDVRPEVRSMLKNIRRLMKKTPEFNWQSSIASMTVTLKNGDISDEARQYIIDAGITPFDLRAKATQTFG 492
176120945 553 GK 554
9626373   512 GK 513
89888095  555 GK 556
89888608  552 GK 553
242346742 493 GK 494
9625356   493 GK 494
89888662  493 GK 494
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