4HQB


Conserved Protein Domain Family
DdrB

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pfam12747: DdrB 
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DdrB-like protein
This family includes the Deinococcus DdrB protein which is a ssDNA binding protein. This family also includes some possibly distantly related cyanobacterial proteins. However, these are not strongly supported. The structure of DdrB is known.
Statistics
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PSSM-Id: 372287
Aligned: 7 rows
Threshold Bit Score: 148.821
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4HQB_E             13 DLGARVTVNVEHESRLLDVQRHYGRLGWTSGEIPSG----------------------GYQFPIENEADFDWSLIGARKW 70  Deinococcu...
jgi:Cyan7822_6453  14 SLLNPVVSILQGLRELFVLVREVKNLLAQQNELLKQnnellqnlldkenssnqvevnpNFQAGLSDYPTFDWAKIGATVI 93 
WP_014683760        9 DLGARVSVEVESADKLLEVQRQYGRLGWTSGEVPQG----------------------GYLFPLDNEQDFDWSLIGARKF 66  Deinococcu...
jgi:Deipr_2350      9 DLGAKVTVDVERPEQVLDIQRHYGRLGWTSGEVPAG----------------------GYQFPLDNSDDFDWALIGAREW 66 
WP_015236121        9 DLGAKVTVDVEGPETLLDVQRRYGKQGWYSGDVPAG----------------------GFQFPLDNEADFDWSLLGGRKF 66  Deinococcu...
jgi:Ocepr_2297     10 PIGVPVEAELEDGEDLYAVLRERGAAGWTAVRLRYQ----------------------GIVLPLACERCFDWRLLGAKVV 67 
jgi:PCC7424_5469   14 TLLNPVVSIYKGTQNLWVLLRDVKNLLNRQNQLLEKnnelleqlltkeitsnteefepNFKAMLNEYKNFDWDTIEARVI 93 
4HQB_E             71 KS-PEGEELVIHRGHAYRRRELEAVDSRKlklpAAIKYSRGAKVSDpqhvrekadGDIEYVSLAIFRGG 138 Deinococcus radiodurans
jgi:Cyan7822_6453  94 STdSDGPTVVEYEGLAFKRRRSSIDDVKG----AAIWFSCSQKDNK---------DQLTYLRLITFKEQ 149
WP_014683760       67 TN-NEGEDMVMHRGHAYRRRELEAVDSRKlklpAAIKYSRGAKNTDpehvrekadGEFEYVTLAIFRGG 134 Deinococcus gobiensis
jgi:Deipr_2350     67 TN-PEGETMILHRGHAYRRRELEAVDSRKlklpKAVKYSRGAKPTDpehlrekgdGEIEYVTLAMFRGG 134
WP_015236121       67 VL-EDGEEAVYCRGSVWKRRELAAVDTRKlrlpAAVKYSRGARPTDpehlreksdGDIEYVTLAIFRSG 134 Deinococcus peraridil...
jgi:Ocepr_2297     68 ES-GGFVEAVTLGGAVYKRRDLA----ERrdlpRVIKYSRGAREGDpphlvegsnQD-RYVTLVRFVge 130
jgi:PCC7424_5469   94 SSdGEGVTVVQYRGKVFERRRSSVDDVKG----AAIWFSSATKTPD---------GKVKYLKLITFREK 149
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