Conserved Protein Domain Family
Cnd1

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pfam12717: Cnd1 
non-SMC mitotic condensation complex subunit 1
The three non-SMC (structural maintenance of chromosomes) subunits of the mitotic condensation complex are Cnd1-3. The whole complex is essential for viability and the condensing of chromosomes in mitosis.
Statistics
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PSSM-Id: 403807
View PSSM: pfam12717
Aligned: 150 rows
Threshold Bit Score: 75.574
Threshold Setting Gi: 198431395
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002516933         887 ALRNNLVVTMAdfCVRYTALVDCYISKITKCLRDPCELVRRQTFILLSRLLQMDYVKWRGvLFLRFLLSLVDESAKIRQL 966  castor...
EFA84988             773 NVKCNIIIGLGdlVVRFPNLIEPYSKHIYERLRDANADVRNTTVMVLTHLILNGMLKPKS-HISEMAICIEDAEPMVQQN 851  Hetero...
EFA02834            1024 DIRSTISMHCVdlLTRFPNIIDPWSPRLSEMLKDSVAEVRKNAFFSLSNLILRDMIRASS-RISEMAVCLIDPDPEVSQL 1102 red fl...
XP_013934390         949 VVRSNAVLGLGdmAVCFNNVIDTSKDFLYGRLQDKDIMVQRTCLMTVTFLILAGQVKVKG-QLAQMAKLYVNEDPGIVDM 1027 Ogatae...
O94679               976 IIRNNLVIGLAdlTVCFNHFIDEISEYLYRRLMDEESSVKKTCFMTLAFLILAGQIKVKG-QLGIMARSLEDEDARISDL 1054 Schizo...
WGS:AATM:SJAG_03161  966 LVRNNLVIGLAdlTMCFNQYIDQNSEYLYRRLSDDEPSVKKTCFMTLAFLILAGQIKIKG-QLGIMARCLEDKDPRVSSL 1044 Schizo...
Q233H3              1080 IVKTNILIGIGdlYHRYPIILERYLHFVYKSLSDKDVRVRKTCLMVITHLVLNDMLKVKA-EISSIAILIEDSDQRIQNM 1158 Tetrah...
XP_001032820        1034 LLKINIIVSIGdlLHKYPNLVEPYNSKIFAKLHDPDVQVRKTTMMVLTHLILNDMMKIRG-EICEVALLLEDEEPKIQNI 1112 Tetrah...
A0C9H4               883 VMKNNVIISIGdlLHRWPNTIQKFHKQIYSNLSDTSAAVRRVTLLVLTHLILNDMVKSKT-SLSHIPILLNDPHPQIPAM 961  Parame...
A0BCL6               885 VVKNNVLISIGdlLHMWPNTVQKFHKQIYSNLLDSNGPLRRVTLLVLTHLILNDMIKSKT-SLSHIPVLLNDPCQQIQSM 963  Parame...
XP_002516933         967 SDFLFGSILKVkAPLLAYNSFVEAIYVLNDcnahnglggS--KnsqtenrlfsirgsdeNARAKRMHVYVSLLKQMAPEH 1044 castor...
EFA84988             852 TKLFFTNLSQK-G-NELYNYLPEVISKLTT---------D--Tti-------------lMSNDKIREILKFMFSFITKDR 905  Hetero...
EFA02834            1103 CRSFFTKIAQK-DNNNIVSLIPDIFSYLV----------KqeE----------------ITEADLRYVIKFLFDLIDVPK 1155 red fl...
XP_013934390        1028 CKLFFTELATK-D-NAIYNGFIDMFSGLA----------AdfE----------------LSRKSFKEIIKFVVPFLDKDK 1079 Ogatae...
O94679              1055 ARMFFTDFAAK-D-NSVYNNFIDIFSVLSR---------SaeEq--------------dEDDAKFKRIIRFLTSFIEKER 1109 Schizo...
WGS:AATM:SJAG_03161 1045 AHMFFSELSAK-D-NAVYNNFIDIFSVLSK---------SaeEl--------------dADDSMFKRIIKFLMSFIEKEK 1099 Schizo...
Q233H3              1159 VKLFFHELNKK-DPKAIYNLLPELIGRLSt-----------eN----------------INESIFNNFCENVLPHIDKDK 1210 Tetrah...
XP_001032820        1113 VKLFLHELHKK-DQKIIYNLLPEAIGRMSR---------QdkTelg-----------apIHEKTFENFAKNIMQYLEKDK 1171 Tetrah...
A0C9H4               962 ARYFLNELQKK-EQRAITNAIPDIISNVQ---------------------------------DQNENVLSQISQYIDKSQ 1007 Parame...
A0BCL6               964 ARYFLNELQKK-EQRAISNAVPDIILNIH---------------------------------EHNEIIISQISLYIDKNL 1009 Parame...
XP_002516933        1045 L-LATFAKLCAEILAAASDGmlsiediagqaVLQDAFQILA 1084 castor bean
EFA84988             906 QnESLIERIVQRFKTAQNIT-----------EAQNISYCLQ 935  Heterostelium album PN500
EFA02834            1156 RpENLVDRLCHKYTPDENVR-----------LNRNITYCLS 1185 red flour beetle
XP_013934390        1080 HkQQLVGKLYQRLIKVDDEE-----------QWNDLVFVIK 1109 Ogataea parapolymorpha DL-1
O94679              1110 HtKQLAERLAARLDRCKTQR-----------QWDHVVYALS 1139 Schizosaccharomyces pombe 972h-
WGS:AATM:SJAG_03161 1100 FtRQLAERLASRLNKCSSKR-----------QWDQVVYALS 1129 Schizosaccharomyces japonicus yFS275
Q233H3              1211 QaESLVDKLCQRFTLVNTEK-----------EWINISHALK 1240 Tetrahymena thermophila SB210
XP_001032820        1172 YsETLVEKLCVRFQNSQNQR-----------EWRNCSFCLS 1201 Tetrahymena thermophila SB210
A0C9H4              1008 I-ESIVDKLITILGTSTNQY-----------EIKNISILFN 1036 Paramecium tetraurelia
A0BCL6              1010 V-ESIVEKLVNILGISQNQS-----------EIKNISILFN 1038 Paramecium tetraurelia
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