2MET


Conserved Protein Domain Family
VEGFR-2_TMD

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pfam17988: VEGFR-2_TMD 
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VEGFR-2 Transmembrane domain
This is a transmembrane domain (TMD) of vascular endothelial growth factor receptor 2 which regulates blood vessel homeostasis. Transmembrane signalling by receptor tyrosine kinases (RTKs) requires specific orientation of the intracellular kinase domains in active receptor dimers. Two mutants in VEGFR-2 TMD showed constitutive kinase activity, suggesting that precise TMD orientation is mandatory for kinase activation. Scanning mutagenesis and structural analysis indicated that introducing two polar amino acids in distinct positions of the TMD (G770E/F777E and I771E/L778E mutations) reorients transmembrane helices and leads to stable dimer formation. Therefore, it has been suggested that the transition between the inactive and the active dimeric state of VEGFR-2 implicates alternative dimeric TMD conformations.
Statistics
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PSSM-Id: 375470
Aligned: 14 rows
Threshold Bit Score: 37.3183
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2MET_A          1 EKTNLEIIILEGTAVIAMFFWLLLVIILRTVKRAN 35  
NP_001265494  759 EKTNLEVIILVGTAVIAMFFWLLLVIVLRTVKRAN 793 
XP_015207223  738 DKPNIEVIILVSTGVAATFLWLMLILFIRKLKKPS 772 
XP_020835329 1004 ERSSVEVIILVCTGLAATLFWLLLTLVIRKLRKPN 1038
XP_014343277  743 EKSNLEVIILVCTGVAATLFWLLLTLFIRKLKKPS 777 
Q91ZT1        770 DKGSMEIVILIGTGVIAVFFWVLLLLIFCNMKRPA 804  Norway rat
ELW66867      723 DAGSLEMVILVGTGVVAVFFWVLLLLVFCNLRRPA 757 
Q5GIT4        768 EKMNVELIMPIGAVVIAMFLWLLIVFVIRNRKRPN 802  zebrafish
KPP64900      619 DKTNMELIIPIGAVAVAMFFWLLIVFVIRSRKRSS 653 
XP_023809654  751 EKTNVELIVPIGSVVIAMFFWLLIVFVIRGRKKSN 785 
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