3MKY


Conserved Protein Domain Family
SoPB_HTH

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pfam18090: SoPB_HTH 
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Centromere-binding protein HTH domain
This domain is found in centromere-binding protein (SopB). SopB displays an intriguing range of DNA-binding properties essential for partition; it binds the centromere to form a partition complex, which recruits NTPase (SopA), and it also inhibits SopA polymerization. The domain has a helix-turn-helix (HTH) structure and is thought to be the specific DNA-binding domain mainly through residues from the recognition helix, alpha 3, of the HTH. The domain has show structural similarity to the DNA-binding domains of P1 ParB and KorB.
Statistics
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PSSM-Id: 375543
Aligned: 3 rows
Threshold Bit Score: 44.3353
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3MKY_B    24 TSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDKE 98 
KPF54760 210 VSDLERARNYALALKDHYGNHLTRMAERLKLSKGWLSKMLRVATIPDAVVAAFASPADVQLKPGYALAQALDDKN 284
CBI38528 142 TSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDKE 216
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