Conserved Protein Domain Family
GP79

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pfam17463: GP79 
Gene product 79
This is a domain of unknown function found in Mycobacterium phage. Family members include the full Gp79 protein found in Mycobacteriophage L5. Mycobacteriophage L5, is a phage isolated from Mycobacterium smegmatis. It forms stable lysogens in M. smegmatis and has a broad host range among the pathogenic mycobacteria. L5 encodes gene products (gp) toxic to the host M. smegmatis. Expression of gp79 interferes with the cell membrane or cell-wall synthesis of M. smegmatis, leading to altered cell morphology. It also has a bactericidal effect on E. coli. The N-terminal segment of gp79 (amino acids 1-41) shares sequence similarity with the signal peptide of the D-alanylD-alanine carboxypeptidase of Bacillus licheniformis. This enzyme removes C-terminal D-alanyl residues from sugarpeptide cell-wall precursors and is also a penicillin-binding protein (PBP). The homology of the hydrophobic N-terminal part of gp79 to a PBP (penicillin-binding protein) signal peptide may indicate an interaction of gp79 with proteins or metabolites involved in the peptidoglycan synthesis of M. smegmatis.
Statistics
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PSSM-Id: 340178
Aligned: 3 rows
Threshold Bit Score: 96.8699
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q05294   22 GAMALADPyeASADPITFDQRAFPCEEDEVLGFAPEFGPDRVGCIHVDQIR 72  Mycobacterium virus L5
Q853T2   21 ALLTLAAP--ALADDRGMPQSEFPCNEDEVLGYAPRFGPDRVGCIHIDELG 69  Mycobacterium virus Omega
EKF22978 17 GVLALADDpaVAAPKVPFTQADFPCEEDEVLGYAPEFGPDHVGCIHIDALR 67 
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