3OIQ


Conserved Protein Domain Family
CDC13_N

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pfam16853: CDC13_N 
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Cell division control protein 13 N-terminus
This domain is found at the N-terminus of fungal cell division control protein 13 (CDC13). It has an OB type fold. It is involved in dimerization of CDC13 and in interaction of CDC13 with the catalytic subunit of DNA polymerase alpha, Pol1.
Statistics
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PSSM-Id: 407096
Aligned: 13 rows
Threshold Bit Score: 208.708
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3OIQ_A            4 NRIFVSSSKDFEGYP---Ska---ivPVQFVALLTSIHlTETK-CLLGFSNFerRGDQSQEDQYLIKLKF---------- 66   baker's yeast
CAR27150          4 SCLYVDSPAQIGEIVgncG-------CVRFVSLLTSVE-SRNEfYCLEMNNF--AMGTPTSIPYRPILPK---------- 63  
CCC69613          4 SCVFITSPSQFQRFP---Dsk---qiSLRFVSLLTGIKyNGKN-FILELSDF---DNNNVISPYRVKLRC---------- 63  
XP_003678640      4 QYKYITSTAAYDEFP---Les---cvAIEFVALLTSISyERTH-YLLELHNF--ADGNPDKMPFLVKVRC---------- 64  
CCF58629          5 AIKWVSSLHELEGQP---Dkt---piEIQFISVLTSVTsTCNY-YLLQLQDF-----NENNDCYKVKVRF---------- 62  
XP_003688570      4 RFQYITSSSELEVLLgldEkrkqgrfYVEFISVLTSIKyLKSSkCILKFQSF--NNNLVYESPYEVIYEC---------- 71  
EDO17978          4 ITKFVTSSSQLIDLIe--NesekanvYVEFVSLFTSLQyDSKTgFTLKFDSF--SNSTLNSSPFVVNFQE---------- 69  
XP_002552111      8 gLKYICDPLELKGFF---SegevlrqDIEFVSVLTSIDfNPKSrCLFQFSNF--RPGESVSPDYTCKITC---------- 72  
Q6CJ70            5 PYEYIPGPECLNKYY---QhgsivskPVHFISILSKVAyTKNDkCLFHFDNF--TNGKAGLNTYCGKIKN---------- 69   Kluyveromyc...
ybcl:Ecym_6438    4 NYRYISKPSELLHYY---SkeeiitqKVEFISVLTRITfSSSAdSLLYLQNF--EHGREDKVPYIARLAC---------- 68  
Q75E25            4 EYQYISRPAELLRFF---SsddivaqKVEFVAVLTRIVfTPSTsCVLMLQNF--EHGRDDRIPYVVKLPC---------- 68   Eremotheciu...
EJT42401         36 ARVFVTSTKEFERYP---Ska---ivPVQFVALLTSIHlTETK-CLLSFSNFm-GGEDPVENRYIIKLKF---------- 97  
XP_003671798      4 SCKFITSISELKKLP---Tae---kiSIRFISLLTGIKfNGSNsFLLELQDF--PNGVPALSPYRVKIKYnstndklksd 75  
3OIQ_A           67 ------------KDRGSERLARITISLLCQYFDIELP-DLDSDSgaspTVILRDIHLERLCFSSCKALYVSKHGNYTL-- 131  baker's yeast
CAR27150         64 ------------RHADSARSAKMVIELICNWYNLDIP-ELQNGI----TFIKNRIHTQCLCFLECKVLYMATPSESSQnq 126 
CCC69613         64 ------------SDENAKRLAQMTISLLCQFFDFEIP-ELRTLSd---PFFIDEIQLDRLCFINCKVIYIGKDDKYSL-- 125 
XP_003678640     65 ------------SDQFAEKLARMTISLMFQCLEIDLP-DSILDE----HTPLNDIHLESLCFVKCQCLYLSKESKYGV-- 125 
CCF58629         63 ------------NCSTSCRLARITISLIYHFFDINMyg--------kiTMDIEDMHLRKLCFVKCTATYISSKGKSAL-- 120 
XP_003688570     72 -----------------------TSDEIIKKFDLDIA------EpkgnGFIVNDCHLQRLCFVICRGACVFNGIYPVV-- 120 
EDO17978         70 ---------------PFSSDTRTKVLRLCDKFDIDLPiDFNSESp---SFSIENIYLEKLCFVNCIGRYAYNGIHPVV-- 129 
XP_002552111     73 ------------NNVETLNLTKLTLSLVSQQFDLDFP-DLNDAE----GFYMKDIHLEKLCFVCCKGTFVTCDNKGGI-- 133 
Q6CJ70           70 ------------KSFECDVLLRMVLSSLFEKLGMQIA-GLDYSS----DFVLEELEKRYMGMISVKGLFITAYDKASL-- 130  Kluyveromyc...
ybcl:Ecym_6438   69 ------------KNSEQVRLVRMVLQLLFNNFGLDIS-ISDSDP----GFDIDNIYYKRLCFVRCKGTLVTNQNKGSI-- 129 
Q75E25           69 ------------RTWEQSQLVAIVLKLLMHGFGLDTE-KVGDES----GFDLADIHIKHLCFARCRGKFITNDKNGSI-- 129  Eremotheciu...
EJT42401         98 ------------KDRSSERLARMTISLLCQYFDIEFP-DLDSRS----ALVLEDIHLERLCFSSCKALYVSKHGNYTL-- 158 
XP_003671798     76 taaateqtttteNNSSSFKLARMTISLLCQFFDIDIN-EFDINEkkkePFFIDEIHLEKICFIDCKCIYVSNGEKSSL-- 152 
3OIQ_A          132 --------FLEDIKPLDLVSVISTISTKSTNSskhssse----lisecdlNNSLVDIFNNLIEMNRDEKNRFKFVKLIHY 199  baker's yeast
CAR27150        127 pfedpylgYLESVKPLSFTQAQELALEASTDV------------------GKTIRSILQNLQLMHQNGSIGFNSNLIQQQ 188 
CCC69613        126 --------FLDDIKPIDLNNAIRIARQLQSTLe-----------------QRTILKIFDNLIKLNNESRNGFKFVKLDNY 180 
XP_003678640    126 --------YLENIKPFNAASVMDLALNHKDGHi-----------------GKTIFNIMQNLIRMDTRFTSPFKFARLNNP 180 
CCF58629        121 --------YLNDIEPIRLNDAILATKEKDPA-------------------GEKLSQLFNDLIRYEESPENEFKFTKLSGS 173 
XP_003688570    121 --------VAEDLIPLDLSQVIEMLDTFKSDNydknnylt--kdsivenkNLTVSKIFDNLIFMNAKKTEPFKFVKLEDY 190 
EDO17978        130 --------FAEKIRPISLPSVMKLLTNKTVNEt-----------------AFSLSSIFDNLINLNSNSNRSFKFVELENY 184 
XP_002552111    134 --------FLQGLRIIDIHSSLFDPTKRDERSs----------------iSETVRVIFDNLVKLNDNSKAQFKFVKLQNY 189 
Q6CJ70          131 --------QIHELKLLDLKSYFDQSTADEYKLl-----------------KPSIEKLFRNLLKREKR-NADFQFKSLTSY 184  Kluyveromyc...
ybcl:Ecym_6438  130 --------LLHEILSIDMNKELSNENVSSRKLsa--------------vdWAVLNQIVDNLVKLDKHINHEFKIKKLLNC 187 
Q75E25          130 --------LLDEILGIDIDKELRNEAAGSQRLsn--------------edWGVVNKITDNLIRLDRDSSHRFNFNNLAHS 187  Eremotheciu...
EJT42401        159 --------FLEDIKPLDRMSVINIISTDSKLSgsngslsg---pslkphlKESLTDIFNNLIKINKDEKNCFKFVKLIDY 227 
XP_003671798    153 --------YLDDVKPIDISTAIKYATQDKRQPvsttstadttndddhvirDKLISNIFNNLIMIDNDIKSDFNFVKLANF 224 
3OIQ_A          200 DIELKKF-----VQDQQKVLSQKSKAA 221  baker's yeast
CAR27150        189 QQQQQQQ-----QQQQQQLLLLQEQSE 210 
CCC69613        181 NNEFAQF-----IQEKQ-TMVNSRKKT 201 
XP_003678640    181 PKDFRRL-----IEKLK-------ANQ 195 
CCF58629        174 TSELFDF-----IENLKFNAIKSKLKd 195 
XP_003688570    191 DMRFKEV-----IQHRQLLLNDRIIKN 212 
EDO17978        185 EPKFGEF-----IQGRQQNLAVQLKLK 206 
XP_002552111    190 DTAMRKY-----IQSRQESMLSLKEKn 211 
Q6CJ70          185 CTEMQSYldslvLQEAPPTRLLPKENT 211  Kluyveromyces lactis
ybcl:Ecym_6438  188 TTKFREY-----LKFRMQRLESAHMHV 209 
Q75E25          188 TRQFIDY-----LKYRTERLTQVDLRM 209  Eremothecium gossypii
EJT42401        228 DMELKKF-----IQERQELLLQESKPK 249 
XP_003671798    225 NNELKEF-----IQERKLKLMEEKKRS 246 
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