Conserved Protein Domain Family
DDE_Tnp_IS1595

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pfam12762: DDE_Tnp_IS1595 
ISXO2-like transposase domain
This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.
Statistics
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PSSM-Id: 403843
View PSSM: pfam12762
Aligned: 31 rows
Threshold Bit Score: 116.266
Threshold Setting Gi: 170586756
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7VL69        138 PLSGEVDMGGTYIHPAPrkaNKKADRIDYRLKEnqNPNKRCVVVAREHFsadeka---enslyRGAKRSHVFVTYSETQS 214 [Haemophilus] ...
Q72EJ4        144 QLLGPETGLGAYLKGRK--------LTGLPSSH--GRGPVPVFGILERN--------------G---WVFIDLVSGLSAE 196 Desulfovibrio ...
Q314Y1        122 QLLGPETGLGSFLRNRK--------LTGDPDSG--GRGTVPVFGILERN--------------G---WLFIDLVSGMSAE 174 Desulfovibrio ...
Q2SM06        135 KLAGfIEVDDAYLGGER---AG-----GKRGRG--ADAKTPFVAAVETTs------------eGHPTRIRLSVVKGFKTQ 192 Hahella chejue...
jgi:Glov_2666 138 VLSDrVEVDDAYLGGEL---PG-----GKVGRG--SENKVPFIAAVQTNn------------qGHPLYAVFSTVKSFCKE 195 Geobacter lovl...
jgi:Gura_2509 137 ILLGrVEVDDAYLGGEN---PG-----GKAGRG--SENKTPFIAAVETNe------------kGHPLRAVFTKVPAFNRE 194 Geobacter uran...
jgi:Acry_3539 142 tpqEHVEVDETWVGGRT----------RGDGRG--VHHKVLVACAVEVRhrkpgtkldnrkdgRYAGRVRLAVVPDRSAN 209 Acidiphilium c...
jgi:Mvan_1956  51 lLSDVVEVDESFVGGRA---------TGKLGAS---TSKAPVMIAVENLgpqv-------nrkLRLGRVRLGVADSPGSK 111 Mycolicibacter...
Q128G2        155 RLKGlVEVDETYLAISD---RQQPISAVGRKSR---TSKVLVVMAVEILq------------pKGFGRIRLHRIANDSDE 216 Polaromonas sp...
jgi:Ajs_2804  139 KLKGLVEVDETYLSITD---RKNPATPAGRKSS---TTKVLMVMAVEIVe------------pKGFGRIRLRRIDRDAAT 200 Acidovorax sp....
Q7VL69        215 VVKNFA----HAYIEKNSRINTDENTAYESLLLD-YDLRTVNHKDEYRSDFG-VTNNQAESFFSRFKRMYYGHVHKMS-N 287 [Haemophilus] ...
Q72EJ4        197 TVFHFNhsfhLRIERAGYLVHTAPYRQYDALVLSgDDSLPYEYIRKV---ET-PPSQRREGVFTRYAVERIKAFKGVS-P 271 Desulfovibrio ...
Q314Y1        175 TVFHFNhsfhLKVERAGNLIWTDRYRHYDALVFCgDDSLPYEYLRRH---DRpVAVECGTGFWAFAEKRLK-LFKGIT-P 249 Desulfovibrio ...
Q2SM06        193 EILNWS----QKYLEVGSTVISDGLACFNAVSEIgCAHDRIVCGGGRASVEE-PEFYWVNTVLGNLKTSLRSTYHAVR-S 266 Hahella chejue...
jgi:Glov_2666 196 EVEIWA----KSFLAPSALIVSDGLWCFQAVEAAgCVHQREVVGKDRKSTSM-KCFSWINTVLGNLKNSITGTYHAFDfE 270 Geobacter lovl...
jgi:Gura_2509 195 VVTEWA----KRSLSASATVVSDGLACFRAVTEAgCFHTPTIVGKKRKSTDI-VCFNWVNTILGNLKTSISGTYHAFDfE 269 Geobacter uran...
jgi:Acry_3539 210 SLCGFV----ENAVAPGSLIVTDDWSGYAGLGRRgFDHHAIAECGDPEV-AE-EFLPIVHLVFTNLKTWINGIHHGVS-A 282 Acidiphilium c...
jgi:Mvan_1956 112 QLVDFA----RTTVEPGSVIRTDGARMFRTLASEgFKHEYISGYSSPEP-GH-VTLPGPHRVASLLKRWNAGTHHYRVeR 185 Mycolicibacter...
Q128G2        217 CVVPFV----QQSVEPGAQIRTDGSAAYRSLSELgYDHERTVMLGSDVP-AH-VSMAGVHRVASLVKRWILGTHHGSVqP 290 Polaromonas sp...
jgi:Ajs_2804  201 HVIPFV----QEVVEPGAQVRTDGSAAYRALGELgYTHQRTVMLGSGVP-AH-VSMAGVHRVASLVQRWVLGTHHGSVqP 274 Acidovorax sp....
Q7VL69        288 TYLLNYANEIAYRED 302 [Haemophilus] ducreyi
Q72EJ4        272 QRFPLYLKELEFRYN 286 Desulfovibrio vulgaris str. Hildenborough
Q314Y1        250 RRFPLYLKELEFRYN 264 Desulfovibrio alaskensis G20
Q2SM06        267 KYAQRYLSEFQYRFN 281 Hahella chejuensis KCTC 2396
jgi:Glov_2666 271 KYAYRYLGEFQYRFN 285 Geobacter lovleyi SZ
jgi:Gura_2509 270 KYGTRYLAEVQYRFN 284 Geobacter uraniireducens Rf4
jgi:Acry_3539 283 KHLQAYLNEFTFRFN 297 Acidiphilium cryptum JF-5
jgi:Mvan_1956 186 EHLQYYLDEFTFRFN 200 Mycolicibacterium vanbaalenii PYR-1
Q128G2        291 EHLDAYLDEFVFRFN 305 Polaromonas sp. JS666
jgi:Ajs_2804  275 DHLDAYLDEFVFRFN 289 Acidovorax sp. JS42
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