Conserved Protein Domain Family
DUF5054

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pfam16477: DUF5054 
Domain of unknown function (DUF5054)
This family consists of Glycosyl hydrolase family 38 proteins around 700 residues in length and is mainly found in various Clostridium and Rhizobium species. The function of this family is unknown.
Statistics
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PSSM-Id: 406792
Aligned: 10 rows
Threshold Bit Score: 313.592
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013253822           266 AASDPLKVARYRALARSIPQIRETG-----DPGERTFTRTLLLVPEHTWGMDQKRFLPDFLSWSKPAFQAARKRdlipqd 340 Sedim...
EGD78368               319 IASDPYKNTAYRALERARVSCLGSGacsaaDAVMLNFTRLLLKNPEHTWGGDVKKYLHDEDNWLNVDFHRLQYS------ 392
jgi:AciPR4_2155        294 IASDPPKLAEYRALARLRQQWIQDGrftigDATDRRFLRRFLLAVEHTWGTDTKSYL-DNDHYRPTAIVAADQQg----- 367
PRJNA63271:OPIT5_00985 270 IGTDPGKTARYRELNRLRERWTANGrlkegSAIDLRLAESLLLTAEHTWGMDIKKHLADWTHYTAKKFARVRR------- 342
WP_015734951           267 IASDPWKIARYRELLRLRDRWIEDGrldrdSEAYARFCNRLMLIPEHTWGLNNSVYLVDFVNYSSADLAAARARdivedn 346 Paeni...
CCX37250               260 VASDPYKVAAYRELLGFRDQWTASQpsapnTPQWQDLCRNLMLVCEHTWGKDSKRWFADYRNWEKHDFLEARKRdlvted 339
jgi:Closa_3207         272 IASDPVKVRGLRRLLGLKDQWKKQGsfdpdLPEFHGFLENLLMVCEHTWGLDYKKHLFDFKNWKKEDFKKARKEnrvtea 351
CCZ36422               265 AATDPLKVSAYRRLLALKEQWLQKGqitreDPAYQNLMENLLLIAEHTWGMDVKKYLLDFKNWNKKDFHQARTLdttsae 344
WP_015616661           266 IATDPYKVSVFLELLRLKHKWIKEGklekdSKIYRNFMGNLLMIPEHTWGLDFKKYMADYKNWRKQDFLKARNLdklsds 345 Clost...
CCY68487               280 AAADPYKAAALRELTALKNEWLQSGemvrsSKEYIGFTDNLMCVAEHTCGMDMKTYLGDYENYLKKDFEKARKKgvsair 359
WP_013253822           341 tlqegvls-----ytkiplsfydelkgRLSYRLFERSWKEQRGY-LEQAVAALQT--DRARDiASKALRETEPKWPDNRG 412 Sedim...
EGD78368               393 ---------------------------ADNYVQIASMWQEQRDWgLKFARQAVPTshPLTSF-ISDELAGTSPQLPSLSG 444
jgi:AciPR4_2155        368 ---------------------------LAGYARMETSWKEKRDD-LTEAISTLPS--VLQAQ-VTASLQKLDPIEPSSDG 416
PRJNA63271:OPIT5_00985 343 ---------------------------LSNFRKLETSWCEQRRY-TKTAVAALPD--SLRRE-ARAALARLRPAPFRSGS 391
WP_015734951           347 trkk-------------fdylcqqangTRSYSHYESSWQEQRDY-LEEALQSLPA--ALAAE-ARTELDRMSPQHTVLNS 409 Paeni...
CCX37250               340 allpvgkt-----lrefilsqnmiqngRCSYSTLESSWEEQRDY-VKAALEELPE--PLRAE-AKEKLLSLRPDQApq-- 408
jgi:Closa_3207         352 mfternas-----llhaicrekgaehlESSYERYESSFQEQRAY-LQEAVRLLPE--DLREE-GEQALTWDHLSKEEIWE 422
CCZ36422               345 sygcwnqsil--agmkeellhyhgdpiTSSYTAFEASHQEQRDY-LTKGMSELPP--SLLKE-AQTAMVFSYPVIPKTAV 418
WP_015616661           346 yipekydqyarfarnefkaqikhmgwkDRSYSFFESSHREQRYY-LDNAIKVLSK--DLKED-AQKAIKELT-EYPEINH 420 Clost...
CCY68487               360 hpfrdypq-----nmiialgriagcnkPANYRTIEKSWEEQREY-IKNAVCCLKG--TRKKQ-AENALKKLIPETPETCa 430
WP_013253822           413 F------THSEEKrsFSSGKWQIEVDAaTGALLRCYHGGSRLELASPGEPFCRYRYHVHDHREFSRFFSSYLLPDESHH- 485 Sedim...
EGD78368               445 Ysq---vADVTKE--MRVGGFVVSFNAtTGAIASLVHASSETVLASTANQIGTFEYKVHAASEYETFFDEYAQRIDGKIp 519
jgi:AciPR4_2155        417 mh----pVRIGEV--IECPNFLLTFDA-TGAITRLQNRGSQKEWASPAHPLAVFTYQTLSLQEFTDFIALYIHSTA---- 485
PRJNA63271:OPIT5_00985 392 Vwr---sVDPAEV--FRLGMLTLQLDPeTGAIRRLTAGDSRTSLAGRRNMLGCFFRETYSKSDYERFYRSYIREEQD--- 463
WP_015734951           410 EpvqpqpIETNEL--YELGQFQVSFAA-DGSI-NRLMDRSGKAWAGEHQRLGTYMYETFGQENYDRFFKEYMTNLDIHH- 484 Paeni...
CCX37250               409 ------cVAPTSErrFQINGYQLEIVP-DGSL-QIQQTPHGKAPS--NAWLGRLEYRVYSAKTVTENLERYNRDLEHTR- 477
jgi:Closa_3207         423 Ege---tVHPFEM--ISIQDWTAAFDG-SGAV--VYLEKAGKVWI-QSGCFGRFTYETYGALNMVSEFYEYNHAFKENM- 492
CCZ36422               419 Hqq---pLAP-----IVLKDVTVTVGK-NGEITSIQKHSSGNTYV---LCLGKVEYETFGGKEVDDCYFSYGRDLSENF- 485
WP_015616661           421 Kyk---kINYNEE--CEINGYSIAVLE-DGSI-----KVHGHSLS-RPVILGKATYQLFGASTFNKWKKEYMVNLDANR- 487 Clost...
CCY68487               431 k-----kFDIANV--LTAGKWRLKISG-TGSI--EKLTCGGDEVI-RENTVCAAEYIGFNDDDYDFWLNHYSRDIEKNA- 498
WP_013253822           486 EWSLPDYTKPGLSRVAD-LRSLQFLPIRAAIWyrEGEECFTLHVCTQMPEEAVe---TYGA--------PAEVALSYQFs 553 Sedim...
EGD78368               520 SYFPKDFGKPGLYNNSI-IANTTIVHAPIKAAfvKNDSQAASVVLQLQPPNIAhlraNFGP--------PDSVWIEYSF- 589
jgi:AciPR4_2155        486 DWAYKDFGKPNIDHFG--AQTAEWHPRLRGLWtnKLPTARRILAELVIPQQPTi---AAGTvlleniapPRQLFLELLLp 560
PRJNA63271:OPIT5_00985 464 -WSRKDFTKHGLPTAVR-AATHHVSLSRLEL---HRDGDQARATLVFSPLAR-----RDGV--------PPLVCLRLEAd 525
WP_015734951           485 GWADNDFGKPGIEYVKPrPEHQRYTASLRTLHleRHADYDIVTAEMKLPEVLSn---QYGA--------PRQINVFYSFh 553 Paeni...
CCX37250               478 FWAEGDFAKPALDQVKG-LTDRSFSYTVEQV---EQKGDLLRLWLKADPQAGE----VYGA--------PRQAVVTYSF- 540
jgi:Closa_3207         493 TWSEADFSKPGLENVEG-LFNRNYSFGVRDM---RKSGATVRILLSGNPAAVT----EYGC--------PERAWIIYTF- 555
CCZ36422               486 FWSEPDFGKPGLRLEKD-IRHGIFSPCPLSI---HALENTLYITLGFAPEACE----QYGC--------PREMTTVWEFg 549
WP_015616661           488 LWAIPDFFKPGIEEAGApQHNIHFYSKVENC---TIKEKELIIELRFNDSECE----EYGC--------PRKAIMKYIFd 552 Clost...
CCY68487               499 HWAVSDFSRPLLKYVKGkYPSGRFPYRLNGAY--QTGADQVLADLQCDQSVCE----ELGA--------PRRIQILYTLk 564
WP_013253822           554 hrKP-TCL 560 Sediminispirochaeta smaragdinae
EGD78368               590 --DSsRVN 595
jgi:AciPR4_2155        561 daEP-TIQ 567
PRJNA63271:OPIT5_00985 526 sgESaALH 533
WP_015734951           554 anEP-VIE 560 Paenibacillus sp. Y412MC10
CCX37250               541 --GD-TIK 545
jgi:Closa_3207         556 --GA-ELL 560
CCZ36422               550 --KE-NIH 554
WP_015616661           553 --DK-EIY 557 Clostridium pasteurianum
CCY68487               565 --EN-GLT 569
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