Conserved Protein Domain Family
NPF

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pfam16601: NPF 
Rabosyn-5 repeating NPF sequence-motif
NPF is a natively unstructured but well-conserved region found in eukaryotic proteins of the Rabenosyn-5 type, wherein the sequence motif arginine-proline-phenylalanine followed by several glutamates and aspartates is repeated up to four times along the sequence. NPF lies between the two Rab-binding domains, for Rab-4 and Rab-5, at the C-terminal end of these proteins. Rabosyn-5 (or rabenosyn) is also involved in cell-polarity determination in developing wing epithelia of Drosophila, when the NPF-motif may be implicated. These NPF motifs create a region of strong positive surface potential which appear to bind Eps15 homology, EH or EF-hand, domains on proteins involved in vesicle trafficking.
Statistics
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PSSM-Id: 406900
Aligned: 15 rows
Threshold Bit Score: 175.755
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_008103530 549 SLDFREAKHSTVETGKERTNQIAQALDLDTTQNRSNPGSKTPLPCGGGKaPTRDSPIFPAQLQRIPQHDGVTGQNVTVPL 628
NP_001192629 546 SLDFREIRPFQLEPSREPRTHLAHALDLGSSPARSGTATKTSPPSSAPE-PFRGWSGPPALGQEFLPQSTASPRSEAPSL 624
XP_012664706 548 SLDFREIRPFQLQAGREPRTHLAYALDLGSSPVQSSTAPKTPSPCSAQE-PVQIWSGPPVLGQEFLPQSSISQQDEVPSL 626
XP_007500325 545 SLDFKD-KLFHWESGIDSPSQTAHILDLGPSLVRHNAVLKSPSPSSGQE-PNKEKPVFSTIAQEILQQ------NEVVSL 616
XP_003762510 545 SLDFKD-KLFQQEPGMEPQNQIAHVLDLGPSLVRNNVTFKSPSPNSVQE-PNKEKSMFPMLGQEIVKQSTGVHQNEVASL 622
XP_027323603 439 SLDFREVKQHQHEVTKENQNLIAHGLDLDSTQMKGNPGSET---TAVQQlPAKDNFIFPVKPQNVPQH--DKDQNRAACL 513
XP_004944787 543 SLDFREGKQHQYEAAKENQNLLAHGLDLDITQVKGNRSFET---TAVQQlPAKEYLIFPVRHQNTPRC--DKDQNQAACL 617
XP_002713085 548 SLDFREIGPFQLEPSREPRPHLAYALDLGPSSGQSSTAPTTSSPSPAQE-PNLVWAGPSACGQECPPQGPVSQPNEVPSL 626
ELW46963     546 SLDFREVSPFQLEPSREPRGHLAYALDLGPSPARGDVASHNPSPGSAAE-PIRVWAGRLALGQEHFPQSSVSQQNEVSSL 624
XP_001490023 548 SLDFREIRPFQREPGREPRTQLAHVLDLGSSPAQSSAAAKTLSPSSVLE-PISLWSGPPALGQEFFPQTTISQQNEVPSL 626
XP_008103530 629 NPFEN-EEVVTSLKM-EPDNPFAEDPSPVtplPIQVLHsskKEYNPFEDEDFHQAN------GAAVSAPNPFEDAAGNPf 700
NP_001192629 625 NPFDEeEDLASPSAE-DTANPPAPEPSLG---PPACVL---REYNPFEEEDEEDAVagnpftKPDGPAPNPFEEEDEHPp 697
XP_012664706 627 NPFDE-EDFSSPTEE-ATASAPATELSSG---PSAYIP---KVYNPFEEEEEEEAAaenpftHPDSPVPNPFDEEDEHPh 698
XP_007500325 617 NPFEE-EEVSSPGDE-GLTNPFAEDVSHGgcsPPSAVAsvkKEYNPFEDEEDEpv------gDANGPLLNPFEEDEQLPy 688
XP_003762510 623 NPFEE-EEISSPGNE-DFTNPFAEDVAHGgssPHSAVPsvkKEYNPFEDEEDEPPg------DADGPILNPFEV-DDLPy 693
XP_027323603 514 NPFE--DETDTPLSEeDPANPFAKDISPLisfSNAIVQsdkKEYNPFENEEDEQTN------GASVSTSNPFEE-DENPc 584
XP_004944787 618 NPFE--DDADTPLSEeDPTNPFAKDVSQPisfSNTALQsdkKEYNPFENEEEGEQTs-----GASVSTLNPFEE-DENPf 689
XP_002713085 627 NPFEE-EDLASPREE-DPTHPPTAEVSVS---PAAPVP---KEYNPFEEEEEEVVAgnp-ftSPDSPAPNPFEEEEESPh 697
ELW46963     625 NPFDE-DELPSPLDA-GPTSPPA-EASFG---LSTRVP---REYNPFEEEEEEVPGnp--ftDPDSPPPNPFDEEEEHPh 693
XP_001490023 627 NLFDK-EDLSSPTAE-GTASPLAAEPSFG---PSARIL---KEYNPFEEEEAVAGNpf---tNPDSPAPNPFDEEDERPh 695
XP_008103530 701 hspvsrqESGNPFEEspSSSMNPFEVddDDDNEVLGEDIIEEE 743
NP_001192629 698 rtpasppVPGNPFEE--APCTNPFEE--ESDGGQEGAEPIEEE 736
XP_012664706 699 prsssplVPGNPFEE--PTCTNPFEV--DSDSGPEAEELIEEE 737
XP_007500325 689 pkhssppHPGNPFEE--PASTNPFDM--E-DSEPDGEELIEEE 726
XP_003762510 694 qkhssppNPGNPFEE--PVSTNPFDI--D-DSETEREELIEEE 731
XP_027323603 585 qk--sggNSGNPFEE--GSSTNPFEV--EDGNEISEEEAIEEE 621
XP_004944787 690 qksgsnwNSGNPFEE--SSSTNPFEV--EDVSEILREEAIEEE 728
XP_002713085 698 lrpssppVPGNPFEE--PAGPNPFEV--DSDSGAEAEEPIEEE 736
ELW46963     694 qspssppVPGNPFVK--AVCTNPFET--DSDSGPEAEEPIEEE 732
XP_001490023 696 qspssppVPGNPFEE--ATCTNPFEM--DSDSAPESEEPIEEE 734
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